Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC15.15■□□□□ 0.02
CX3CL1P78423 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC15.15■□□□□ 0.02
CX3CL1P78423 AC020916.1-201ENST00000587762 1774 ntBASIC15.15■□□□□ 0.02
CX3CL1P78423 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CX3CL1P78423 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CL1P78423 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CL1P78423 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC15.15■□□□□ 0.02
CX3CL1P78423 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CL1P78423 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CL1P78423 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC15.15■□□□□ 0.02
CX3CL1P78423 FP475955.4-201ENST00000623131 1990 ntBASIC15.15■□□□□ 0.02
CX3CL1P78423 FEM1AP3-201ENST00000403722 1741 ntBASIC15.14■□□□□ 0.01
CX3CL1P78423 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC15.14■□□□□ 0.01
CX3CL1P78423 FSCN1P1-201ENST00000568912 1481 ntBASIC15.14■□□□□ 0.01
CX3CL1P78423 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CX3CL1P78423 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CX3CL1P78423 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.14■□□□□ 0.01
CX3CL1P78423 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CX3CL1P78423 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CX3CL1P78423 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CX3CL1P78423 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CX3CL1P78423 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CX3CL1P78423 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC15.14■□□□□ 0.01
CX3CL1P78423 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CX3CL1P78423 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
CX3CL1P78423 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CX3CL1P78423 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC15.14■□□□□ 0.01
CX3CL1P78423 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.14■□□□□ 0.01
CX3CL1P78423 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC15.14■□□□□ 0.01
CX3CL1P78423 AC011506.1-201ENST00000474329 610 ntBASIC15.14■□□□□ 0.01
CX3CL1P78423 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CX3CL1P78423 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.14■□□□□ 0.01
CX3CL1P78423 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC15.14■□□□□ 0.01
CX3CL1P78423 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC15.14■□□□□ 0.01
CX3CL1P78423 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC15.14■□□□□ 0.01
CX3CL1P78423 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CX3CL1P78423 UBQLN4P1-201ENST00000461599 1801 ntBASIC15.14■□□□□ 0.01
CX3CL1P78423 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CX3CL1P78423 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CX3CL1P78423 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CX3CL1P78423 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CX3CL1P78423 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CX3CL1P78423 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC15.14■□□□□ 0.01
CX3CL1P78423 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.14■□□□□ 0.01
CX3CL1P78423 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CX3CL1P78423 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CX3CL1P78423 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC15.14■□□□□ 0.01
CX3CL1P78423 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.14■□□□□ 0.01
CX3CL1P78423 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CX3CL1P78423 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CX3CL1P78423 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CX3CL1P78423 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CX3CL1P78423 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CX3CL1P78423 LTB4R2-202ENST00000528054 3092 ntBASIC15.13■□□□□ 0.01
CX3CL1P78423 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CX3CL1P78423 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
CX3CL1P78423 GOLGA6L5P-202ENST00000515341 1828 ntBASIC15.13■□□□□ 0.01
CX3CL1P78423 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CX3CL1P78423 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CX3CL1P78423 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CX3CL1P78423 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CX3CL1P78423 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CX3CL1P78423 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CX3CL1P78423 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CX3CL1P78423 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CX3CL1P78423 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CX3CL1P78423 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CX3CL1P78423 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CX3CL1P78423 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CX3CL1P78423 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC15.13■□□□□ 0.01
CX3CL1P78423 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC15.13■□□□□ 0.01
CX3CL1P78423 AL355355.2-201ENST00000442321 338 ntBASIC15.13■□□□□ 0.01
CX3CL1P78423 B3GAT3P1-201ENST00000471720 806 ntBASIC15.13■□□□□ 0.01
CX3CL1P78423 NUDT16P1-203ENST00000513809 620 ntBASIC15.13■□□□□ 0.01
CX3CL1P78423 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.13■□□□□ 0.01
CX3CL1P78423 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC15.13■□□□□ 0.01
CX3CL1P78423 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC15.13■□□□□ 0.01
CX3CL1P78423 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC15.13■□□□□ 0.01
CX3CL1P78423 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CX3CL1P78423 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CX3CL1P78423 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CX3CL1P78423 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.13■□□□□ 0.01
CX3CL1P78423 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CX3CL1P78423 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CX3CL1P78423 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CX3CL1P78423 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CX3CL1P78423 GAS2L1P1-201ENST00000420145 1480 ntBASIC15.13■□□□□ 0.01
CX3CL1P78423 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC15.13■□□□□ 0.01
CX3CL1P78423 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CX3CL1P78423 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CX3CL1P78423 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CX3CL1P78423 AC020763.4-201ENST00000623414 4170 ntBASIC15.13■□□□□ 0.01
CX3CL1P78423 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CX3CL1P78423 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CX3CL1P78423 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CX3CL1P78423 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
CX3CL1P78423 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CX3CL1P78423 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CX3CL1P78423 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CX3CL1P78423 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms