Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CBX1P83916 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.7■□□□□ 0.74
CBX1P83916 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CBX1P83916 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CBX1P83916 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CBX1P83916 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CBX1P83916 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CBX1P83916 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CBX1P83916 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
CBX1P83916 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC19.69■□□□□ 0.74
CBX1P83916 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CBX1P83916 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.69■□□□□ 0.74
CBX1P83916 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC19.69■□□□□ 0.74
CBX1P83916 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CBX1P83916 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CBX1P83916 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CBX1P83916 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.69■□□□□ 0.74
CBX1P83916 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.69■□□□□ 0.74
CBX1P83916 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.69■□□□□ 0.74
CBX1P83916 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
CBX1P83916 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CBX1P83916 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.69■□□□□ 0.74
CBX1P83916 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CBX1P83916 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.69■□□□□ 0.74
CBX1P83916 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.69■□□□□ 0.74
CBX1P83916 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CBX1P83916 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CBX1P83916 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CBX1P83916 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.69■□□□□ 0.74
CBX1P83916 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CBX1P83916 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.69■□□□□ 0.74
CBX1P83916 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CBX1P83916 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.68■□□□□ 0.74
CBX1P83916 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CBX1P83916 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.68■□□□□ 0.74
CBX1P83916 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CBX1P83916 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
CBX1P83916 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CBX1P83916 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.68■□□□□ 0.74
CBX1P83916 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CBX1P83916 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CBX1P83916 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CBX1P83916 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CBX1P83916 MTDHP2-201ENST00000601468 714 ntBASIC19.68■□□□□ 0.74
CBX1P83916 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CBX1P83916 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
CBX1P83916 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.68■□□□□ 0.74
CBX1P83916 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CBX1P83916 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CBX1P83916 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CBX1P83916 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.68■□□□□ 0.74
CBX1P83916 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.68■□□□□ 0.74
CBX1P83916 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CBX1P83916 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.68■□□□□ 0.74
CBX1P83916 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CBX1P83916 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.68■□□□□ 0.74
CBX1P83916 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.68■□□□□ 0.74
CBX1P83916 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CBX1P83916 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CBX1P83916 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CBX1P83916 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.67■□□□□ 0.74
CBX1P83916 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CBX1P83916 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CBX1P83916 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CBX1P83916 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC19.67■□□□□ 0.74
CBX1P83916 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CBX1P83916 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.67■□□□□ 0.74
CBX1P83916 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CBX1P83916 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CBX1P83916 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CBX1P83916 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.67■□□□□ 0.74
CBX1P83916 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CBX1P83916 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.67■□□□□ 0.74
CBX1P83916 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.67■□□□□ 0.74
CBX1P83916 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.67■□□□□ 0.74
CBX1P83916 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.67■□□□□ 0.74
CBX1P83916 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CBX1P83916 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CBX1P83916 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.67■□□□□ 0.74
CBX1P83916 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC19.67■□□□□ 0.74
CBX1P83916 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CBX1P83916 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CBX1P83916 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CBX1P83916 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.67■□□□□ 0.74
CBX1P83916 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CBX1P83916 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC19.67■□□□□ 0.74
CBX1P83916 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.67■□□□□ 0.74
CBX1P83916 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.67■□□□□ 0.74
CBX1P83916 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CBX1P83916 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CBX1P83916 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.67■□□□□ 0.74
CBX1P83916 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CBX1P83916 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CBX1P83916 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CBX1P83916 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.66■□□□□ 0.74
CBX1P83916 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.66■□□□□ 0.74
CBX1P83916 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
CBX1P83916 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CBX1P83916 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CBX1P83916 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms