Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CNOT1A5YKK6 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CNOT1A5YKK6 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNOT1A5YKK6 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
CNOT1A5YKK6 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CNOT1A5YKK6 TREX1-205ENST00000625293 1783 ntBASIC17.94■□□□□ 0.46
CNOT1A5YKK6 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.94■□□□□ 0.46
CNOT1A5YKK6 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.94■□□□□ 0.46
CNOT1A5YKK6 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNOT1A5YKK6 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNOT1A5YKK6 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.93■□□□□ 0.46
CNOT1A5YKK6 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNOT1A5YKK6 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNOT1A5YKK6 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNOT1A5YKK6 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNOT1A5YKK6 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNOT1A5YKK6 FAM8A3P-201ENST00000427218 844 ntBASIC17.93■□□□□ 0.46
CNOT1A5YKK6 AC096582.2-201ENST00000510860 516 ntBASIC17.93■□□□□ 0.46
CNOT1A5YKK6 SART3-203ENST00000546611 1184 ntBASIC17.93■□□□□ 0.46
CNOT1A5YKK6 AC024563.2-201ENST00000603282 481 ntBASIC17.93■□□□□ 0.46
CNOT1A5YKK6 FAM197Y3-203ENST00000618346 717 ntBASIC17.93■□□□□ 0.46
CNOT1A5YKK6 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.92■□□□□ 0.46
CNOT1A5YKK6 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CNOT1A5YKK6 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNOT1A5YKK6 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNOT1A5YKK6 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.92■□□□□ 0.46
CNOT1A5YKK6 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CNOT1A5YKK6 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.92■□□□□ 0.46
CNOT1A5YKK6 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
CNOT1A5YKK6 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNOT1A5YKK6 GUSBP12-201ENST00000513727 720 ntBASIC17.92■□□□□ 0.46
CNOT1A5YKK6 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.92■□□□□ 0.46
CNOT1A5YKK6 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.92■□□□□ 0.46
CNOT1A5YKK6 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CNOT1A5YKK6 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CNOT1A5YKK6 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNOT1A5YKK6 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNOT1A5YKK6 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNOT1A5YKK6 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.92■□□□□ 0.46
CNOT1A5YKK6 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.92■□□□□ 0.46
CNOT1A5YKK6 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CNOT1A5YKK6 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNOT1A5YKK6 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
CNOT1A5YKK6 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNOT1A5YKK6 AC023274.1-201ENST00000418278 595 ntBASIC17.91■□□□□ 0.46
CNOT1A5YKK6 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CNOT1A5YKK6 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.91■□□□□ 0.46
CNOT1A5YKK6 MIR3687-2-201ENST00000577708 61 ntBASIC17.91■□□□□ 0.46
CNOT1A5YKK6 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.91■□□□□ 0.46
CNOT1A5YKK6 AC005336.2-201ENST00000593183 939 ntBASIC17.91■□□□□ 0.46
CNOT1A5YKK6 MIR3687-1-201ENST00000614492 61 ntBASIC17.91■□□□□ 0.46
CNOT1A5YKK6 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.91■□□□□ 0.46
CNOT1A5YKK6 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNOT1A5YKK6 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNOT1A5YKK6 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CNOT1A5YKK6 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNOT1A5YKK6 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNOT1A5YKK6 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CNOT1A5YKK6 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CNOT1A5YKK6 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNOT1A5YKK6 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNOT1A5YKK6 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CNOT1A5YKK6 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.91■□□□□ 0.46
CNOT1A5YKK6 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CNOT1A5YKK6 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CNOT1A5YKK6 ZNF815P-204ENST00000434898 1737 ntBASIC17.91■□□□□ 0.46
CNOT1A5YKK6 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CNOT1A5YKK6 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CNOT1A5YKK6 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNOT1A5YKK6 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CNOT1A5YKK6 HLA-J-201ENST00000462773 1622 ntBASIC17.91■□□□□ 0.46
CNOT1A5YKK6 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.9■□□□□ 0.46
CNOT1A5YKK6 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CNOT1A5YKK6 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNOT1A5YKK6 AC132008.2-207ENST00000454517 770 ntBASIC17.9■□□□□ 0.46
CNOT1A5YKK6 AP003733.1-201ENST00000491725 852 ntBASIC17.9■□□□□ 0.46
CNOT1A5YKK6 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CNOT1A5YKK6 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.9■□□□□ 0.46
CNOT1A5YKK6 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNOT1A5YKK6 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.9■□□□□ 0.46
CNOT1A5YKK6 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNOT1A5YKK6 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.9■□□□□ 0.46
CNOT1A5YKK6 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNOT1A5YKK6 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
CNOT1A5YKK6 AC133561.1-201ENST00000568600 2415 ntBASIC17.9■□□□□ 0.46
CNOT1A5YKK6 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.9■□□□□ 0.46
CNOT1A5YKK6 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.9■□□□□ 0.46
CNOT1A5YKK6 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.9■□□□□ 0.46
CNOT1A5YKK6 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CNOT1A5YKK6 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.46
CNOT1A5YKK6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.89■□□□□ 0.46
CNOT1A5YKK6 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.89■□□□□ 0.45
CNOT1A5YKK6 RBM17P3-201ENST00000417687 1192 ntBASIC17.89■□□□□ 0.45
CNOT1A5YKK6 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.89■□□□□ 0.45
CNOT1A5YKK6 RN7SL606P-201ENST00000472779 293 ntBASIC17.89■□□□□ 0.45
CNOT1A5YKK6 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNOT1A5YKK6 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.89■□□□□ 0.45
CNOT1A5YKK6 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.89■□□□□ 0.45
CNOT1A5YKK6 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.89■□□□□ 0.45
CNOT1A5YKK6 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms