Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 PPOX-214ENST00000535223 664 ntTSL 3 BASIC22.55■■□□□ 1.2
COL4A5P29400 AC106730.1-201ENST00000566722 1090 ntBASIC22.55■■□□□ 1.2
COL4A5P29400 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC22.55■■□□□ 1.2
COL4A5P29400 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
COL4A5P29400 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC22.55■■□□□ 1.2
COL4A5P29400 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC22.55■■□□□ 1.2
COL4A5P29400 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC22.55■■□□□ 1.2
COL4A5P29400 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL4A5P29400 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC22.55■■□□□ 1.2
COL4A5P29400 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL4A5P29400 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL4A5P29400 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
COL4A5P29400 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL4A5P29400 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL4A5P29400 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC22.55■■□□□ 1.2
COL4A5P29400 AC009065.1-201ENST00000564055 1225 ntBASIC22.55■■□□□ 1.2
COL4A5P29400 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
COL4A5P29400 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC22.55■■□□□ 1.2
COL4A5P29400 AC024563.2-201ENST00000603282 481 ntBASIC22.55■■□□□ 1.2
COL4A5P29400 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
COL4A5P29400 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL4A5P29400 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL4A5P29400 TREX1-205ENST00000625293 1783 ntBASIC22.54■■□□□ 1.2
COL4A5P29400 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL4A5P29400 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC22.54■■□□□ 1.2
COL4A5P29400 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COL4A5P29400 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
COL4A5P29400 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC22.54■■□□□ 1.2
COL4A5P29400 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC22.54■■□□□ 1.2
COL4A5P29400 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL4A5P29400 MIR1233-2-201ENST00000408138 82 ntBASIC22.54■■□□□ 1.2
COL4A5P29400 MIR1233-1-201ENST00000408722 82 ntBASIC22.54■■□□□ 1.2
COL4A5P29400 AC073648.2-201ENST00000510116 352 ntBASIC22.54■■□□□ 1.2
COL4A5P29400 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COL4A5P29400 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC22.54■■□□□ 1.2
COL4A5P29400 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC22.54■■□□□ 1.2
COL4A5P29400 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COL4A5P29400 AL353692.3-201ENST00000407031 1396 ntBASIC22.54■■□□□ 1.2
COL4A5P29400 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC22.54■■□□□ 1.2
COL4A5P29400 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL4A5P29400 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL4A5P29400 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.53■■□□□ 1.2
COL4A5P29400 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL4A5P29400 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL4A5P29400 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL4A5P29400 GUSBP12-201ENST00000513727 720 ntBASIC22.53■■□□□ 1.2
COL4A5P29400 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC22.53■■□□□ 1.2
COL4A5P29400 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC22.53■■□□□ 1.2
COL4A5P29400 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC22.53■■□□□ 1.2
COL4A5P29400 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC22.53■■□□□ 1.2
COL4A5P29400 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC22.53■■□□□ 1.2
COL4A5P29400 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
COL4A5P29400 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC22.53■■□□□ 1.2
COL4A5P29400 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC22.53■■□□□ 1.2
COL4A5P29400 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL4A5P29400 KRT8P32-201ENST00000512863 1461 ntBASIC22.53■■□□□ 1.2
COL4A5P29400 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL4A5P29400 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC22.53■■□□□ 1.2
COL4A5P29400 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL4A5P29400 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL4A5P29400 AC005336.2-201ENST00000593183 939 ntBASIC22.52■■□□□ 1.2
COL4A5P29400 AC008608.2-201ENST00000606089 416 ntBASIC22.52■■□□□ 1.2
COL4A5P29400 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC22.52■■□□□ 1.2
COL4A5P29400 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
COL4A5P29400 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
COL4A5P29400 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL4A5P29400 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
COL4A5P29400 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
COL4A5P29400 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC22.52■■□□□ 1.2
COL4A5P29400 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL4A5P29400 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL4A5P29400 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL4A5P29400 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
COL4A5P29400 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC22.52■■□□□ 1.2
COL4A5P29400 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
COL4A5P29400 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
COL4A5P29400 AC112907.3-201ENST00000577781 2400 ntBASIC22.51■■□□□ 1.19
COL4A5P29400 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL4A5P29400 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC22.51■■□□□ 1.19
COL4A5P29400 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC22.51■■□□□ 1.19
COL4A5P29400 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC22.51■■□□□ 1.19
COL4A5P29400 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC22.51■■□□□ 1.19
COL4A5P29400 AC034236.2-201ENST00000606662 1610 ntBASIC22.51■■□□□ 1.19
COL4A5P29400 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL4A5P29400 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL4A5P29400 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL4A5P29400 VENTXP7-201ENST00000475503 772 ntBASIC22.51■■□□□ 1.19
COL4A5P29400 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC22.51■■□□□ 1.19
COL4A5P29400 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC22.51■■□□□ 1.19
COL4A5P29400 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC22.51■■□□□ 1.19
COL4A5P29400 MIR3180-4-201ENST00000582223 153 ntBASIC22.51■■□□□ 1.19
COL4A5P29400 PWWP2AP1-201ENST00000429776 2273 ntBASIC22.51■■□□□ 1.19
COL4A5P29400 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC22.51■■□□□ 1.19
COL4A5P29400 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC22.51■■□□□ 1.19
COL4A5P29400 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL4A5P29400 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL4A5P29400 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
COL4A5P29400 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL4A5P29400 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL4A5P29400 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms