Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.8■□□□□ 0.76
RFC1P35251 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFC1P35251 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
RFC1P35251 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.8■□□□□ 0.76
RFC1P35251 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.8■□□□□ 0.76
RFC1P35251 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFC1P35251 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.8■□□□□ 0.76
RFC1P35251 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
RFC1P35251 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RFC1P35251 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFC1P35251 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.8■□□□□ 0.76
RFC1P35251 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RFC1P35251 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFC1P35251 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFC1P35251 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RFC1P35251 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.8■□□□□ 0.76
RFC1P35251 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.8■□□□□ 0.76
RFC1P35251 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFC1P35251 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.8■□□□□ 0.76
RFC1P35251 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.8■□□□□ 0.76
RFC1P35251 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.8■□□□□ 0.76
RFC1P35251 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFC1P35251 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
RFC1P35251 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RFC1P35251 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFC1P35251 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFC1P35251 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFC1P35251 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.79■□□□□ 0.76
RFC1P35251 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RFC1P35251 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RFC1P35251 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RFC1P35251 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.79■□□□□ 0.76
RFC1P35251 HEIH-201ENST00000623091 1652 ntBASIC19.79■□□□□ 0.76
RFC1P35251 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
RFC1P35251 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.79■□□□□ 0.76
RFC1P35251 MFAP1P1-201ENST00000442257 1255 ntBASIC19.79■□□□□ 0.76
RFC1P35251 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.79■□□□□ 0.76
RFC1P35251 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.79■□□□□ 0.76
RFC1P35251 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFC1P35251 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFC1P35251 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFC1P35251 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.79■□□□□ 0.76
RFC1P35251 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFC1P35251 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.79■□□□□ 0.76
RFC1P35251 KRT8P32-201ENST00000512863 1461 ntBASIC19.79■□□□□ 0.76
RFC1P35251 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFC1P35251 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFC1P35251 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFC1P35251 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFC1P35251 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.79■□□□□ 0.76
RFC1P35251 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFC1P35251 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFC1P35251 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFC1P35251 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.78■□□□□ 0.76
RFC1P35251 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RFC1P35251 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.78■□□□□ 0.76
RFC1P35251 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.78■□□□□ 0.76
RFC1P35251 AIRN-201ENST00000601203 4374 ntBASIC19.78■□□□□ 0.76
RFC1P35251 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RFC1P35251 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFC1P35251 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
RFC1P35251 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RFC1P35251 SNORA78-201ENST00000459373 127 ntBASIC19.78■□□□□ 0.76
RFC1P35251 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.78■□□□□ 0.76
RFC1P35251 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.78■□□□□ 0.76
RFC1P35251 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.78■□□□□ 0.76
RFC1P35251 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.78■□□□□ 0.76
RFC1P35251 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RFC1P35251 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFC1P35251 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.78■□□□□ 0.76
RFC1P35251 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
RFC1P35251 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.78■□□□□ 0.76
RFC1P35251 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFC1P35251 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.78■□□□□ 0.76
RFC1P35251 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.78■□□□□ 0.76
RFC1P35251 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFC1P35251 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFC1P35251 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RFC1P35251 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.77■□□□□ 0.76
RFC1P35251 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFC1P35251 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RFC1P35251 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.77■□□□□ 0.76
RFC1P35251 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.77■□□□□ 0.76
RFC1P35251 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFC1P35251 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.77■□□□□ 0.76
RFC1P35251 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFC1P35251 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFC1P35251 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
RFC1P35251 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFC1P35251 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.77■□□□□ 0.76
RFC1P35251 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RFC1P35251 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.77■□□□□ 0.76
RFC1P35251 CRYGFP-201ENST00000418459 633 ntBASIC19.77■□□□□ 0.76
RFC1P35251 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.77■□□□□ 0.76
RFC1P35251 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RFC1P35251 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.77■□□□□ 0.76
RFC1P35251 MIR4785-201ENST00000585005 73 ntBASIC19.77■□□□□ 0.76
RFC1P35251 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
RFC1P35251 AC068587.9-201ENST00000641814 219 ntBASIC19.77■□□□□ 0.76
RFC1P35251 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms