Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
COL2A1P02458 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
COL2A1P02458 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL2A1P02458 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL2A1P02458 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL2A1P02458 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL2A1P02458 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC21.95■■□□□ 1.1
COL2A1P02458 IGHGP-201ENST00000390555 1178 ntBASIC21.95■■□□□ 1.1
COL2A1P02458 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC21.95■■□□□ 1.1
COL2A1P02458 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC21.95■■□□□ 1.1
COL2A1P02458 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
COL2A1P02458 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC21.95■■□□□ 1.1
COL2A1P02458 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
COL2A1P02458 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
COL2A1P02458 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC21.95■■□□□ 1.1
COL2A1P02458 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL2A1P02458 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL2A1P02458 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC21.94■■□□□ 1.1
COL2A1P02458 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
COL2A1P02458 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.94■■□□□ 1.1
COL2A1P02458 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.94■■□□□ 1.1
COL2A1P02458 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL2A1P02458 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL2A1P02458 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21.94■■□□□ 1.1
COL2A1P02458 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC21.94■■□□□ 1.1
COL2A1P02458 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL2A1P02458 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL2A1P02458 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
COL2A1P02458 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL2A1P02458 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL2A1P02458 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL2A1P02458 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL2A1P02458 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL2A1P02458 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL2A1P02458 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
COL2A1P02458 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC21.93■■□□□ 1.1
COL2A1P02458 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL2A1P02458 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.93■■□□□ 1.1
COL2A1P02458 AC090616.6-201ENST00000582640 721 ntBASIC21.93■■□□□ 1.1
COL2A1P02458 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21.93■■□□□ 1.1
COL2A1P02458 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC21.93■■□□□ 1.1
COL2A1P02458 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL2A1P02458 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL2A1P02458 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL2A1P02458 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL2A1P02458 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
COL2A1P02458 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL2A1P02458 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL2A1P02458 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL2A1P02458 NFYC-AS1-201ENST00000606277 1687 ntBASIC21.92■■□□□ 1.1
COL2A1P02458 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
COL2A1P02458 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COL2A1P02458 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL2A1P02458 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.92■■□□□ 1.1
COL2A1P02458 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL2A1P02458 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COL2A1P02458 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL2A1P02458 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
COL2A1P02458 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.92■■□□□ 1.1
COL2A1P02458 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC21.92■■□□□ 1.1
COL2A1P02458 TOB2P1-201ENST00000469761 992 ntBASIC21.92■■□□□ 1.1
COL2A1P02458 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.92■■□□□ 1.1
COL2A1P02458 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC21.92■■□□□ 1.1
COL2A1P02458 RN7SL510P-201ENST00000581311 263 ntBASIC21.92■■□□□ 1.1
COL2A1P02458 AC005332.3-201ENST00000589904 676 ntBASIC21.92■■□□□ 1.1
COL2A1P02458 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COL2A1P02458 AC024563.2-201ENST00000603282 481 ntBASIC21.92■■□□□ 1.1
COL2A1P02458 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
COL2A1P02458 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL2A1P02458 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COL2A1P02458 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL2A1P02458 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL2A1P02458 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.92■■□□□ 1.1
COL2A1P02458 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COL2A1P02458 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL2A1P02458 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC21.91■■□□□ 1.1
COL2A1P02458 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL2A1P02458 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.91■■□□□ 1.1
COL2A1P02458 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL2A1P02458 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COL2A1P02458 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC21.91■■□□□ 1.1
COL2A1P02458 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COL2A1P02458 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC21.91■■□□□ 1.1
COL2A1P02458 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
COL2A1P02458 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL2A1P02458 AL032819.2-201ENST00000624543 2162 ntBASIC21.91■■□□□ 1.1
COL2A1P02458 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL2A1P02458 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
COL2A1P02458 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.91■■□□□ 1.1
COL2A1P02458 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC21.91■■□□□ 1.1
COL2A1P02458 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.91■■□□□ 1.1
COL2A1P02458 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL2A1P02458 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL2A1P02458 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL2A1P02458 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.91■■□□□ 1.1
COL2A1P02458 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COL2A1P02458 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL2A1P02458 TSPY19P-201ENST00000418461 509 ntBASIC21.9■■□□□ 1.1
COL2A1P02458 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL2A1P02458 TSPY18P-201ENST00000441642 509 ntBASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms