Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 RNU7-107P-201ENST00000459121 61 ntBASIC-3.47□□□□□ -2.96
APOBP04114 Y_RNA.712-201ENST00000517011 92 ntBASIC-3.47□□□□□ -2.97
APOBP04114 AC110620.1-201ENST00000416042 228 ntBASIC-3.48□□□□□ -2.97
APOBP04114 SNORD19B-201ENST00000459623 84 ntBASIC-3.48□□□□□ -2.97
APOBP04114 RNU6-871P-201ENST00000516122 100 ntBASIC-3.48□□□□□ -2.97
APOBP04114 Y_RNA.580-201ENST00000391004 95 ntBASIC-3.48□□□□□ -2.97
APOBP04114 SNORD33.1-201ENST00000516213 88 ntBASIC-3.49□□□□□ -2.97
APOBP04114 SNORA40.13-201ENST00000516379 120 ntBASIC-3.49□□□□□ -2.97
APOBP04114 RNU6-485P-201ENST00000363475 107 ntBASIC-3.49□□□□□ -2.97
APOBP04114 RNU6-394P-201ENST00000410735 107 ntBASIC-3.49□□□□□ -2.97
APOBP04114 MIR4680-201ENST00000580906 66 ntBASIC-3.51□□□□□ -2.97
APOBP04114 snoMBII-202.2-201ENST00000517263 86 ntBASIC-3.51□□□□□ -2.97
APOBP04114 Y_RNA.579-201ENST00000390939 94 ntBASIC-3.52□□□□□ -2.97
APOBP04114 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-3.52□□□□□ -2.97
APOBP04114 SNORA40-201ENST00000388090 126 ntBASIC-3.53□□□□□ -2.97
APOBP04114 RNU6-133P-201ENST00000383989 107 ntBASIC-3.53□□□□□ -2.97
APOBP04114 MIR1302-1-201ENST00000637932 143 ntBASIC-3.53□□□□□ -2.98
APOBP04114 RNU6-426P-201ENST00000516464 97 ntBASIC-3.54□□□□□ -2.98
APOBP04114 RNU6-844P-201ENST00000517175 102 ntBASIC-3.54□□□□□ -2.98
APOBP04114 AC022559.1-201ENST00000520905 205 ntBASIC-3.54□□□□□ -2.98
APOBP04114 RNU7-171P-201ENST00000459581 62 ntBASIC-3.54□□□□□ -2.98
APOBP04114 RNU6-635P-201ENST00000516651 102 ntBASIC-3.54□□□□□ -2.98
APOBP04114 MIR620-201ENST00000385232 95 ntBASIC-3.55□□□□□ -2.98
APOBP04114 AL031737.1-201ENST00000450125 223 ntBASIC-3.55□□□□□ -2.98
APOBP04114 Y_RNA.160-201ENST00000363677 92 ntBASIC-3.56□□□□□ -2.98
APOBP04114 Y_RNA.316-201ENST00000365118 111 ntBASIC-3.56□□□□□ -2.98
APOBP04114 RNU6-446P-201ENST00000362827 106 ntBASIC-3.57□□□□□ -2.98
APOBP04114 SNORD42.2-201ENST00000365570 69 ntBASIC-3.57□□□□□ -2.98
APOBP04114 Y_RNA.545-201ENST00000384652 105 ntBASIC-3.57□□□□□ -2.98
APOBP04114 RNY3P1-201ENST00000365085 102 ntBASIC-3.58□□□□□ -2.98
APOBP04114 MIR4511-201ENST00000582784 87 ntBASIC-3.58□□□□□ -2.98
APOBP04114 U6.103-201ENST00000637085 61 ntBASIC-3.58□□□□□ -2.98
APOBP04114 RNU6-463P-201ENST00000384340 107 ntBASIC-3.59□□□□□ -2.98
APOBP04114 MT-TL1-201ENST00000386347 75 ntBASIC-3.59□□□□□ -2.98
APOBP04114 Y_RNA.343-201ENST00000365354 112 ntBASIC-3.59□□□□□ -2.98
APOBP04114 AC004792.1-201ENST00000614523 137 ntBASIC-3.6□□□□□ -2.99
APOBP04114 RNU6-753P-201ENST00000363926 107 ntBASIC-3.6□□□□□ -2.99
APOBP04114 RNU6-930P-201ENST00000390938 100 ntBASIC-3.6□□□□□ -2.99
APOBP04114 RNU6-804P-201ENST00000384286 107 ntBASIC-3.61□□□□□ -2.99
APOBP04114 RNU6-1023P-201ENST00000516137 106 ntBASIC-3.61□□□□□ -2.99
APOBP04114 Y_RNA.788-201ENST00000622394 112 ntBASIC-3.61□□□□□ -2.99
APOBP04114 SNORA20.1-201ENST00000364790 130 ntBASIC-3.61□□□□□ -2.99
APOBP04114 SNORD113-4-201ENST00000364802 75 ntBASIC-3.61□□□□□ -2.99
APOBP04114 RNU6-539P-201ENST00000516665 103 ntBASIC-3.61□□□□□ -2.99
APOBP04114 MALAT1.1-201ENST00000618249 95 ntBASIC-3.61□□□□□ -2.99
APOBP04114 Y_RNA.94-201ENST00000363068 106 ntBASIC-3.63□□□□□ -2.99
APOBP04114 MIR569-201ENST00000385228 96 ntBASIC-3.64□□□□□ -2.99
APOBP04114 Y_RNA.574-201ENST00000384766 95 ntBASIC-3.64□□□□□ -2.99
APOBP04114 AC069439.1-201ENST00000494739 167 ntBASIC-3.64□□□□□ -2.99
APOBP04114 Y_RNA.297-201ENST00000364950 91 ntBASIC-3.65□□□□□ -2.99
APOBP04114 MIR4712-201ENST00000583750 82 ntBASIC-3.65□□□□□ -2.99
APOBP04114 AC141273.2-201ENST00000618989 130 ntBASIC-3.65□□□□□ -2.99
APOBP04114 MIR548F1-201ENST00000408667 84 ntBASIC-3.66□□□□□ -3
APOBP04114 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-3.66□□□□□ -3
APOBP04114 MIR3128-201ENST00000581957 66 ntBASIC-3.66□□□□□ -3
APOBP04114 IGLL4P-201ENST00000614590 133 ntBASIC-3.66□□□□□ -3
APOBP04114 RNU2-16P-201ENST00000410712 136 ntBASIC-3.67□□□□□ -3
APOBP04114 AL353621.2-201ENST00000605340 133 ntBASIC-3.67□□□□□ -3
APOBP04114 AC134503.1-201ENST00000633048 54 ntBASIC-3.67□□□□□ -3
APOBP04114 Y_RNA.460-201ENST00000384255 102 ntBASIC-3.68□□□□□ -3
APOBP04114 RNU7-120P-201ENST00000459334 63 ntBASIC-3.68□□□□□ -3
APOBP04114 MIR548F3-201ENST00000408509 87 ntBASIC-3.69□□□□□ -3
APOBP04114 RNU6-829P-201ENST00000363700 112 ntBASIC-3.69□□□□□ -3
APOBP04114 Y_RNA.431-201ENST00000384086 102 ntBASIC-3.69□□□□□ -3
APOBP04114 Y_RNA.73-201ENST00000362910 113 ntBASIC-3.7□□□□□ -3
APOBP04114 RNU6-718P-201ENST00000516166 105 ntBASIC-3.71□□□□□ -3
APOBP04114 RNU6-1137P-201ENST00000517073 99 ntBASIC-3.73□□□□□ -3.01
APOBP04114 Y_RNA.350-201ENST00000365409 98 ntBASIC-3.73□□□□□ -3.01
APOBP04114 RNU6-1275P-201ENST00000391087 107 ntBASIC-3.74□□□□□ -3.01
APOBP04114 Y_RNA.619-201ENST00000410951 90 ntBASIC-3.74□□□□□ -3.01
APOBP04114 MIR4666B-201ENST00000578142 81 ntBASIC-3.74□□□□□ -3.01
APOBP04114 RNU6-471P-201ENST00000383944 106 ntBASIC-3.74□□□□□ -3.01
APOBP04114 RNU6-257P-201ENST00000410238 98 ntBASIC-3.74□□□□□ -3.01
APOBP04114 MTND5P20-201ENST00000448677 143 ntBASIC-3.75□□□□□ -3.01
APOBP04114 RNU6-474P-201ENST00000384243 107 ntBASIC-3.75□□□□□ -3.01
APOBP04114 MIR5588-201ENST00000581890 63 ntBASIC-3.76□□□□□ -3.01
APOBP04114 Y_RNA.318-201ENST00000365131 97 ntBASIC-3.77□□□□□ -3.01
APOBP04114 RNU6-200P-201ENST00000364743 107 ntBASIC-3.77□□□□□ -3.01
APOBP04114 RNU6-589P-201ENST00000516485 107 ntBASIC-3.78□□□□□ -3.01
APOBP04114 MTND4P29-201ENST00000503122 1372 ntBASIC-3.78□□□□□ -3.01
APOBP04114 RNU6-936P-201ENST00000384005 107 ntBASIC-3.78□□□□□ -3.01
APOBP04114 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-3.78□□□□□ -3.01
APOBP04114 RNU6-111P-201ENST00000517179 105 ntBASIC-3.78□□□□□ -3.01
APOBP04114 RNU6-242P-201ENST00000384359 107 ntBASIC-3.79□□□□□ -3.02
APOBP04114 AL117351.2-201ENST00000513571 157 ntBASIC-3.8□□□□□ -3.02
APOBP04114 U6.111-201ENST00000636093 83 ntBASIC-3.8□□□□□ -3.02
APOBP04114 MT-TD-201ENST00000387419 68 ntBASIC-3.81□□□□□ -3.02
APOBP04114 Y_RNA.593-201ENST00000410292 98 ntBASIC-3.81□□□□□ -3.02
APOBP04114 RNU6-1276P-201ENST00000365372 104 ntBASIC-3.82□□□□□ -3.02
APOBP04114 MIR548T-201ENST00000408369 74 ntBASIC-3.82□□□□□ -3.02
APOBP04114 Y_RNA.535-201ENST00000384612 99 ntBASIC-3.82□□□□□ -3.02
APOBP04114 MIR3974-201ENST00000637126 96 ntBASIC-3.82□□□□□ -3.02
APOBP04114 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-3.83□□□□□ -3.02
APOBP04114 RNU6-32P-201ENST00000383948 107 ntBASIC-3.84□□□□□ -3.02
APOBP04114 RNU6-13P-201ENST00000384248 107 ntBASIC-3.84□□□□□ -3.02
APOBP04114 RNU6-12P-201ENST00000384604 107 ntBASIC-3.84□□□□□ -3.02
APOBP04114 RNU6-41P-201ENST00000384741 107 ntBASIC-3.84□□□□□ -3.02
APOBP04114 MIR3171-201ENST00000584270 74 ntBASIC-3.86□□□□□ -3.03
APOBP04114 Y_RNA.489-201ENST00000384410 101 ntBASIC-3.87□□□□□ -3.03
APOBP04114 Y_RNA.717-201ENST00000517106 92 ntBASIC-3.88□□□□□ -3.03
Retrieved 100 of 98,524 protein–RNA pairs in 275 ms