Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AC011840.4-201ENST00000578471 627 ntBASIC18.1■□□□□ 0.49
CDX4O14627 MIR3180-4-201ENST00000582223 153 ntBASIC18.1■□□□□ 0.49
CDX4O14627 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.1■□□□□ 0.49
CDX4O14627 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.1■□□□□ 0.49
CDX4O14627 BNIP3P18-201ENST00000593976 575 ntBASIC18.1■□□□□ 0.49
CDX4O14627 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.1■□□□□ 0.49
CDX4O14627 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.1■□□□□ 0.49
CDX4O14627 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CDX4O14627 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CDX4O14627 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDX4O14627 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.09■□□□□ 0.49
CDX4O14627 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDX4O14627 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDX4O14627 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDX4O14627 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDX4O14627 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDX4O14627 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CDX4O14627 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDX4O14627 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDX4O14627 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDX4O14627 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.09■□□□□ 0.49
CDX4O14627 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDX4O14627 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.09■□□□□ 0.49
CDX4O14627 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDX4O14627 AC073648.2-201ENST00000510116 352 ntBASIC18.09■□□□□ 0.49
CDX4O14627 AC139887.3-201ENST00000568585 713 ntBASIC18.09■□□□□ 0.49
CDX4O14627 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.09■□□□□ 0.49
CDX4O14627 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.09■□□□□ 0.49
CDX4O14627 MIR7706-201ENST00000613747 67 ntBASIC18.09■□□□□ 0.49
CDX4O14627 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.09■□□□□ 0.49
CDX4O14627 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDX4O14627 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CDX4O14627 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.09■□□□□ 0.49
CDX4O14627 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CDX4O14627 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDX4O14627 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDX4O14627 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.08■□□□□ 0.49
CDX4O14627 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
CDX4O14627 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDX4O14627 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CDX4O14627 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CDX4O14627 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
CDX4O14627 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.48
CDX4O14627 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDX4O14627 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.08■□□□□ 0.48
CDX4O14627 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
CDX4O14627 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.08■□□□□ 0.48
CDX4O14627 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.08■□□□□ 0.48
CDX4O14627 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.08■□□□□ 0.48
CDX4O14627 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.08■□□□□ 0.48
CDX4O14627 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.08■□□□□ 0.48
CDX4O14627 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
CDX4O14627 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
CDX4O14627 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDX4O14627 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.08■□□□□ 0.48
CDX4O14627 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDX4O14627 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.08■□□□□ 0.48
CDX4O14627 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDX4O14627 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.08■□□□□ 0.48
CDX4O14627 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.07■□□□□ 0.48
CDX4O14627 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDX4O14627 ZNF259P1-201ENST00000407656 1365 ntBASIC18.07■□□□□ 0.48
CDX4O14627 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDX4O14627 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.07■□□□□ 0.48
CDX4O14627 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDX4O14627 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDX4O14627 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDX4O14627 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDX4O14627 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.07■□□□□ 0.48
CDX4O14627 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.07■□□□□ 0.48
CDX4O14627 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDX4O14627 HMGN1P19-201ENST00000436976 333 ntBASIC18.07■□□□□ 0.48
CDX4O14627 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
CDX4O14627 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
CDX4O14627 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDX4O14627 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.07■□□□□ 0.48
CDX4O14627 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.07■□□□□ 0.48
CDX4O14627 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.07■□□□□ 0.48
CDX4O14627 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.07■□□□□ 0.48
CDX4O14627 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDX4O14627 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.07■□□□□ 0.48
CDX4O14627 AC008608.2-201ENST00000606089 416 ntBASIC18.07■□□□□ 0.48
CDX4O14627 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.07■□□□□ 0.48
CDX4O14627 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDX4O14627 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.07■□□□□ 0.48
CDX4O14627 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDX4O14627 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDX4O14627 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDX4O14627 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDX4O14627 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDX4O14627 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDX4O14627 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDX4O14627 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDX4O14627 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.06■□□□□ 0.48
CDX4O14627 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDX4O14627 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDX4O14627 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.06■□□□□ 0.48
CDX4O14627 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.06■□□□□ 0.48
CDX4O14627 AC132008.2-207ENST00000454517 770 ntBASIC18.06■□□□□ 0.48
CDX4O14627 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms