Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
AP3D1O14617 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
AP3D1O14617 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
AP3D1O14617 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
AP3D1O14617 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.58■□□□□ 0.4
AP3D1O14617 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.58■□□□□ 0.4
AP3D1O14617 KRT16P5-201ENST00000455284 522 ntBASIC17.58■□□□□ 0.4
AP3D1O14617 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
AP3D1O14617 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.58■□□□□ 0.4
AP3D1O14617 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.58■□□□□ 0.4
AP3D1O14617 AC110285.5-201ENST00000611501 352 ntBASIC17.58■□□□□ 0.4
AP3D1O14617 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.58■□□□□ 0.4
AP3D1O14617 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.58■□□□□ 0.4
AP3D1O14617 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP3D1O14617 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
AP3D1O14617 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
AP3D1O14617 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.58■□□□□ 0.4
AP3D1O14617 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
AP3D1O14617 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
AP3D1O14617 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP3D1O14617 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
AP3D1O14617 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.58■□□□□ 0.4
AP3D1O14617 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
AP3D1O14617 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP3D1O14617 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP3D1O14617 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
AP3D1O14617 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3D1O14617 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.57■□□□□ 0.4
AP3D1O14617 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3D1O14617 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
AP3D1O14617 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3D1O14617 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3D1O14617 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
AP3D1O14617 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.57■□□□□ 0.4
AP3D1O14617 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
AP3D1O14617 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3D1O14617 FAM201B-201ENST00000458407 597 ntBASIC17.57■□□□□ 0.4
AP3D1O14617 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
AP3D1O14617 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.57■□□□□ 0.4
AP3D1O14617 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.57■□□□□ 0.4
AP3D1O14617 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
AP3D1O14617 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.57■□□□□ 0.4
AP3D1O14617 Z98044.1-201ENST00000632503 1764 ntBASIC17.57■□□□□ 0.4
AP3D1O14617 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3D1O14617 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
AP3D1O14617 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3D1O14617 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.57■□□□□ 0.4
AP3D1O14617 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3D1O14617 OR6D1P-202ENST00000641007 5290 ntBASIC17.56■□□□□ 0.4
AP3D1O14617 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3D1O14617 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3D1O14617 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3D1O14617 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3D1O14617 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3D1O14617 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.56■□□□□ 0.4
AP3D1O14617 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
AP3D1O14617 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3D1O14617 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3D1O14617 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3D1O14617 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3D1O14617 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.56■□□□□ 0.4
AP3D1O14617 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3D1O14617 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
AP3D1O14617 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.56■□□□□ 0.4
AP3D1O14617 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.56■□□□□ 0.4
AP3D1O14617 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.56■□□□□ 0.4
AP3D1O14617 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
AP3D1O14617 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.56■□□□□ 0.4
AP3D1O14617 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.56■□□□□ 0.4
AP3D1O14617 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
AP3D1O14617 AC093525.10-201ENST00000625130 1569 ntBASIC17.56■□□□□ 0.4
AP3D1O14617 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.56■□□□□ 0.4
AP3D1O14617 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3D1O14617 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
AP3D1O14617 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.56■□□□□ 0.4
AP3D1O14617 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3D1O14617 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP3D1O14617 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP3D1O14617 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.55■□□□□ 0.4
AP3D1O14617 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP3D1O14617 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AP3D1O14617 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
AP3D1O14617 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP3D1O14617 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
AP3D1O14617 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
AP3D1O14617 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AP3D1O14617 AC106820.2-201ENST00000563775 3264 ntBASIC17.55■□□□□ 0.4
AP3D1O14617 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.55■□□□□ 0.4
AP3D1O14617 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP3D1O14617 TSPY21P-201ENST00000433481 731 ntBASIC17.55■□□□□ 0.4
AP3D1O14617 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.55■□□□□ 0.4
AP3D1O14617 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AP3D1O14617 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
AP3D1O14617 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AP3D1O14617 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
AP3D1O14617 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AP3D1O14617 RPPH1-201ENST00000516869 333 ntBASIC17.55■□□□□ 0.4
AP3D1O14617 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.55■□□□□ 0.4
AP3D1O14617 AL160286.2-201ENST00000567150 934 ntBASIC17.55■□□□□ 0.4
AP3D1O14617 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms