Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 MIR548N-201ENST00000408742 75 ntBASIC-3.8□□□□□ -3.02
SRP9P49458 Y_RNA.629-201ENST00000411368 105 ntBASIC-3.8□□□□□ -3.02
SRP9P49458 AC093729.1-201ENST00000513074 128 ntBASIC-3.8□□□□□ -3.02
SRP9P49458 AL117187.1-201ENST00000555482 181 ntBASIC-3.8□□□□□ -3.02
SRP9P49458 MIRLET7A2-201ENST00000362105 72 ntBASIC-3.81□□□□□ -3.02
SRP9P49458 RNU6-633P-201ENST00000362612 103 ntBASIC-3.81□□□□□ -3.02
SRP9P49458 SNORD113-3-201ENST00000364830 72 ntBASIC-3.81□□□□□ -3.02
SRP9P49458 RNU6-804P-201ENST00000384286 107 ntBASIC-3.81□□□□□ -3.02
SRP9P49458 AC062037.2-201ENST00000610137 73 ntBASIC-3.81□□□□□ -3.02
SRP9P49458 SNORD113.1-201ENST00000363280 73 ntBASIC-3.82□□□□□ -3.02
SRP9P49458 RNU6-1324P-201ENST00000384222 107 ntBASIC-3.82□□□□□ -3.02
SRP9P49458 SNX3P1Y-201ENST00000615757 176 ntBASIC-3.82□□□□□ -3.02
SRP9P49458 RNU6-686P-201ENST00000364839 107 ntBASIC-3.83□□□□□ -3.02
SRP9P49458 RNU6-557P-201ENST00000516842 110 ntBASIC-3.83□□□□□ -3.02
SRP9P49458 MIR548S-201ENST00000581352 82 ntBASIC-3.83□□□□□ -3.02
SRP9P49458 MIR4484-201ENST00000582855 83 ntBASIC-3.83□□□□□ -3.02
SRP9P49458 RNU6-694P-201ENST00000364071 147 ntBASIC-3.84□□□□□ -3.02
SRP9P49458 Y_RNA.519-201ENST00000384553 102 ntBASIC-3.84□□□□□ -3.02
SRP9P49458 Y_RNA.532-201ENST00000384590 113 ntBASIC-3.84□□□□□ -3.02
SRP9P49458 MTATP8P2-201ENST00000435212 202 ntBASIC-3.84□□□□□ -3.02
SRP9P49458 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-3.85□□□□□ -3.03
SRP9P49458 RNU6-109P-201ENST00000516364 107 ntBASIC-3.85□□□□□ -3.03
SRP9P49458 RNU6-184P-201ENST00000516514 107 ntBASIC-3.85□□□□□ -3.03
SRP9P49458 RNU6-106P-201ENST00000384405 107 ntBASIC-3.86□□□□□ -3.03
SRP9P49458 SNORA17.4-201ENST00000391287 132 ntBASIC-3.86□□□□□ -3.03
SRP9P49458 MIR8053-201ENST00000613344 75 ntBASIC-3.86□□□□□ -3.03
SRP9P49458 RNU6-230P-201ENST00000362457 104 ntBASIC-3.87□□□□□ -3.03
SRP9P49458 Y_RNA.307-201ENST00000365022 117 ntBASIC-3.87□□□□□ -3.03
SRP9P49458 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-3.87□□□□□ -3.03
SRP9P49458 U6.95-201ENST00000636931 70 ntBASIC-3.87□□□□□ -3.03
SRP9P49458 Y_RNA.93-201ENST00000363066 109 ntBASIC-3.88□□□□□ -3.03
SRP9P49458 RNU6-1325P-201ENST00000364905 105 ntBASIC-3.88□□□□□ -3.03
SRP9P49458 SNORD45A-201ENST00000384512 84 ntBASIC-3.88□□□□□ -3.03
SRP9P49458 MTCYBP6-201ENST00000441810 138 ntBASIC-3.88□□□□□ -3.03
SRP9P49458 RNU6-659P-201ENST00000516454 104 ntBASIC-3.88□□□□□ -3.03
SRP9P49458 MIR4668-201ENST00000582284 70 ntBASIC-3.88□□□□□ -3.03
SRP9P49458 Y_RNA.69-201ENST00000362885 109 ntBASIC-3.89□□□□□ -3.03
SRP9P49458 SNORA40-201ENST00000388090 126 ntBASIC-3.89□□□□□ -3.03
SRP9P49458 Y_RNA.712-201ENST00000517011 92 ntBASIC-3.89□□□□□ -3.03
SRP9P49458 MIRLET7A1-201ENST00000362295 80 ntBASIC-3.9□□□□□ -3.03
SRP9P49458 Y_RNA.219-201ENST00000364232 113 ntBASIC-3.91□□□□□ -3.04
SRP9P49458 RNU6-828P-201ENST00000364876 107 ntBASIC-3.91□□□□□ -3.04
SRP9P49458 MIR1302-5-201ENST00000408164 150 ntBASIC-3.91□□□□□ -3.04
SRP9P49458 RNU7-160P-201ENST00000516660 62 ntBASIC-3.91□□□□□ -3.04
SRP9P49458 RNU6-912P-201ENST00000363800 104 ntBASIC-3.92□□□□□ -3.04
SRP9P49458 Y_RNA.290-201ENST00000364879 114 ntBASIC-3.92□□□□□ -3.04
SRP9P49458 Y_RNA.422-201ENST00000384054 114 ntBASIC-3.92□□□□□ -3.04
SRP9P49458 Y_RNA.535-201ENST00000384612 99 ntBASIC-3.93□□□□□ -3.04
SRP9P49458 SNORD116-21-201ENST00000384507 92 ntBASIC-3.94□□□□□ -3.04
SRP9P49458 AP001318.4-201ENST00000616637 121 ntBASIC-3.94□□□□□ -3.04
SRP9P49458 SNORA63.4-201ENST00000362763 126 ntBASIC-3.95□□□□□ -3.04
SRP9P49458 RNU6-361P-201ENST00000364454 107 ntBASIC-3.95□□□□□ -3.04
SRP9P49458 RNU6-402P-201ENST00000410678 103 ntBASIC-3.95□□□□□ -3.04
SRP9P49458 RNU6-789P-201ENST00000517105 102 ntBASIC-3.95□□□□□ -3.04
SRP9P49458 AC008737.2-201ENST00000599446 118 ntBASIC-3.95□□□□□ -3.04
SRP9P49458 AC004792.1-201ENST00000614523 137 ntBASIC-3.95□□□□□ -3.04
SRP9P49458 RNU6-755P-201ENST00000364400 103 ntBASIC-3.96□□□□□ -3.04
SRP9P49458 Y_RNA.397-201ENST00000383950 98 ntBASIC-3.96□□□□□ -3.04
SRP9P49458 RNU6-1160P-201ENST00000384546 104 ntBASIC-3.96□□□□□ -3.04
SRP9P49458 RNU6-257P-201ENST00000410238 98 ntBASIC-3.96□□□□□ -3.04
SRP9P49458 RNU6-554P-201ENST00000410466 106 ntBASIC-3.96□□□□□ -3.04
SRP9P49458 RNU6-971P-201ENST00000516920 106 ntBASIC-3.96□□□□□ -3.04
SRP9P49458 MTND5P41-201ENST00000517498 206 ntBASIC-3.96□□□□□ -3.04
SRP9P49458 AC044792.1-201ENST00000593294 196 ntBASIC-3.96□□□□□ -3.04
SRP9P49458 MIR1297-201ENST00000637311 77 ntBASIC-3.96□□□□□ -3.04
SRP9P49458 Y_RNA.818-201ENST00000618813 71 ntBASIC-3.97□□□□□ -3.04
SRP9P49458 RNU6-834P-201ENST00000362367 110 ntBASIC-3.98□□□□□ -3.05
SRP9P49458 MIR1302-3-201ENST00000408128 138 ntBASIC-3.98□□□□□ -3.05
SRP9P49458 Y_RNA.620-201ENST00000411009 88 ntBASIC-3.98□□□□□ -3.05
SRP9P49458 MIR379-201ENST00000362218 67 ntBASIC-3.99□□□□□ -3.05
SRP9P49458 SNORA19-201ENST00000384737 128 ntBASIC-3.99□□□□□ -3.05
SRP9P49458 MIR664A-201ENST00000626086 82 ntBASIC-3.99□□□□□ -3.05
SRP9P49458 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-3.99□□□□□ -3.05
SRP9P49458 Y_RNA.443-201ENST00000384135 111 ntBASIC-4□□□□□ -3.05
SRP9P49458 MIR568-201ENST00000385036 95 ntBASIC-4□□□□□ -3.05
SRP9P49458 MTCYBP9-201ENST00000431021 303 ntBASIC-4□□□□□ -3.05
SRP9P49458 RNU6-810P-201ENST00000364001 107 ntBASIC-4.01□□□□□ -3.05
SRP9P49458 RNU6-530P-201ENST00000391180 107 ntBASIC-4.01□□□□□ -3.05
SRP9P49458 MIR548AJ2-201ENST00000408539 92 ntBASIC-4.02□□□□□ -3.05
SRP9P49458 MIR7110-201ENST00000612638 86 ntBASIC-4.02□□□□□ -3.05
SRP9P49458 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-4.02□□□□□ -3.05
SRP9P49458 MIR548BB-201ENST00000626714 66 ntBASIC-4.03□□□□□ -3.05
SRP9P49458 RNU6-68P-201ENST00000516576 104 ntBASIC-4.05□□□□□ -3.06
SRP9P49458 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-4.05□□□□□ -3.06
SRP9P49458 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-4.05□□□□□ -3.06
SRP9P49458 RNU6-267P-201ENST00000516714 103 ntBASIC-4.06□□□□□ -3.06
SRP9P49458 Y_RNA.59-201ENST00000362828 102 ntBASIC-4.07□□□□□ -3.06
SRP9P49458 SNORD116-22-201ENST00000384430 92 ntBASIC-4.07□□□□□ -3.06
SRP9P49458 RNU6-380P-201ENST00000410207 107 ntBASIC-4.07□□□□□ -3.06
SRP9P49458 RNU6-1079P-201ENST00000362861 110 ntBASIC-4.08□□□□□ -3.06
SRP9P49458 RNU6-219P-201ENST00000364728 107 ntBASIC-4.08□□□□□ -3.06
SRP9P49458 RNU6-200P-201ENST00000364743 107 ntBASIC-4.08□□□□□ -3.06
SRP9P49458 RNU6-1296P-201ENST00000383879 107 ntBASIC-4.08□□□□□ -3.06
SRP9P49458 MIR606-201ENST00000384851 96 ntBASIC-4.08□□□□□ -3.06
SRP9P49458 MIR1254-1-201ENST00000408257 97 ntBASIC-4.08□□□□□ -3.06
SRP9P49458 RNU6-1206P-201ENST00000516339 103 ntBASIC-4.08□□□□□ -3.06
SRP9P49458 MIR4426-201ENST00000640330 63 ntBASIC-4.08□□□□□ -3.06
SRP9P49458 Y_RNA.343-201ENST00000365354 112 ntBASIC-4.09□□□□□ -3.06
SRP9P49458 SNORD116.2-201ENST00000391251 93 ntBASIC-4.09□□□□□ -3.06
SRP9P49458 Y_RNA.434-201ENST00000384090 100 ntBASIC-4.1□□□□□ -3.07
Retrieved 100 of 98,524 protein–RNA pairs in 7.4 ms