Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.69■□□□□ 0.26
CNOT4O95628 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.69■□□□□ 0.26
CNOT4O95628 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT4O95628 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT4O95628 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT4O95628 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CNOT4O95628 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.69■□□□□ 0.26
CNOT4O95628 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.69■□□□□ 0.26
CNOT4O95628 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT4O95628 AC104076.2-201ENST00000448912 469 ntBASIC16.69■□□□□ 0.26
CNOT4O95628 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.69■□□□□ 0.26
CNOT4O95628 AP003041.3-201ENST00000527151 707 ntBASIC16.69■□□□□ 0.26
CNOT4O95628 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.69■□□□□ 0.26
CNOT4O95628 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.69■□□□□ 0.26
CNOT4O95628 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT4O95628 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT4O95628 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT4O95628 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT4O95628 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.69■□□□□ 0.26
CNOT4O95628 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT4O95628 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT4O95628 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CNOT4O95628 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT4O95628 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT4O95628 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CNOT4O95628 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CNOT4O95628 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT4O95628 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT4O95628 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT4O95628 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.68■□□□□ 0.26
CNOT4O95628 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT4O95628 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT4O95628 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT4O95628 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CNOT4O95628 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.68■□□□□ 0.26
CNOT4O95628 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT4O95628 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT4O95628 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT4O95628 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.68■□□□□ 0.26
CNOT4O95628 ATP5G1P1-201ENST00000448724 379 ntBASIC16.68■□□□□ 0.26
CNOT4O95628 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CNOT4O95628 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT4O95628 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT4O95628 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.68■□□□□ 0.26
CNOT4O95628 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT4O95628 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
CNOT4O95628 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT4O95628 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CNOT4O95628 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT4O95628 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.68■□□□□ 0.26
CNOT4O95628 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CNOT4O95628 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.68■□□□□ 0.26
CNOT4O95628 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
CNOT4O95628 FP475955.4-201ENST00000623131 1990 ntBASIC16.68■□□□□ 0.26
CNOT4O95628 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.67■□□□□ 0.26
CNOT4O95628 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT4O95628 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CNOT4O95628 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT4O95628 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT4O95628 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT4O95628 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT4O95628 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CNOT4O95628 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT4O95628 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CNOT4O95628 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT4O95628 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT4O95628 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT4O95628 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.67■□□□□ 0.26
CNOT4O95628 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.67■□□□□ 0.26
CNOT4O95628 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.67■□□□□ 0.26
CNOT4O95628 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.67■□□□□ 0.26
CNOT4O95628 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.67■□□□□ 0.26
CNOT4O95628 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.67■□□□□ 0.26
CNOT4O95628 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
CNOT4O95628 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.67■□□□□ 0.26
CNOT4O95628 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CNOT4O95628 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
CNOT4O95628 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT4O95628 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CNOT4O95628 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT4O95628 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT4O95628 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT4O95628 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.67■□□□□ 0.26
CNOT4O95628 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT4O95628 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CNOT4O95628 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT4O95628 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT4O95628 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT4O95628 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNOT4O95628 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.66■□□□□ 0.26
CNOT4O95628 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.66■□□□□ 0.26
CNOT4O95628 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
CNOT4O95628 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNOT4O95628 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CNOT4O95628 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.66■□□□□ 0.26
CNOT4O95628 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.66■□□□□ 0.26
CNOT4O95628 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNOT4O95628 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNOT4O95628 AC087289.5-201ENST00000586076 3175 ntBASIC16.66■□□□□ 0.26
CNOT4O95628 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms