Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLTAP09496 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLTAP09496 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.53■□□□□ 0.88
CLTAP09496 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLTAP09496 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLTAP09496 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLTAP09496 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.53■□□□□ 0.88
CLTAP09496 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.53■□□□□ 0.88
CLTAP09496 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLTAP09496 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.53■□□□□ 0.88
CLTAP09496 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.53■□□□□ 0.88
CLTAP09496 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CLTAP09496 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CLTAP09496 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CLTAP09496 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLTAP09496 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLTAP09496 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.53■□□□□ 0.88
CLTAP09496 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CLTAP09496 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.53■□□□□ 0.88
CLTAP09496 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.53■□□□□ 0.88
CLTAP09496 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLTAP09496 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLTAP09496 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.53■□□□□ 0.88
CLTAP09496 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLTAP09496 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLTAP09496 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CLTAP09496 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLTAP09496 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLTAP09496 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLTAP09496 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLTAP09496 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CLTAP09496 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLTAP09496 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.52■□□□□ 0.88
CLTAP09496 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CLTAP09496 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.52■□□□□ 0.88
CLTAP09496 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.52■□□□□ 0.88
CLTAP09496 MIR4674-201ENST00000582457 87 ntBASIC20.52■□□□□ 0.88
CLTAP09496 AL138966.2-201ENST00000621997 464 ntBASIC20.52■□□□□ 0.88
CLTAP09496 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.52■□□□□ 0.88
CLTAP09496 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLTAP09496 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.52■□□□□ 0.87
CLTAP09496 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CLTAP09496 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.52■□□□□ 0.87
CLTAP09496 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
CLTAP09496 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.51■□□□□ 0.87
CLTAP09496 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLTAP09496 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.51■□□□□ 0.87
CLTAP09496 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CLTAP09496 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLTAP09496 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.51■□□□□ 0.87
CLTAP09496 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLTAP09496 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CLTAP09496 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLTAP09496 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.51■□□□□ 0.87
CLTAP09496 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CLTAP09496 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.51■□□□□ 0.87
CLTAP09496 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLTAP09496 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.51■□□□□ 0.87
CLTAP09496 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLTAP09496 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLTAP09496 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLTAP09496 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLTAP09496 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.51■□□□□ 0.87
CLTAP09496 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLTAP09496 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLTAP09496 KRT8P45-201ENST00000414328 1447 ntBASIC20.51■□□□□ 0.87
CLTAP09496 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CLTAP09496 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLTAP09496 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLTAP09496 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLTAP09496 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
CLTAP09496 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLTAP09496 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLTAP09496 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.5■□□□□ 0.87
CLTAP09496 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLTAP09496 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLTAP09496 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLTAP09496 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLTAP09496 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CLTAP09496 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLTAP09496 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLTAP09496 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLTAP09496 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLTAP09496 AL023284.2-201ENST00000405850 579 ntBASIC20.5■□□□□ 0.87
CLTAP09496 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
CLTAP09496 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.5■□□□□ 0.87
CLTAP09496 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.5■□□□□ 0.87
CLTAP09496 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.5■□□□□ 0.87
CLTAP09496 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
CLTAP09496 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLTAP09496 GPAT2P1-201ENST00000444924 1672 ntBASIC20.5■□□□□ 0.87
CLTAP09496 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLTAP09496 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLTAP09496 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.5■□□□□ 0.87
CLTAP09496 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLTAP09496 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.5■□□□□ 0.87
CLTAP09496 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.5■□□□□ 0.87
CLTAP09496 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.5■□□□□ 0.87
CLTAP09496 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLTAP09496 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms