Protein–RNA interactions for Protein: A7E2V4

ZSWIM8, Zinc finger SWIM domain-containing protein 8, humanhuman

Predictions only

Length 1,837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM8A7E2V4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ZSWIM8A7E2V4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
ZSWIM8A7E2V4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZSWIM8A7E2V4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.3■■□□□ 1
ZSWIM8A7E2V4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
ZSWIM8A7E2V4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.3■■□□□ 1
ZSWIM8A7E2V4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZSWIM8A7E2V4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.3■■□□□ 1
ZSWIM8A7E2V4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZSWIM8A7E2V4 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
ZSWIM8A7E2V4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.3■■□□□ 1
ZSWIM8A7E2V4 TERC-201ENST00000602385 541 ntBASIC21.3■■□□□ 1
ZSWIM8A7E2V4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC21.3■■□□□ 1
ZSWIM8A7E2V4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.3■■□□□ 1
ZSWIM8A7E2V4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZSWIM8A7E2V4 KRT8P3-201ENST00000519669 1449 ntBASIC21.3■■□□□ 1
ZSWIM8A7E2V4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
ZSWIM8A7E2V4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.3■■□□□ 1
ZSWIM8A7E2V4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
ZSWIM8A7E2V4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
ZSWIM8A7E2V4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
ZSWIM8A7E2V4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.29■■□□□ 1
ZSWIM8A7E2V4 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZSWIM8A7E2V4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC21.29■■□□□ 1
ZSWIM8A7E2V4 IGHGP-201ENST00000390555 1178 ntBASIC21.29■■□□□ 1
ZSWIM8A7E2V4 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC21.29■■□□□ 1
ZSWIM8A7E2V4 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC21.29■■□□□ 1
ZSWIM8A7E2V4 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21.29■■□□□ 1
ZSWIM8A7E2V4 AC055717.3-201ENST00000622967 595 ntBASIC21.29■■□□□ 1
ZSWIM8A7E2V4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.29■■□□□ 1
ZSWIM8A7E2V4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.29■■□□□ 1
ZSWIM8A7E2V4 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZSWIM8A7E2V4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.29■■□□□ 1
ZSWIM8A7E2V4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.29■■□□□ 1
ZSWIM8A7E2V4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
ZSWIM8A7E2V4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.29■■□□□ 1
ZSWIM8A7E2V4 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
ZSWIM8A7E2V4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZSWIM8A7E2V4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZSWIM8A7E2V4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC21.29■■□□□ 1
ZSWIM8A7E2V4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.29■■□□□ 1
ZSWIM8A7E2V4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
ZSWIM8A7E2V4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
ZSWIM8A7E2V4 RCC2P3-201ENST00000418112 1537 ntBASIC21.28■■□□□ 1
ZSWIM8A7E2V4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.28■■□□□ 1
ZSWIM8A7E2V4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZSWIM8A7E2V4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
ZSWIM8A7E2V4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
ZSWIM8A7E2V4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.28■■□□□ 1
ZSWIM8A7E2V4 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
ZSWIM8A7E2V4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC21.28■■□□□ 1
ZSWIM8A7E2V4 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
ZSWIM8A7E2V4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
ZSWIM8A7E2V4 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC21.28■■□□□ 1
ZSWIM8A7E2V4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC21.28■■□□□ 1
ZSWIM8A7E2V4 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC21.28■■□□□ 1
ZSWIM8A7E2V4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC21.28■■□□□ 1
ZSWIM8A7E2V4 AC005336.2-201ENST00000593183 939 ntBASIC21.28■■□□□ 1
ZSWIM8A7E2V4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC21.28■■□□□ 1
ZSWIM8A7E2V4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
ZSWIM8A7E2V4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
ZSWIM8A7E2V4 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.28■■□□□ 1
ZSWIM8A7E2V4 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
ZSWIM8A7E2V4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ZSWIM8A7E2V4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ZSWIM8A7E2V4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC21.27■■□□□ 1
ZSWIM8A7E2V4 AC009065.1-201ENST00000564055 1225 ntBASIC21.27■■□□□ 1
ZSWIM8A7E2V4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC21.27■■□□□ 1
ZSWIM8A7E2V4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC21.27■■□□□ 1
ZSWIM8A7E2V4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.27■■□□□ 1
ZSWIM8A7E2V4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.27■■□□□ 1
ZSWIM8A7E2V4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.27■■□□□ 1
ZSWIM8A7E2V4 AC008556.1-201ENST00000610908 2040 ntBASIC21.27■■□□□ 1
ZSWIM8A7E2V4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.27■■□□□ 1
ZSWIM8A7E2V4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
ZSWIM8A7E2V4 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
ZSWIM8A7E2V4 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ZSWIM8A7E2V4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.27■■□□□ 1
ZSWIM8A7E2V4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ZSWIM8A7E2V4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
ZSWIM8A7E2V4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.27■■□□□ 1
ZSWIM8A7E2V4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ZSWIM8A7E2V4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ZSWIM8A7E2V4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.27■■□□□ 1
ZSWIM8A7E2V4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.27■■□□□ 1
ZSWIM8A7E2V4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC21.27■□□□□ 0.99
ZSWIM8A7E2V4 FAM220CP-201ENST00000395253 831 ntBASIC21.27■□□□□ 0.99
ZSWIM8A7E2V4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.27■□□□□ 0.99
ZSWIM8A7E2V4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC21.27■□□□□ 0.99
ZSWIM8A7E2V4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC21.27■□□□□ 0.99
ZSWIM8A7E2V4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
ZSWIM8A7E2V4 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC21.27■□□□□ 0.99
ZSWIM8A7E2V4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC21.27■□□□□ 0.99
ZSWIM8A7E2V4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
ZSWIM8A7E2V4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.26■□□□□ 0.99
ZSWIM8A7E2V4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZSWIM8A7E2V4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZSWIM8A7E2V4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ZSWIM8A7E2V4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZSWIM8A7E2V4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms