Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC33.2■■■□□ 2.91
NCAPD3P42695 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
NCAPD3P42695 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
NCAPD3P42695 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC33.2■■■□□ 2.9
NCAPD3P42695 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.9
NCAPD3P42695 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
NCAPD3P42695 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC33.19■■■□□ 2.9
NCAPD3P42695 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC33.19■■■□□ 2.9
NCAPD3P42695 GZMM-202ENST00000592501 941 ntTSL 3 BASIC33.19■■■□□ 2.9
NCAPD3P42695 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC33.19■■■□□ 2.9
NCAPD3P42695 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
NCAPD3P42695 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
NCAPD3P42695 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC33.19■■■□□ 2.9
NCAPD3P42695 AC034236.2-201ENST00000606662 1610 ntBASIC33.19■■■□□ 2.9
NCAPD3P42695 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
NCAPD3P42695 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC33.19■■■□□ 2.9
NCAPD3P42695 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC33.19■■■□□ 2.9
NCAPD3P42695 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC33.18■■■□□ 2.9
NCAPD3P42695 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
NCAPD3P42695 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC33.18■■■□□ 2.9
NCAPD3P42695 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC33.18■■■□□ 2.9
NCAPD3P42695 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC33.18■■■□□ 2.9
NCAPD3P42695 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
NCAPD3P42695 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC33.18■■■□□ 2.9
NCAPD3P42695 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
NCAPD3P42695 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC33.18■■■□□ 2.9
NCAPD3P42695 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC33.18■■■□□ 2.9
NCAPD3P42695 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
NCAPD3P42695 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC33.18■■■□□ 2.9
NCAPD3P42695 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC33.18■■■□□ 2.9
NCAPD3P42695 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC33.18■■■□□ 2.9
NCAPD3P42695 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC33.18■■■□□ 2.9
NCAPD3P42695 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC33.18■■■□□ 2.9
NCAPD3P42695 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
NCAPD3P42695 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
NCAPD3P42695 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC33.18■■■□□ 2.9
NCAPD3P42695 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC33.18■■■□□ 2.9
NCAPD3P42695 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
NCAPD3P42695 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
NCAPD3P42695 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
NCAPD3P42695 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC33.17■■■□□ 2.9
NCAPD3P42695 THAP5-204ENST00000438865 868 ntTSL 2 BASIC33.17■■■□□ 2.9
NCAPD3P42695 DHDH-204ENST00000523250 634 ntTSL 5 BASIC33.17■■■□□ 2.9
NCAPD3P42695 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC33.17■■■□□ 2.9
NCAPD3P42695 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC33.17■■■□□ 2.9
NCAPD3P42695 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC33.17■■■□□ 2.9
NCAPD3P42695 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
NCAPD3P42695 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC33.16■■■□□ 2.9
NCAPD3P42695 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC33.16■■■□□ 2.9
NCAPD3P42695 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC33.16■■■□□ 2.9
NCAPD3P42695 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC33.16■■■□□ 2.9
NCAPD3P42695 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC33.16■■■□□ 2.9
NCAPD3P42695 AC006333.2-201ENST00000607957 2099 ntBASIC33.16■■■□□ 2.9
NCAPD3P42695 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
NCAPD3P42695 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
NCAPD3P42695 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC33.16■■■□□ 2.9
NCAPD3P42695 RCN1P2-201ENST00000398357 915 ntBASIC33.16■■■□□ 2.9
NCAPD3P42695 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC33.16■■■□□ 2.9
NCAPD3P42695 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC33.16■■■□□ 2.9
NCAPD3P42695 Z83851.2-201ENST00000609564 659 ntBASIC33.16■■■□□ 2.9
NCAPD3P42695 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
NCAPD3P42695 AL512408.1-201ENST00000569378 2000 ntBASIC33.16■■■□□ 2.9
NCAPD3P42695 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC33.15■■■□□ 2.9
NCAPD3P42695 CYP51A1P1-201ENST00000492267 1507 ntBASIC33.15■■■□□ 2.9
NCAPD3P42695 MED16-201ENST00000269814 1199 ntTSL 5 BASIC33.15■■■□□ 2.9
NCAPD3P42695 AC112482.1-201ENST00000492080 688 ntBASIC33.15■■■□□ 2.9
NCAPD3P42695 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC33.15■■■□□ 2.9
NCAPD3P42695 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
NCAPD3P42695 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
NCAPD3P42695 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC33.14■■■□□ 2.9
NCAPD3P42695 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
NCAPD3P42695 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
NCAPD3P42695 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
NCAPD3P42695 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
NCAPD3P42695 AC021087.4-201ENST00000563761 564 ntBASIC33.14■■■□□ 2.9
NCAPD3P42695 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
NCAPD3P42695 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
NCAPD3P42695 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC33.14■■■□□ 2.9
NCAPD3P42695 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
NCAPD3P42695 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC33.14■■■□□ 2.9
NCAPD3P42695 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC33.13■■■□□ 2.89
NCAPD3P42695 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC33.13■■■□□ 2.89
NCAPD3P42695 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC33.13■■■□□ 2.89
NCAPD3P42695 AC004832.2-201ENST00000426397 482 ntBASIC33.13■■■□□ 2.89
NCAPD3P42695 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
NCAPD3P42695 AC012640.2-201ENST00000561606 901 ntBASIC33.13■■■□□ 2.89
NCAPD3P42695 AC040169.1-201ENST00000565382 521 ntBASIC33.13■■■□□ 2.89
NCAPD3P42695 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC33.13■■■□□ 2.89
NCAPD3P42695 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
NCAPD3P42695 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC33.13■■■□□ 2.89
NCAPD3P42695 MTDHP3-201ENST00000594186 672 ntBASIC33.13■■■□□ 2.89
NCAPD3P42695 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC33.13■■■□□ 2.89
NCAPD3P42695 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC33.13■■■□□ 2.89
NCAPD3P42695 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC33.13■■■□□ 2.89
NCAPD3P42695 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
NCAPD3P42695 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
NCAPD3P42695 KRT8P32-201ENST00000512863 1461 ntBASIC33.13■■■□□ 2.89
NCAPD3P42695 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
NCAPD3P42695 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC33.13■■■□□ 2.89
NCAPD3P42695 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC33.13■■■□□ 2.89
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms