Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 RNU6-633P-201ENST00000362612 103 ntBASIC-2.12□□□□□ -2.75
COL4A5P29400 RNU6-1045P-201ENST00000516321 107 ntBASIC-2.12□□□□□ -2.75
COL4A5P29400 SNORD116-21-201ENST00000384507 92 ntBASIC-2.12□□□□□ -2.75
COL4A5P29400 RNU6-554P-201ENST00000410466 106 ntBASIC-2.12□□□□□ -2.75
COL4A5P29400 Y_RNA.712-201ENST00000517011 92 ntBASIC-2.12□□□□□ -2.75
COL4A5P29400 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-2.12□□□□□ -2.75
COL4A5P29400 RNU6-755P-201ENST00000364400 103 ntBASIC-2.13□□□□□ -2.75
COL4A5P29400 SNORD116-22-201ENST00000384430 92 ntBASIC-2.13□□□□□ -2.75
COL4A5P29400 MIR590-201ENST00000385008 97 ntBASIC-2.13□□□□□ -2.75
COL4A5P29400 SNORD33.1-201ENST00000516213 88 ntBASIC-2.13□□□□□ -2.75
COL4A5P29400 RNA5SP173-201ENST00000364857 136 ntBASIC-2.14□□□□□ -2.75
COL4A5P29400 RNU6-380P-201ENST00000410207 107 ntBASIC-2.14□□□□□ -2.75
COL4A5P29400 RNU6-172P-201ENST00000411000 93 ntBASIC-2.14□□□□□ -2.75
COL4A5P29400 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.15□□□□□ -2.75
COL4A5P29400 MTND5P41-201ENST00000517498 206 ntBASIC-2.15□□□□□ -2.75
COL4A5P29400 RNU6-590P-201ENST00000365039 107 ntBASIC-2.15□□□□□ -2.75
COL4A5P29400 RNU6-300P-201ENST00000459080 104 ntBASIC-2.15□□□□□ -2.75
COL4A5P29400 SNORD45.2-201ENST00000363552 72 ntBASIC-2.16□□□□□ -2.76
COL4A5P29400 Y_RNA.663-201ENST00000516043 101 ntBASIC-2.16□□□□□ -2.76
COL4A5P29400 RNU6-388P-201ENST00000517012 105 ntBASIC-2.16□□□□□ -2.76
COL4A5P29400 RNU6-389P-201ENST00000517048 105 ntBASIC-2.16□□□□□ -2.76
COL4A5P29400 RNU6-330P-201ENST00000363015 107 ntBASIC-2.17□□□□□ -2.76
COL4A5P29400 AL359920.1-201ENST00000618332 176 ntBASIC-2.17□□□□□ -2.76
COL4A5P29400 RNU6-659P-201ENST00000516454 104 ntBASIC-2.18□□□□□ -2.76
COL4A5P29400 SNORD113.1-201ENST00000363280 73 ntBASIC-2.18□□□□□ -2.76
COL4A5P29400 RNU7-160P-201ENST00000516660 62 ntBASIC-2.18□□□□□ -2.76
COL4A5P29400 RNU6-557P-201ENST00000516842 110 ntBASIC-2.18□□□□□ -2.76
COL4A5P29400 RNU6-1169P-201ENST00000363537 103 ntBASIC-2.19□□□□□ -2.76
COL4A5P29400 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.19□□□□□ -2.76
COL4A5P29400 AC074348.1-201ENST00000426503 132 ntBASIC-2.19□□□□□ -2.76
COL4A5P29400 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-2.19□□□□□ -2.76
COL4A5P29400 RNU6-737P-201ENST00000365370 107 ntBASIC-2.2□□□□□ -2.76
COL4A5P29400 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-2.2□□□□□ -2.76
COL4A5P29400 RNU6-686P-201ENST00000364839 107 ntBASIC-2.21□□□□□ -2.76
COL4A5P29400 RNU6-604P-201ENST00000390917 100 ntBASIC-2.21□□□□□ -2.76
COL4A5P29400 AP001318.4-201ENST00000616637 121 ntBASIC-2.21□□□□□ -2.76
COL4A5P29400 MIR4426-201ENST00000640330 63 ntBASIC-2.21□□□□□ -2.76
COL4A5P29400 MT-TG-201ENST00000387429 68 ntBASIC-2.22□□□□□ -2.76
COL4A5P29400 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-2.22□□□□□ -2.76
COL4A5P29400 MIR4668-201ENST00000582284 70 ntBASIC-2.22□□□□□ -2.76
COL4A5P29400 RNU6-810P-201ENST00000364001 107 ntBASIC-2.22□□□□□ -2.77
COL4A5P29400 MTATP8P2-201ENST00000435212 202 ntBASIC-2.22□□□□□ -2.77
COL4A5P29400 RNU7-200P-201ENST00000516105 62 ntBASIC-2.22□□□□□ -2.77
COL4A5P29400 AC062037.1-201ENST00000605302 128 ntBASIC-2.22□□□□□ -2.77
COL4A5P29400 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-2.22□□□□□ -2.77
COL4A5P29400 Y_RNA.137-201ENST00000363455 112 ntBASIC-2.23□□□□□ -2.77
COL4A5P29400 MIR124-1-201ENST00000385275 85 ntBASIC-2.23□□□□□ -2.77
COL4A5P29400 AP001094.1-201ENST00000579805 193 ntBASIC-2.23□□□□□ -2.77
COL4A5P29400 Y_RNA.43-201ENST00000362670 111 ntBASIC-2.24□□□□□ -2.77
COL4A5P29400 RNU6-907P-201ENST00000390924 102 ntBASIC-2.24□□□□□ -2.77
COL4A5P29400 Y_RNA.320-201ENST00000365144 102 ntBASIC-2.25□□□□□ -2.77
COL4A5P29400 Y_RNA.544-201ENST00000384650 113 ntBASIC-2.25□□□□□ -2.77
COL4A5P29400 Y_RNA.620-201ENST00000411009 88 ntBASIC-2.25□□□□□ -2.77
COL4A5P29400 AL117351.2-201ENST00000513571 157 ntBASIC-2.25□□□□□ -2.77
COL4A5P29400 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.25□□□□□ -2.77
COL4A5P29400 Y_RNA.218-201ENST00000364218 104 ntBASIC-2.25□□□□□ -2.77
COL4A5P29400 RNU6-463P-201ENST00000384340 107 ntBASIC-2.25□□□□□ -2.77
COL4A5P29400 Y_RNA.520-201ENST00000384556 102 ntBASIC-2.25□□□□□ -2.77
COL4A5P29400 RNU6-109P-201ENST00000516364 107 ntBASIC-2.25□□□□□ -2.77
COL4A5P29400 RNU6-184P-201ENST00000516514 107 ntBASIC-2.25□□□□□ -2.77
COL4A5P29400 RNU6-886P-201ENST00000384319 105 ntBASIC-2.26□□□□□ -2.77
COL4A5P29400 SNORA19-201ENST00000384737 128 ntBASIC-2.26□□□□□ -2.77
COL4A5P29400 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.27□□□□□ -2.77
COL4A5P29400 Y_RNA.290-201ENST00000364879 114 ntBASIC-2.27□□□□□ -2.77
COL4A5P29400 AC006160.2-201ENST00000637708 154 ntBASIC-2.27□□□□□ -2.77
COL4A5P29400 MIRLET7A1-201ENST00000362295 80 ntBASIC-2.28□□□□□ -2.77
COL4A5P29400 RNU6-1161P-201ENST00000516176 102 ntBASIC-2.28□□□□□ -2.77
COL4A5P29400 Y_RNA.17-201ENST00000362433 111 ntBASIC-2.28□□□□□ -2.77
COL4A5P29400 SNORD115-45-201ENST00000391078 81 ntBASIC-2.28□□□□□ -2.77
COL4A5P29400 RNU6-402P-201ENST00000410678 103 ntBASIC-2.28□□□□□ -2.77
COL4A5P29400 RNU6-822P-201ENST00000362707 106 ntBASIC-2.29□□□□□ -2.78
COL4A5P29400 RNU6-742P-201ENST00000365289 107 ntBASIC-2.29□□□□□ -2.78
COL4A5P29400 MIR7110-201ENST00000612638 86 ntBASIC-2.29□□□□□ -2.78
COL4A5P29400 RNU6-665P-201ENST00000384639 107 ntBASIC-2.3□□□□□ -2.78
COL4A5P29400 RNU6-542P-201ENST00000516405 103 ntBASIC-2.3□□□□□ -2.78
COL4A5P29400 Y_RNA.611-201ENST00000410682 108 ntBASIC-2.31□□□□□ -2.78
COL4A5P29400 Y_RNA.206-201ENST00000364136 102 ntBASIC-2.31□□□□□ -2.78
COL4A5P29400 Y_RNA.382-201ENST00000365672 114 ntBASIC-2.31□□□□□ -2.78
COL4A5P29400 Y_RNA.464-201ENST00000384282 110 ntBASIC-2.31□□□□□ -2.78
COL4A5P29400 SNORD116.2-201ENST00000391251 93 ntBASIC-2.31□□□□□ -2.78
COL4A5P29400 SNORA63.4-201ENST00000362763 126 ntBASIC-2.32□□□□□ -2.78
COL4A5P29400 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.32□□□□□ -2.78
COL4A5P29400 RNY1P5-201ENST00000383890 115 ntBASIC-2.33□□□□□ -2.78
COL4A5P29400 RNU6-1340P-201ENST00000384438 107 ntBASIC-2.33□□□□□ -2.78
COL4A5P29400 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-2.33□□□□□ -2.78
COL4A5P29400 RNU6-1011P-201ENST00000384668 107 ntBASIC-2.34□□□□□ -2.78
COL4A5P29400 AL451105.1-201ENST00000450005 189 ntBASIC-2.34□□□□□ -2.78
COL4A5P29400 MIR548BB-201ENST00000626714 66 ntBASIC-2.34□□□□□ -2.78
COL4A5P29400 RNU6-854P-201ENST00000364036 107 ntBASIC-2.34□□□□□ -2.78
COL4A5P29400 RNU6-1124P-201ENST00000384169 107 ntBASIC-2.34□□□□□ -2.78
COL4A5P29400 SNORD45A-201ENST00000384512 84 ntBASIC-2.34□□□□□ -2.78
COL4A5P29400 SNORA40B-201ENST00000385573 128 ntBASIC-2.34□□□□□ -2.78
COL4A5P29400 MIR154-201ENST00000385243 84 ntBASIC-2.35□□□□□ -2.79
COL4A5P29400 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.35□□□□□ -2.79
COL4A5P29400 SNORD116-14-201ENST00000383894 92 ntBASIC-2.36□□□□□ -2.79
COL4A5P29400 SNORD116-17-201ENST00000383929 92 ntBASIC-2.36□□□□□ -2.79
COL4A5P29400 SNORD116-15-201ENST00000384445 92 ntBASIC-2.36□□□□□ -2.79
COL4A5P29400 SNORD116-19-201ENST00000384729 92 ntBASIC-2.36□□□□□ -2.79
COL4A5P29400 MIR656-201ENST00000385224 78 ntBASIC-2.36□□□□□ -2.79
COL4A5P29400 RNU6-346P-201ENST00000516288 111 ntBASIC-2.36□□□□□ -2.79
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms