Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 RNU6-402P-201ENST00000410678 103 ntBASIC-2.1□□□□□ -2.75
PKNOX2Q96KN3 MALAT1.1-201ENST00000618249 95 ntBASIC-2.1□□□□□ -2.75
PKNOX2Q96KN3 U4.4-201ENST00000620626 117 ntBASIC-2.1□□□□□ -2.75
PKNOX2Q96KN3 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.11□□□□□ -2.75
PKNOX2Q96KN3 RNU6-608P-201ENST00000383927 104 ntBASIC-2.11□□□□□ -2.75
PKNOX2Q96KN3 RNU6-1152P-201ENST00000384576 107 ntBASIC-2.11□□□□□ -2.75
PKNOX2Q96KN3 RNU6-598P-201ENST00000364017 105 ntBASIC-2.12□□□□□ -2.75
PKNOX2Q96KN3 RNU6-129P-201ENST00000391022 107 ntBASIC-2.12□□□□□ -2.75
PKNOX2Q96KN3 SNORA40.13-201ENST00000516379 120 ntBASIC-2.12□□□□□ -2.75
PKNOX2Q96KN3 RNU6-267P-201ENST00000516714 103 ntBASIC-2.12□□□□□ -2.75
PKNOX2Q96KN3 MIR4756-201ENST00000577874 78 ntBASIC-2.12□□□□□ -2.75
PKNOX2Q96KN3 MIR450A1-201ENST00000362262 91 ntBASIC-2.13□□□□□ -2.75
PKNOX2Q96KN3 Y_RNA.532-201ENST00000384590 113 ntBASIC-2.13□□□□□ -2.75
PKNOX2Q96KN3 RNU6-1168P-201ENST00000390831 104 ntBASIC-2.13□□□□□ -2.75
PKNOX2Q96KN3 MTND4LP1-201ENST00000446263 157 ntBASIC-2.13□□□□□ -2.75
PKNOX2Q96KN3 MIR548V-201ENST00000584165 80 ntBASIC-2.13□□□□□ -2.75
PKNOX2Q96KN3 AP001318.4-201ENST00000616637 121 ntBASIC-2.13□□□□□ -2.75
PKNOX2Q96KN3 MIR664B-201ENST00000626756 61 ntBASIC-2.14□□□□□ -2.75
PKNOX2Q96KN3 MIR1297-201ENST00000637311 77 ntBASIC-2.14□□□□□ -2.75
PKNOX2Q96KN3 RNY4P7-201ENST00000364600 96 ntBASIC-2.15□□□□□ -2.75
PKNOX2Q96KN3 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.15□□□□□ -2.75
PKNOX2Q96KN3 Y_RNA.611-201ENST00000410682 108 ntBASIC-2.16□□□□□ -2.76
PKNOX2Q96KN3 MIR23C-201ENST00000579846 100 ntBASIC-2.16□□□□□ -2.76
PKNOX2Q96KN3 MIR3123-201ENST00000583417 75 ntBASIC-2.16□□□□□ -2.76
PKNOX2Q96KN3 RNA5SP215-201ENST00000363440 122 ntBASIC-2.17□□□□□ -2.76
PKNOX2Q96KN3 RNU6-841P-201ENST00000383872 107 ntBASIC-2.17□□□□□ -2.76
PKNOX2Q96KN3 MIR520D-201ENST00000385002 87 ntBASIC-2.17□□□□□ -2.76
PKNOX2Q96KN3 RNU6-22P-201ENST00000384355 107 ntBASIC-2.18□□□□□ -2.76
PKNOX2Q96KN3 TMSB4XP3-201ENST00000445144 114 ntBASIC-2.18□□□□□ -2.76
PKNOX2Q96KN3 MIR548AM-201ENST00000584298 74 ntBASIC-2.18□□□□□ -2.76
PKNOX2Q96KN3 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.19□□□□□ -2.76
PKNOX2Q96KN3 RNU6-380P-201ENST00000410207 107 ntBASIC-2.19□□□□□ -2.76
PKNOX2Q96KN3 MIR4484-201ENST00000582855 83 ntBASIC-2.19□□□□□ -2.76
PKNOX2Q96KN3 MIR8053-201ENST00000613344 75 ntBASIC-2.19□□□□□ -2.76
PKNOX2Q96KN3 U2.18-201ENST00000622185 84 ntBASIC-2.19□□□□□ -2.76
PKNOX2Q96KN3 RNU6-1117P-201ENST00000384525 104 ntBASIC-2.2□□□□□ -2.76
PKNOX2Q96KN3 MIR630-201ENST00000384957 97 ntBASIC-2.2□□□□□ -2.76
PKNOX2Q96KN3 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.2□□□□□ -2.76
PKNOX2Q96KN3 AC120024.2-201ENST00000576526 175 ntBASIC-2.2□□□□□ -2.76
PKNOX2Q96KN3 RNU6-668P-201ENST00000364180 107 ntBASIC-2.21□□□□□ -2.76
PKNOX2Q96KN3 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.21□□□□□ -2.76
PKNOX2Q96KN3 RNU6-563P-201ENST00000364872 108 ntBASIC-2.21□□□□□ -2.76
PKNOX2Q96KN3 Y_RNA.403-201ENST00000383977 101 ntBASIC-2.21□□□□□ -2.76
PKNOX2Q96KN3 SNORD113-2-201ENST00000391082 72 ntBASIC-2.21□□□□□ -2.76
PKNOX2Q96KN3 RNU6-980P-201ENST00000516925 103 ntBASIC-2.21□□□□□ -2.76
PKNOX2Q96KN3 AC006160.2-201ENST00000637708 154 ntBASIC-2.21□□□□□ -2.76
PKNOX2Q96KN3 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.21□□□□□ -2.76
PKNOX2Q96KN3 Y_RNA.273-201ENST00000364703 102 ntBASIC-2.22□□□□□ -2.76
PKNOX2Q96KN3 SNORD54-201ENST00000459159 67 ntBASIC-2.22□□□□□ -2.76
PKNOX2Q96KN3 RNU6-118P-201ENST00000516552 102 ntBASIC-2.22□□□□□ -2.76
PKNOX2Q96KN3 RNU6-675P-201ENST00000384236 104 ntBASIC-2.23□□□□□ -2.77
PKNOX2Q96KN3 SNORD116-16-201ENST00000384533 92 ntBASIC-2.23□□□□□ -2.77
PKNOX2Q96KN3 RNU6-1154P-201ENST00000391001 104 ntBASIC-2.23□□□□□ -2.77
PKNOX2Q96KN3 RNU6-1111P-201ENST00000391118 107 ntBASIC-2.23□□□□□ -2.77
PKNOX2Q96KN3 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.23□□□□□ -2.77
PKNOX2Q96KN3 SNORD113.1-201ENST00000363280 73 ntBASIC-2.24□□□□□ -2.77
PKNOX2Q96KN3 RNA5SP173-201ENST00000364857 136 ntBASIC-2.24□□□□□ -2.77
PKNOX2Q96KN3 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.24□□□□□ -2.77
PKNOX2Q96KN3 MIR548AA1-201ENST00000384971 97 ntBASIC-2.24□□□□□ -2.77
PKNOX2Q96KN3 RNY4P18-201ENST00000391107 89 ntBASIC-2.24□□□□□ -2.77
PKNOX2Q96KN3 RNU4-88P-201ENST00000411220 86 ntBASIC-2.25□□□□□ -2.77
PKNOX2Q96KN3 MIR3170-201ENST00000582699 77 ntBASIC-2.25□□□□□ -2.77
PKNOX2Q96KN3 RNU6-313P-201ENST00000516317 112 ntBASIC-2.26□□□□□ -2.77
PKNOX2Q96KN3 RNU6-258P-201ENST00000390884 101 ntBASIC-2.27□□□□□ -2.77
PKNOX2Q96KN3 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.27□□□□□ -2.77
PKNOX2Q96KN3 MIR488-201ENST00000365739 83 ntBASIC-2.28□□□□□ -2.77
PKNOX2Q96KN3 RNU6-844P-201ENST00000517175 102 ntBASIC-2.28□□□□□ -2.77
PKNOX2Q96KN3 MIR3668-201ENST00000582138 75 ntBASIC-2.28□□□□□ -2.77
PKNOX2Q96KN3 SNORA63.4-201ENST00000362763 126 ntBASIC-2.29□□□□□ -2.78
PKNOX2Q96KN3 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.29□□□□□ -2.78
PKNOX2Q96KN3 RNU6-315P-201ENST00000362666 107 ntBASIC-2.3□□□□□ -2.78
PKNOX2Q96KN3 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.3□□□□□ -2.78
PKNOX2Q96KN3 RNU6-755P-201ENST00000364400 103 ntBASIC-2.3□□□□□ -2.78
PKNOX2Q96KN3 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.3□□□□□ -2.78
PKNOX2Q96KN3 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.3□□□□□ -2.78
PKNOX2Q96KN3 SNORD45A-201ENST00000384512 84 ntBASIC-2.31□□□□□ -2.78
PKNOX2Q96KN3 RNA5SP93-201ENST00000362525 114 ntBASIC-2.32□□□□□ -2.78
PKNOX2Q96KN3 RNU6-247P-201ENST00000362636 107 ntBASIC-2.32□□□□□ -2.78
PKNOX2Q96KN3 RNA5SP405-201ENST00000363059 114 ntBASIC-2.32□□□□□ -2.78
PKNOX2Q96KN3 RNU6-640P-201ENST00000363693 105 ntBASIC-2.32□□□□□ -2.78
PKNOX2Q96KN3 RNU6-32P-201ENST00000383948 107 ntBASIC-2.32□□□□□ -2.78
PKNOX2Q96KN3 RNU6-13P-201ENST00000384248 107 ntBASIC-2.32□□□□□ -2.78
PKNOX2Q96KN3 RNU6-12P-201ENST00000384604 107 ntBASIC-2.32□□□□□ -2.78
PKNOX2Q96KN3 RNU6-41P-201ENST00000384741 107 ntBASIC-2.32□□□□□ -2.78
PKNOX2Q96KN3 SNORA41B-201ENST00000384785 128 ntBASIC-2.32□□□□□ -2.78
PKNOX2Q96KN3 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.32□□□□□ -2.78
PKNOX2Q96KN3 MIR3671-201ENST00000580455 88 ntBASIC-2.32□□□□□ -2.78
PKNOX2Q96KN3 RNU6-194P-201ENST00000363862 105 ntBASIC-2.33□□□□□ -2.78
PKNOX2Q96KN3 MIR548M-201ENST00000408260 86 ntBASIC-2.33□□□□□ -2.78
PKNOX2Q96KN3 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.33□□□□□ -2.78
PKNOX2Q96KN3 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.34□□□□□ -2.78
PKNOX2Q96KN3 SNORD1B-201ENST00000363091 84 ntBASIC-2.34□□□□□ -2.78
PKNOX2Q96KN3 Y_RNA.204-201ENST00000364112 102 ntBASIC-2.34□□□□□ -2.78
PKNOX2Q96KN3 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.34□□□□□ -2.78
PKNOX2Q96KN3 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.34□□□□□ -2.78
PKNOX2Q96KN3 MIR664A-201ENST00000626086 82 ntBASIC-2.35□□□□□ -2.79
PKNOX2Q96KN3 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.36□□□□□ -2.79
PKNOX2Q96KN3 Y_RNA.17-201ENST00000362433 111 ntBASIC-2.36□□□□□ -2.79
PKNOX2Q96KN3 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.36□□□□□ -2.79
PKNOX2Q96KN3 RNU6-995P-201ENST00000391244 107 ntBASIC-2.36□□□□□ -2.79
Retrieved 100 of 98,524 protein–RNA pairs in 175.7 ms