Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 MIR3611-201ENST00000584484 83 ntBASIC-3.5□□□□□ -2.97
COL12A1Q99715 AL353621.2-201ENST00000605340 133 ntBASIC-3.5□□□□□ -2.97
COL12A1Q99715 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-3.5□□□□□ -2.97
COL12A1Q99715 MIR3914-2-201ENST00000637339 95 ntBASIC-3.5□□□□□ -2.97
COL12A1Q99715 Y_RNA.277-201ENST00000364754 102 ntBASIC-3.5□□□□□ -2.97
COL12A1Q99715 Y_RNA.626-201ENST00000411288 95 ntBASIC-3.5□□□□□ -2.97
COL12A1Q99715 RNU7-30P-201ENST00000516835 62 ntBASIC-3.5□□□□□ -2.97
COL12A1Q99715 AC113139.1-201ENST00000605049 239 ntBASIC-3.5□□□□□ -2.97
COL12A1Q99715 Y_RNA.58-201ENST00000362807 102 ntBASIC-3.51□□□□□ -2.97
COL12A1Q99715 MTND5P20-201ENST00000448677 143 ntBASIC-3.51□□□□□ -2.97
COL12A1Q99715 Y_RNA.645-201ENST00000391229 102 ntBASIC-3.52□□□□□ -2.97
COL12A1Q99715 Y_RNA.593-201ENST00000410292 98 ntBASIC-3.52□□□□□ -2.97
COL12A1Q99715 AC004792.1-201ENST00000614523 137 ntBASIC-3.52□□□□□ -2.97
COL12A1Q99715 RNU6-780P-201ENST00000391030 104 ntBASIC-3.52□□□□□ -2.97
COL12A1Q99715 MIR3915-201ENST00000578518 97 ntBASIC-3.53□□□□□ -2.97
COL12A1Q99715 Y_RNA.89-201ENST00000363031 102 ntBASIC-3.54□□□□□ -2.98
COL12A1Q99715 RNU6-1131P-201ENST00000364955 107 ntBASIC-3.54□□□□□ -2.98
COL12A1Q99715 Y_RNA.712-201ENST00000517011 92 ntBASIC-3.54□□□□□ -2.98
COL12A1Q99715 RNU6-1135P-201ENST00000411083 103 ntBASIC-3.54□□□□□ -2.98
COL12A1Q99715 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-3.54□□□□□ -2.98
COL12A1Q99715 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-3.55□□□□□ -2.98
COL12A1Q99715 SNORD116-4-201ENST00000384733 96 ntBASIC-3.55□□□□□ -2.98
COL12A1Q99715 RNU6-232P-201ENST00000517144 64 ntBASIC-3.55□□□□□ -2.98
COL12A1Q99715 MTND4P17-201ENST00000470444 350 ntBASIC-3.56□□□□□ -2.98
COL12A1Q99715 MIR633-201ENST00000384821 98 ntBASIC-3.57□□□□□ -2.98
COL12A1Q99715 Y_RNA.259-201ENST00000364619 101 ntBASIC-3.58□□□□□ -2.98
COL12A1Q99715 SNORD116-29-201ENST00000384516 83 ntBASIC-3.58□□□□□ -2.98
COL12A1Q99715 RNU7-152P-201ENST00000458982 64 ntBASIC-3.58□□□□□ -2.98
COL12A1Q99715 Y_RNA.580-201ENST00000391004 95 ntBASIC-3.59□□□□□ -2.98
COL12A1Q99715 MIR548X2-201ENST00000579776 100 ntBASIC-3.59□□□□□ -2.98
COL12A1Q99715 MIR4509-3-201ENST00000578671 94 ntBASIC-3.59□□□□□ -2.98
COL12A1Q99715 MIR4509-2-201ENST00000583920 94 ntBASIC-3.59□□□□□ -2.98
COL12A1Q99715 MIR4509-1-201ENST00000618224 94 ntBASIC-3.59□□□□□ -2.98
COL12A1Q99715 SNORD116-18-201ENST00000383961 92 ntBASIC-3.59□□□□□ -2.98
COL12A1Q99715 RNU5A-2P-201ENST00000384337 116 ntBASIC-3.6□□□□□ -2.99
COL12A1Q99715 RNU6-426P-201ENST00000516464 97 ntBASIC-3.6□□□□□ -2.99
COL12A1Q99715 Y_RNA.210-201ENST00000364161 110 ntBASIC-3.61□□□□□ -2.99
COL12A1Q99715 MTND4LP9-201ENST00000427694 174 ntBASIC-3.61□□□□□ -2.99
COL12A1Q99715 SNORA40-201ENST00000388090 126 ntBASIC-3.61□□□□□ -2.99
COL12A1Q99715 RNU7-125P-201ENST00000458760 62 ntBASIC-3.61□□□□□ -2.99
COL12A1Q99715 SNORA33.2-201ENST00000365413 134 ntBASIC-3.62□□□□□ -2.99
COL12A1Q99715 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-3.62□□□□□ -2.99
COL12A1Q99715 Y_RNA.662-201ENST00000516028 97 ntBASIC-3.63□□□□□ -2.99
COL12A1Q99715 Y_RNA.356-201ENST00000365475 113 ntBASIC-3.65□□□□□ -2.99
COL12A1Q99715 RNU6-1020P-201ENST00000363684 107 ntBASIC-3.66□□□□□ -2.99
COL12A1Q99715 AC141273.2-201ENST00000618989 130 ntBASIC-3.66□□□□□ -2.99
COL12A1Q99715 Y_RNA.197-201ENST00000364004 102 ntBASIC-3.67□□□□□ -3
COL12A1Q99715 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-3.67□□□□□ -3
COL12A1Q99715 Y_RNA.573-201ENST00000384763 105 ntBASIC-3.67□□□□□ -3
COL12A1Q99715 AC022559.1-201ENST00000520905 205 ntBASIC-3.67□□□□□ -3
COL12A1Q99715 RNU6-713P-201ENST00000384761 107 ntBASIC-3.69□□□□□ -3
COL12A1Q99715 AC008267.6-201ENST00000441664 139 ntBASIC-3.69□□□□□ -3
COL12A1Q99715 AC113195.1-201ENST00000579952 141 ntBASIC-3.7□□□□□ -3
COL12A1Q99715 Y_RNA.70-201ENST00000362886 110 ntBASIC-3.7□□□□□ -3
COL12A1Q99715 MIR488-201ENST00000365739 83 ntBASIC-3.7□□□□□ -3
COL12A1Q99715 RNU6-820P-201ENST00000384273 107 ntBASIC-3.71□□□□□ -3
COL12A1Q99715 MIR548F1-201ENST00000408667 84 ntBASIC-3.71□□□□□ -3
COL12A1Q99715 Y_RNA.200-201ENST00000364018 102 ntBASIC-3.72□□□□□ -3
COL12A1Q99715 Y_RNA.343-201ENST00000365354 112 ntBASIC-3.72□□□□□ -3.01
COL12A1Q99715 RNY4P14-201ENST00000363656 96 ntBASIC-3.74□□□□□ -3.01
COL12A1Q99715 RNU6-49P-201ENST00000384256 107 ntBASIC-3.74□□□□□ -3.01
COL12A1Q99715 RNU6-394P-201ENST00000410735 107 ntBASIC-3.74□□□□□ -3.01
COL12A1Q99715 MIR4680-201ENST00000580906 66 ntBASIC-3.74□□□□□ -3.01
COL12A1Q99715 RNU6-640P-201ENST00000363693 105 ntBASIC-3.74□□□□□ -3.01
COL12A1Q99715 MIR569-201ENST00000385228 96 ntBASIC-3.75□□□□□ -3.01
COL12A1Q99715 DEFB108C-201ENST00000400154 252 ntBASIC-3.75□□□□□ -3.01
COL12A1Q99715 MIR4662A-201ENST00000637499 67 ntBASIC-3.76□□□□□ -3.01
COL12A1Q99715 MIR450A1-201ENST00000362262 91 ntBASIC-3.77□□□□□ -3.01
COL12A1Q99715 MIR1255A-201ENST00000408338 113 ntBASIC-3.77□□□□□ -3.01
COL12A1Q99715 AC125388.1-201ENST00000459631 156 ntBASIC-3.78□□□□□ -3.01
COL12A1Q99715 RNU6-277P-201ENST00000516272 106 ntBASIC-3.78□□□□□ -3.01
COL12A1Q99715 RNU6-857P-201ENST00000515893 110 ntBASIC-3.79□□□□□ -3.02
COL12A1Q99715 RNU6-956P-201ENST00000458868 103 ntBASIC-3.79□□□□□ -3.02
COL12A1Q99715 RNU6-589P-201ENST00000516485 107 ntBASIC-3.81□□□□□ -3.02
COL12A1Q99715 RNU6-1056P-201ENST00000383996 107 ntBASIC-3.81□□□□□ -3.02
COL12A1Q99715 MIR3202-2-201ENST00000635980 79 ntBASIC-3.82□□□□□ -3.02
COL12A1Q99715 MTND4LP19-201ENST00000403051 166 ntBASIC-3.82□□□□□ -3.02
COL12A1Q99715 MIR1302-3-201ENST00000408128 138 ntBASIC-3.82□□□□□ -3.02
COL12A1Q99715 RNU6-279P-201ENST00000391297 101 ntBASIC-3.85□□□□□ -3.03
COL12A1Q99715 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-3.85□□□□□ -3.03
COL12A1Q99715 RNU6-32P-201ENST00000383948 107 ntBASIC-3.85□□□□□ -3.03
COL12A1Q99715 RNU6-13P-201ENST00000384248 107 ntBASIC-3.85□□□□□ -3.03
COL12A1Q99715 RNU6-12P-201ENST00000384604 107 ntBASIC-3.85□□□□□ -3.03
COL12A1Q99715 RNU6-41P-201ENST00000384741 107 ntBASIC-3.85□□□□□ -3.03
COL12A1Q99715 Y_RNA.553-201ENST00000384670 102 ntBASIC-3.86□□□□□ -3.03
COL12A1Q99715 RNU6-751P-201ENST00000516382 101 ntBASIC-3.86□□□□□ -3.03
COL12A1Q99715 RNU6-635P-201ENST00000516651 102 ntBASIC-3.86□□□□□ -3.03
COL12A1Q99715 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-3.87□□□□□ -3.03
COL12A1Q99715 RNY4P30-201ENST00000410216 95 ntBASIC-3.87□□□□□ -3.03
COL12A1Q99715 Y_RNA.431-201ENST00000384086 102 ntBASIC-3.88□□□□□ -3.03
COL12A1Q99715 RNU6-406P-201ENST00000516470 107 ntBASIC-3.88□□□□□ -3.03
COL12A1Q99715 RNU6-804P-201ENST00000384286 107 ntBASIC-3.89□□□□□ -3.03
COL12A1Q99715 RNU6-257P-201ENST00000410238 98 ntBASIC-3.89□□□□□ -3.03
COL12A1Q99715 RNU6-506P-201ENST00000516553 94 ntBASIC-3.89□□□□□ -3.03
COL12A1Q99715 AC006362.1-201ENST00000567392 174 ntBASIC-3.89□□□□□ -3.03
COL12A1Q99715 MTND5P41-201ENST00000517498 206 ntBASIC-3.9□□□□□ -3.03
COL12A1Q99715 MTND4P29-201ENST00000503122 1372 ntBASIC-3.91□□□□□ -3.04
COL12A1Q99715 SNORD19B-201ENST00000459623 84 ntBASIC-3.91□□□□□ -3.04
COL12A1Q99715 Y_RNA.422-201ENST00000384054 114 ntBASIC-3.92□□□□□ -3.04
COL12A1Q99715 SNORD78.1-201ENST00000390866 65 ntBASIC-3.92□□□□□ -3.04
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms