Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P04436 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
P04436 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
P04436 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
P04436 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.17■□□□□ 0.34
P04436 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.17■□□□□ 0.34
P04436 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
P04436 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
P04436 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
P04436 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.17■□□□□ 0.34
P04436 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
P04436 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.17■□□□□ 0.34
P04436 FAM8A6P-201ENST00000407496 1135 ntBASIC17.17■□□□□ 0.34
P04436 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
P04436 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
P04436 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.17■□□□□ 0.34
P04436 AL441883.1-201ENST00000566170 1045 ntBASIC17.17■□□□□ 0.34
P04436 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
P04436 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.17■□□□□ 0.34
P04436 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
P04436 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
P04436 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P04436 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
P04436 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
P04436 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
P04436 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P04436 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
P04436 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P04436 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P04436 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.16■□□□□ 0.34
P04436 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P04436 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
P04436 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
P04436 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P04436 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
P04436 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
P04436 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P04436 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
P04436 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P04436 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P04436 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P04436 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.16■□□□□ 0.34
P04436 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
P04436 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.16■□□□□ 0.34
P04436 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
P04436 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.16■□□□□ 0.34
P04436 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
P04436 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.16■□□□□ 0.34
P04436 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.16■□□□□ 0.34
P04436 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
P04436 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.16■□□□□ 0.34
P04436 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.16■□□□□ 0.34
P04436 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
P04436 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
P04436 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
P04436 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
P04436 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
P04436 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.16■□□□□ 0.34
P04436 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.16■□□□□ 0.34
P04436 AL109659.2-201ENST00000606809 1674 ntBASIC17.16■□□□□ 0.34
P04436 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P04436 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.16■□□□□ 0.34
P04436 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
P04436 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.15■□□□□ 0.34
P04436 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
P04436 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.15■□□□□ 0.34
P04436 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
P04436 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.15■□□□□ 0.34
P04436 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.15■□□□□ 0.34
P04436 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.15■□□□□ 0.34
P04436 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.15■□□□□ 0.34
P04436 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.15■□□□□ 0.34
P04436 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.15■□□□□ 0.34
P04436 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
P04436 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
P04436 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
P04436 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
P04436 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.15■□□□□ 0.34
P04436 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
P04436 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P04436 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
P04436 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
P04436 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.15■□□□□ 0.34
P04436 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
P04436 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P04436 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.15■□□□□ 0.34
P04436 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P04436 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
P04436 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P04436 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
P04436 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
P04436 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.14■□□□□ 0.33
P04436 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P04436 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P04436 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P04436 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P04436 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.14■□□□□ 0.33
P04436 AL359075.1-203ENST00000462729 1002 ntBASIC17.14■□□□□ 0.33
P04436 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.14■□□□□ 0.33
P04436 GCSHP2-201ENST00000560971 527 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms