Protein–RNA interactions for Protein: O60906

SMPD2, Sphingomyelin phosphodiesterase 2, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD2O60906 RNU6-258P-201ENST00000390884 101 ntBASIC-1.8□□□□□ -2.7
SMPD2O60906 MIR23C-201ENST00000579846 100 ntBASIC-1.8□□□□□ -2.7
SMPD2O60906 U4.4-201ENST00000620626 117 ntBASIC-1.8□□□□□ -2.7
SMPD2O60906 RNU6-698P-201ENST00000363523 107 ntBASIC-1.82□□□□□ -2.7
SMPD2O60906 RNU6-686P-201ENST00000364839 107 ntBASIC-1.82□□□□□ -2.7
SMPD2O60906 RNU6-34P-201ENST00000364874 107 ntBASIC-1.82□□□□□ -2.7
SMPD2O60906 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.82□□□□□ -2.7
SMPD2O60906 SNORD116-22-201ENST00000384430 92 ntBASIC-1.82□□□□□ -2.7
SMPD2O60906 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.82□□□□□ -2.7
SMPD2O60906 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.82□□□□□ -2.7
SMPD2O60906 AC074348.1-201ENST00000426503 132 ntBASIC-1.82□□□□□ -2.7
SMPD2O60906 RNU6-589P-201ENST00000516485 107 ntBASIC-1.82□□□□□ -2.7
SMPD2O60906 MIR548AM-201ENST00000584298 74 ntBASIC-1.82□□□□□ -2.7
SMPD2O60906 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.82□□□□□ -2.7
SMPD2O60906 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.83□□□□□ -2.7
SMPD2O60906 MIR3170-201ENST00000582699 77 ntBASIC-1.83□□□□□ -2.7
SMPD2O60906 MIR3123-201ENST00000583417 75 ntBASIC-1.83□□□□□ -2.7
SMPD2O60906 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.84□□□□□ -2.7
SMPD2O60906 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.84□□□□□ -2.7
SMPD2O60906 MIR548V-201ENST00000584165 80 ntBASIC-1.84□□□□□ -2.7
SMPD2O60906 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.84□□□□□ -2.7
SMPD2O60906 SNORA8.1-201ENST00000384250 140 ntBASIC-1.85□□□□□ -2.71
SMPD2O60906 SNORD54-201ENST00000459159 67 ntBASIC-1.85□□□□□ -2.71
SMPD2O60906 MIR3133-201ENST00000583157 78 ntBASIC-1.85□□□□□ -2.71
SMPD2O60906 AC090425.1-201ENST00000610007 140 ntBASIC-1.85□□□□□ -2.71
SMPD2O60906 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.86□□□□□ -2.71
SMPD2O60906 RNU6-604P-201ENST00000390917 100 ntBASIC-1.86□□□□□ -2.71
SMPD2O60906 MIR1297-201ENST00000637311 77 ntBASIC-1.86□□□□□ -2.71
SMPD2O60906 SNORD45.1-201ENST00000363181 77 ntBASIC-1.87□□□□□ -2.71
SMPD2O60906 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.87□□□□□ -2.71
SMPD2O60906 RNU6-497P-201ENST00000365316 104 ntBASIC-1.87□□□□□ -2.71
SMPD2O60906 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.87□□□□□ -2.71
SMPD2O60906 MIR630-201ENST00000384957 97 ntBASIC-1.87□□□□□ -2.71
SMPD2O60906 AC013734.1-201ENST00000619329 111 ntBASIC-1.87□□□□□ -2.71
SMPD2O60906 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.88□□□□□ -2.71
SMPD2O60906 RNA5SP215-201ENST00000363440 122 ntBASIC-1.88□□□□□ -2.71
SMPD2O60906 SNORD115-31-201ENST00000365318 82 ntBASIC-1.88□□□□□ -2.71
SMPD2O60906 RNU6-81P-201ENST00000365608 104 ntBASIC-1.88□□□□□ -2.71
SMPD2O60906 MTND4LP1-201ENST00000446263 157 ntBASIC-1.88□□□□□ -2.71
SMPD2O60906 RNU6-219P-201ENST00000364728 107 ntBASIC-1.89□□□□□ -2.71
SMPD2O60906 RNU6-841P-201ENST00000383872 107 ntBASIC-1.89□□□□□ -2.71
SMPD2O60906 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.89□□□□□ -2.71
SMPD2O60906 RNU6-380P-201ENST00000410207 107 ntBASIC-1.89□□□□□ -2.71
SMPD2O60906 AL031737.1-201ENST00000450125 223 ntBASIC-1.89□□□□□ -2.71
SMPD2O60906 RNU6-129P-201ENST00000391022 107 ntBASIC-1.9□□□□□ -2.71
SMPD2O60906 SNORD113-2-201ENST00000391082 72 ntBASIC-1.9□□□□□ -2.71
SMPD2O60906 AC005520.4-201ENST00000604337 90 ntBASIC-1.91□□□□□ -2.72
SMPD2O60906 MIR8053-201ENST00000613344 75 ntBASIC-1.91□□□□□ -2.72
SMPD2O60906 MIR548BB-201ENST00000626714 66 ntBASIC-1.91□□□□□ -2.72
SMPD2O60906 U6.97-201ENST00000636904 101 ntBASIC-1.91□□□□□ -2.72
SMPD2O60906 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.92□□□□□ -2.72
SMPD2O60906 SNORA40.13-201ENST00000516379 120 ntBASIC-1.92□□□□□ -2.72
SMPD2O60906 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.92□□□□□ -2.72
SMPD2O60906 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.92□□□□□ -2.72
SMPD2O60906 AL365222.1-201ENST00000614661 98 ntBASIC-1.92□□□□□ -2.72
SMPD2O60906 RNU6-209P-201ENST00000384118 107 ntBASIC-1.93□□□□□ -2.72
SMPD2O60906 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.93□□□□□ -2.72
SMPD2O60906 SNORA41B-201ENST00000384785 128 ntBASIC-1.93□□□□□ -2.72
SMPD2O60906 MALAT1.1-201ENST00000618249 95 ntBASIC-1.93□□□□□ -2.72
SMPD2O60906 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.93□□□□□ -2.72
SMPD2O60906 RNU6-247P-201ENST00000362636 107 ntBASIC-1.94□□□□□ -2.72
SMPD2O60906 RNY4P7-201ENST00000364600 96 ntBASIC-1.94□□□□□ -2.72
SMPD2O60906 RNA5SP173-201ENST00000364857 136 ntBASIC-1.94□□□□□ -2.72
SMPD2O60906 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.94□□□□□ -2.72
SMPD2O60906 MIR548AA1-201ENST00000384971 97 ntBASIC-1.94□□□□□ -2.72
SMPD2O60906 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.94□□□□□ -2.72
SMPD2O60906 RNU6-402P-201ENST00000410678 103 ntBASIC-1.94□□□□□ -2.72
SMPD2O60906 AP001318.4-201ENST00000616637 121 ntBASIC-1.94□□□□□ -2.72
SMPD2O60906 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.95□□□□□ -2.72
SMPD2O60906 SNORD1B-201ENST00000363091 84 ntBASIC-1.95□□□□□ -2.72
SMPD2O60906 MIR579-201ENST00000385221 98 ntBASIC-1.95□□□□□ -2.72
SMPD2O60906 snosnR66.1-201ENST00000391095 99 ntBASIC-1.95□□□□□ -2.72
SMPD2O60906 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.95□□□□□ -2.72
SMPD2O60906 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.95□□□□□ -2.72
SMPD2O60906 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.96□□□□□ -2.72
SMPD2O60906 RNU6-668P-201ENST00000364180 107 ntBASIC-1.96□□□□□ -2.72
SMPD2O60906 SNORD116-16-201ENST00000384533 92 ntBASIC-1.96□□□□□ -2.72
SMPD2O60906 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.96□□□□□ -2.72
SMPD2O60906 MIR548W-201ENST00000581970 74 ntBASIC-1.96□□□□□ -2.72
SMPD2O60906 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.97□□□□□ -2.72
SMPD2O60906 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.97□□□□□ -2.72
SMPD2O60906 MIR4484-201ENST00000582855 83 ntBASIC-1.97□□□□□ -2.72
SMPD2O60906 RNU6-974P-201ENST00000384099 108 ntBASIC-1.98□□□□□ -2.73
SMPD2O60906 RNY3P8-201ENST00000411366 126 ntBASIC-1.98□□□□□ -2.73
SMPD2O60906 RNU6-267P-201ENST00000516714 103 ntBASIC-1.98□□□□□ -2.73
SMPD2O60906 RNU7-151P-201ENST00000516930 53 ntBASIC-1.98□□□□□ -2.73
SMPD2O60906 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.98□□□□□ -2.73
SMPD2O60906 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.99□□□□□ -2.73
SMPD2O60906 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.99□□□□□ -2.73
SMPD2O60906 snoU13.10-201ENST00000459301 103 ntBASIC-1.99□□□□□ -2.73
SMPD2O60906 SNORD63.2-201ENST00000516303 64 ntBASIC-1.99□□□□□ -2.73
SMPD2O60906 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.99□□□□□ -2.73
SMPD2O60906 AC006160.2-201ENST00000637708 154 ntBASIC-1.99□□□□□ -2.73
SMPD2O60906 RNU6-755P-201ENST00000364400 103 ntBASIC-2□□□□□ -2.73
SMPD2O60906 RNU6-669P-201ENST00000365575 107 ntBASIC-2□□□□□ -2.73
SMPD2O60906 Y_RNA.443-201ENST00000384135 111 ntBASIC-2□□□□□ -2.73
SMPD2O60906 TMSB4XP3-201ENST00000445144 114 ntBASIC-2□□□□□ -2.73
SMPD2O60906 MIR4748-201ENST00000578076 82 ntBASIC-2□□□□□ -2.73
SMPD2O60906 MIR450A1-201ENST00000362262 91 ntBASIC-2.01□□□□□ -2.73
SMPD2O60906 SNORD113.1-201ENST00000363280 73 ntBASIC-2.01□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms