Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CDH11P55287 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDH11P55287 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDH11P55287 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.22■□□□□ 0.35
CDH11P55287 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.22■□□□□ 0.35
CDH11P55287 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDH11P55287 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.22■□□□□ 0.35
CDH11P55287 AL121829.2-201ENST00000620908 328 ntBASIC17.22■□□□□ 0.35
CDH11P55287 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH11P55287 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.22■□□□□ 0.35
CDH11P55287 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDH11P55287 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDH11P55287 AL354751.1-201ENST00000412768 1863 ntBASIC17.22■□□□□ 0.35
CDH11P55287 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH11P55287 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.22■□□□□ 0.35
CDH11P55287 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH11P55287 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH11P55287 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH11P55287 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDH11P55287 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDH11P55287 KRT8P8-201ENST00000434750 1448 ntBASIC17.21■□□□□ 0.35
CDH11P55287 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDH11P55287 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.21■□□□□ 0.35
CDH11P55287 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH11P55287 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.21■□□□□ 0.35
CDH11P55287 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH11P55287 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH11P55287 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH11P55287 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH11P55287 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDH11P55287 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH11P55287 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.21■□□□□ 0.35
CDH11P55287 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CDH11P55287 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH11P55287 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.21■□□□□ 0.35
CDH11P55287 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDH11P55287 AC233702.5-201ENST00000584107 538 ntBASIC17.21■□□□□ 0.35
CDH11P55287 AP001412.1-201ENST00000608405 714 ntBASIC17.21■□□□□ 0.35
CDH11P55287 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CDH11P55287 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH11P55287 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH11P55287 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CDH11P55287 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH11P55287 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CDH11P55287 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CDH11P55287 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.21■□□□□ 0.34
CDH11P55287 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CDH11P55287 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH11P55287 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.2■□□□□ 0.34
CDH11P55287 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CDH11P55287 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH11P55287 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.2■□□□□ 0.34
CDH11P55287 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.2■□□□□ 0.34
CDH11P55287 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH11P55287 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH11P55287 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.2■□□□□ 0.34
CDH11P55287 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH11P55287 RPS2P55-201ENST00000397318 883 ntBASIC17.2■□□□□ 0.34
CDH11P55287 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CDH11P55287 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.2■□□□□ 0.34
CDH11P55287 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDH11P55287 AC107956.1-201ENST00000494359 873 ntBASIC17.2■□□□□ 0.34
CDH11P55287 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.2■□□□□ 0.34
CDH11P55287 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.2■□□□□ 0.34
CDH11P55287 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.2■□□□□ 0.34
CDH11P55287 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.2■□□□□ 0.34
CDH11P55287 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.2■□□□□ 0.34
CDH11P55287 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH11P55287 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.2■□□□□ 0.34
CDH11P55287 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH11P55287 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH11P55287 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CDH11P55287 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDH11P55287 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDH11P55287 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.2■□□□□ 0.34
CDH11P55287 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.2■□□□□ 0.34
CDH11P55287 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CDH11P55287 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH11P55287 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.2■□□□□ 0.34
CDH11P55287 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDH11P55287 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.19■□□□□ 0.34
CDH11P55287 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDH11P55287 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH11P55287 FEM1AP3-201ENST00000403722 1741 ntBASIC17.19■□□□□ 0.34
CDH11P55287 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDH11P55287 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH11P55287 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDH11P55287 AL133373.2-201ENST00000623187 2828 ntBASIC17.19■□□□□ 0.34
CDH11P55287 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH11P55287 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CDH11P55287 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH11P55287 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CDH11P55287 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH11P55287 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH11P55287 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH11P55287 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.19■□□□□ 0.34
CDH11P55287 YBX1P10-201ENST00000444752 975 ntBASIC17.19■□□□□ 0.34
CDH11P55287 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.19■□□□□ 0.34
CDH11P55287 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.19■□□□□ 0.34
CDH11P55287 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms