Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 Y_RNA.709-201ENST00000516952 92 ntBASIC-2.48□□□□□ -2.81
HLA-DPA1P20036 MIR548AM-201ENST00000584298 74 ntBASIC-2.48□□□□□ -2.81
HLA-DPA1P20036 RNU6-686P-201ENST00000364839 107 ntBASIC-2.49□□□□□ -2.81
HLA-DPA1P20036 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.49□□□□□ -2.81
HLA-DPA1P20036 RNU6-258P-201ENST00000390884 101 ntBASIC-2.49□□□□□ -2.81
HLA-DPA1P20036 MIR664B-201ENST00000626756 61 ntBASIC-2.49□□□□□ -2.81
HLA-DPA1P20036 MIR450A1-201ENST00000362262 91 ntBASIC-2.5□□□□□ -2.81
HLA-DPA1P20036 SNORD45.1-201ENST00000363181 77 ntBASIC-2.5□□□□□ -2.81
HLA-DPA1P20036 RNU6-402P-201ENST00000410678 103 ntBASIC-2.51□□□□□ -2.81
HLA-DPA1P20036 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.51□□□□□ -2.81
HLA-DPA1P20036 RNU6-219P-201ENST00000364728 107 ntBASIC-2.52□□□□□ -2.81
HLA-DPA1P20036 RNU6-1168P-201ENST00000390831 104 ntBASIC-2.52□□□□□ -2.81
HLA-DPA1P20036 AC074348.1-201ENST00000426503 132 ntBASIC-2.52□□□□□ -2.81
HLA-DPA1P20036 SNORA40.13-201ENST00000516379 120 ntBASIC-2.52□□□□□ -2.81
HLA-DPA1P20036 MIR548V-201ENST00000584165 80 ntBASIC-2.52□□□□□ -2.81
HLA-DPA1P20036 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.52□□□□□ -2.81
HLA-DPA1P20036 MIR548BB-201ENST00000626714 66 ntBASIC-2.52□□□□□ -2.81
HLA-DPA1P20036 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.53□□□□□ -2.81
HLA-DPA1P20036 MALAT1.1-201ENST00000618249 95 ntBASIC-2.53□□□□□ -2.81
HLA-DPA1P20036 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.54□□□□□ -2.82
HLA-DPA1P20036 MIR548AA1-201ENST00000384971 97 ntBASIC-2.54□□□□□ -2.82
HLA-DPA1P20036 TMSB4XP3-201ENST00000445144 114 ntBASIC-2.54□□□□□ -2.82
HLA-DPA1P20036 RNU6-267P-201ENST00000516714 103 ntBASIC-2.54□□□□□ -2.82
HLA-DPA1P20036 RNU6-247P-201ENST00000362636 107 ntBASIC-2.55□□□□□ -2.82
HLA-DPA1P20036 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.55□□□□□ -2.82
HLA-DPA1P20036 AP001318.4-201ENST00000616637 121 ntBASIC-2.55□□□□□ -2.82
HLA-DPA1P20036 RNU6-980P-201ENST00000516925 103 ntBASIC-2.56□□□□□ -2.82
HLA-DPA1P20036 MIRLET7A1-201ENST00000362295 80 ntBASIC-2.57□□□□□ -2.82
HLA-DPA1P20036 RNU6-22P-201ENST00000384355 107 ntBASIC-2.57□□□□□ -2.82
HLA-DPA1P20036 SNORD116-16-201ENST00000384533 92 ntBASIC-2.57□□□□□ -2.82
HLA-DPA1P20036 MIR630-201ENST00000384957 97 ntBASIC-2.57□□□□□ -2.82
HLA-DPA1P20036 RNU6-129P-201ENST00000391022 107 ntBASIC-2.57□□□□□ -2.82
HLA-DPA1P20036 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.58□□□□□ -2.82
HLA-DPA1P20036 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.58□□□□□ -2.82
HLA-DPA1P20036 RNU6-497P-201ENST00000365316 104 ntBASIC-2.58□□□□□ -2.82
HLA-DPA1P20036 RNU6-1117P-201ENST00000384525 104 ntBASIC-2.58□□□□□ -2.82
HLA-DPA1P20036 SNORD113-2-201ENST00000391082 72 ntBASIC-2.58□□□□□ -2.82
HLA-DPA1P20036 Y_RNA.611-201ENST00000410682 108 ntBASIC-2.58□□□□□ -2.82
HLA-DPA1P20036 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.58□□□□□ -2.82
HLA-DPA1P20036 MIR3668-201ENST00000582138 75 ntBASIC-2.58□□□□□ -2.82
HLA-DPA1P20036 RNU4-88P-201ENST00000411220 86 ntBASIC-2.59□□□□□ -2.82
HLA-DPA1P20036 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.59□□□□□ -2.82
HLA-DPA1P20036 AC013734.1-201ENST00000619329 111 ntBASIC-2.59□□□□□ -2.82
HLA-DPA1P20036 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.59□□□□□ -2.82
HLA-DPA1P20036 SNORD1B-201ENST00000363091 84 ntBASIC-2.6□□□□□ -2.83
HLA-DPA1P20036 MTND4LP1-201ENST00000446263 157 ntBASIC-2.6□□□□□ -2.83
HLA-DPA1P20036 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.6□□□□□ -2.83
HLA-DPA1P20036 RNU6-1081P-201ENST00000384537 107 ntBASIC-2.61□□□□□ -2.83
HLA-DPA1P20036 RNU6-1154P-201ENST00000391001 104 ntBASIC-2.61□□□□□ -2.83
HLA-DPA1P20036 AC005520.4-201ENST00000604337 90 ntBASIC-2.61□□□□□ -2.83
HLA-DPA1P20036 MIR1297-201ENST00000637311 77 ntBASIC-2.61□□□□□ -2.83
HLA-DPA1P20036 Y_RNA.532-201ENST00000384590 113 ntBASIC-2.62□□□□□ -2.83
HLA-DPA1P20036 RNU6-380P-201ENST00000410207 107 ntBASIC-2.62□□□□□ -2.83
HLA-DPA1P20036 SNORA41B-201ENST00000384785 128 ntBASIC-2.63□□□□□ -2.83
HLA-DPA1P20036 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.63□□□□□ -2.83
HLA-DPA1P20036 RNU6-313P-201ENST00000516317 112 ntBASIC-2.64□□□□□ -2.83
HLA-DPA1P20036 MIR4484-201ENST00000582855 83 ntBASIC-2.64□□□□□ -2.83
HLA-DPA1P20036 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.64□□□□□ -2.83
HLA-DPA1P20036 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.65□□□□□ -2.83
HLA-DPA1P20036 MIR3671-201ENST00000580455 88 ntBASIC-2.65□□□□□ -2.83
HLA-DPA1P20036 U6.97-201ENST00000636904 101 ntBASIC-2.65□□□□□ -2.83
HLA-DPA1P20036 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.66□□□□□ -2.84
HLA-DPA1P20036 SNORA27.2-201ENST00000363365 126 ntBASIC-2.67□□□□□ -2.84
HLA-DPA1P20036 RNA5SP215-201ENST00000363440 122 ntBASIC-2.67□□□□□ -2.84
HLA-DPA1P20036 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.67□□□□□ -2.84
HLA-DPA1P20036 RNY4P18-201ENST00000391107 89 ntBASIC-2.67□□□□□ -2.84
HLA-DPA1P20036 SNORD63.2-201ENST00000516303 64 ntBASIC-2.67□□□□□ -2.84
HLA-DPA1P20036 RNU7-151P-201ENST00000516930 53 ntBASIC-2.67□□□□□ -2.84
HLA-DPA1P20036 RNU6-668P-201ENST00000364180 107 ntBASIC-2.68□□□□□ -2.84
HLA-DPA1P20036 SNORD115-31-201ENST00000365318 82 ntBASIC-2.68□□□□□ -2.84
HLA-DPA1P20036 RNU6-669P-201ENST00000365575 107 ntBASIC-2.68□□□□□ -2.84
HLA-DPA1P20036 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.68□□□□□ -2.84
HLA-DPA1P20036 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.68□□□□□ -2.84
HLA-DPA1P20036 MIR8053-201ENST00000613344 75 ntBASIC-2.68□□□□□ -2.84
HLA-DPA1P20036 AC006160.2-201ENST00000637708 154 ntBASIC-2.68□□□□□ -2.84
HLA-DPA1P20036 RNU6-119P-201ENST00000364882 107 ntBASIC-2.69□□□□□ -2.84
HLA-DPA1P20036 RNU6-995P-201ENST00000391244 107 ntBASIC-2.69□□□□□ -2.84
HLA-DPA1P20036 MIR548M-201ENST00000408260 86 ntBASIC-2.69□□□□□ -2.84
HLA-DPA1P20036 RNA5SP405-201ENST00000363059 114 ntBASIC-2.7□□□□□ -2.84
HLA-DPA1P20036 MIR579-201ENST00000385221 98 ntBASIC-2.7□□□□□ -2.84
HLA-DPA1P20036 RNY3P8-201ENST00000411366 126 ntBASIC-2.7□□□□□ -2.84
HLA-DPA1P20036 snoU13.10-201ENST00000459301 103 ntBASIC-2.7□□□□□ -2.84
HLA-DPA1P20036 MIR548W-201ENST00000581970 74 ntBASIC-2.7□□□□□ -2.84
HLA-DPA1P20036 Y_RNA.273-201ENST00000364703 102 ntBASIC-2.71□□□□□ -2.84
HLA-DPA1P20036 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.72□□□□□ -2.84
HLA-DPA1P20036 MIR7978-201ENST00000636158 59 ntBASIC-2.72□□□□□ -2.84
HLA-DPA1P20036 SNORD113.1-201ENST00000363280 73 ntBASIC-2.73□□□□□ -2.85
HLA-DPA1P20036 RNU6-675P-201ENST00000384236 104 ntBASIC-2.73□□□□□ -2.85
HLA-DPA1P20036 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.73□□□□□ -2.85
HLA-DPA1P20036 RNU6-194P-201ENST00000363862 105 ntBASIC-2.74□□□□□ -2.85
HLA-DPA1P20036 MIR488-201ENST00000365739 83 ntBASIC-2.74□□□□□ -2.85
HLA-DPA1P20036 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.75□□□□□ -2.85
HLA-DPA1P20036 RNA5SP173-201ENST00000364857 136 ntBASIC-2.75□□□□□ -2.85
HLA-DPA1P20036 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.75□□□□□ -2.85
HLA-DPA1P20036 MIR125B1-201ENST00000385236 88 ntBASIC-2.75□□□□□ -2.85
HLA-DPA1P20036 RNU6-172P-201ENST00000411000 93 ntBASIC-2.75□□□□□ -2.85
HLA-DPA1P20036 RNU6-523P-201ENST00000516304 54 ntBASIC-2.75□□□□□ -2.85
HLA-DPA1P20036 RNU6-118P-201ENST00000516552 102 ntBASIC-2.76□□□□□ -2.85
HLA-DPA1P20036 RNU6-844P-201ENST00000517175 102 ntBASIC-2.76□□□□□ -2.85
HLA-DPA1P20036 RNU6-32P-201ENST00000383948 107 ntBASIC-2.77□□□□□ -2.85
Retrieved 100 of 98,524 protein–RNA pairs in 173.1 ms