Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 SNORA20.1-201ENST00000364790 130 ntBASIC-1.99□□□□□ -2.73
SHOX2O60902 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.99□□□□□ -2.73
SHOX2O60902 MIR548X2-201ENST00000579776 100 ntBASIC-1.99□□□□□ -2.73
SHOX2O60902 RNA5SP215-201ENST00000363440 122 ntBASIC-2□□□□□ -2.73
SHOX2O60902 Y_RNA.398-201ENST00000383952 99 ntBASIC-2□□□□□ -2.73
SHOX2O60902 RNU6-1227P-201ENST00000383981 107 ntBASIC-2□□□□□ -2.73
SHOX2O60902 Y_RNA.434-201ENST00000384090 100 ntBASIC-2□□□□□ -2.73
SHOX2O60902 RNU6-665P-201ENST00000384639 107 ntBASIC-2□□□□□ -2.73
SHOX2O60902 SNORD115-45-201ENST00000391078 81 ntBASIC-2□□□□□ -2.73
SHOX2O60902 RNU6-345P-201ENST00000517001 107 ntBASIC-2□□□□□ -2.73
SHOX2O60902 Y_RNA.61-201ENST00000362835 102 ntBASIC-2.01□□□□□ -2.73
SHOX2O60902 Y_RNA.662-201ENST00000516028 97 ntBASIC-2.01□□□□□ -2.73
SHOX2O60902 MIR202-201ENST00000362219 110 ntBASIC-2.02□□□□□ -2.73
SHOX2O60902 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.02□□□□□ -2.73
SHOX2O60902 SNORD115-37-201ENST00000363768 82 ntBASIC-2.02□□□□□ -2.73
SHOX2O60902 RNU6-972P-201ENST00000391208 107 ntBASIC-2.02□□□□□ -2.73
SHOX2O60902 RNU6-772P-201ENST00000516042 105 ntBASIC-2.02□□□□□ -2.73
SHOX2O60902 Y_RNA.705-201ENST00000516862 110 ntBASIC-2.02□□□□□ -2.73
SHOX2O60902 AC062037.2-201ENST00000610137 73 ntBASIC-2.02□□□□□ -2.73
SHOX2O60902 SNORD116-18-201ENST00000383961 92 ntBASIC-2.03□□□□□ -2.73
SHOX2O60902 RNU6-1160P-201ENST00000384546 104 ntBASIC-2.03□□□□□ -2.73
SHOX2O60902 MIR569-201ENST00000385228 96 ntBASIC-2.03□□□□□ -2.73
SHOX2O60902 AL450471.1-201ENST00000447509 127 ntBASIC-2.03□□□□□ -2.73
SHOX2O60902 Y_RNA.663-201ENST00000516043 101 ntBASIC-2.03□□□□□ -2.73
SHOX2O60902 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.04□□□□□ -2.74
SHOX2O60902 Y_RNA.307-201ENST00000365022 117 ntBASIC-2.04□□□□□ -2.74
SHOX2O60902 MIR1254-1-201ENST00000408257 97 ntBASIC-2.04□□□□□ -2.74
SHOX2O60902 RNU6-887P-201ENST00000410660 100 ntBASIC-2.04□□□□□ -2.74
SHOX2O60902 RNU7-120P-201ENST00000459334 63 ntBASIC-2.04□□□□□ -2.74
SHOX2O60902 Y_RNA.264-201ENST00000364665 102 ntBASIC-2.05□□□□□ -2.74
SHOX2O60902 Y_RNA.297-201ENST00000364950 91 ntBASIC-2.05□□□□□ -2.74
SHOX2O60902 RNU6-737P-201ENST00000365370 107 ntBASIC-2.05□□□□□ -2.74
SHOX2O60902 Y_RNA.459-201ENST00000384251 102 ntBASIC-2.05□□□□□ -2.74
SHOX2O60902 RNU6-649P-201ENST00000384463 107 ntBASIC-2.05□□□□□ -2.74
SHOX2O60902 MIR548C-201ENST00000384815 97 ntBASIC-2.05□□□□□ -2.74
SHOX2O60902 RNU6-129P-201ENST00000391022 107 ntBASIC-2.05□□□□□ -2.74
SHOX2O60902 RNY4P18-201ENST00000391107 89 ntBASIC-2.05□□□□□ -2.74
SHOX2O60902 MIR1236-201ENST00000408340 102 ntBASIC-2.05□□□□□ -2.74
SHOX2O60902 RNU6-182P-201ENST00000516970 105 ntBASIC-2.05□□□□□ -2.74
SHOX2O60902 RNU6-176P-201ENST00000517196 105 ntBASIC-2.05□□□□□ -2.74
SHOX2O60902 AL157777.2-201ENST00000258070 137 ntBASIC-2.06□□□□□ -2.74
SHOX2O60902 SNORD77.2-201ENST00000391045 68 ntBASIC-2.06□□□□□ -2.74
SHOX2O60902 RNU6-394P-201ENST00000410735 107 ntBASIC-2.06□□□□□ -2.74
SHOX2O60902 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-2.06□□□□□ -2.74
SHOX2O60902 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.07□□□□□ -2.74
SHOX2O60902 MIR568-201ENST00000385036 95 ntBASIC-2.07□□□□□ -2.74
SHOX2O60902 Y_RNA.609-201ENST00000410669 89 ntBASIC-2.07□□□□□ -2.74
SHOX2O60902 RNU6-172P-201ENST00000411000 93 ntBASIC-2.07□□□□□ -2.74
SHOX2O60902 RNU6-982P-201ENST00000516216 102 ntBASIC-2.07□□□□□ -2.74
SHOX2O60902 RNU7-153P-201ENST00000516455 62 ntBASIC-2.07□□□□□ -2.74
SHOX2O60902 SNORD116-10-201ENST00000363791 102 ntBASIC-2.08□□□□□ -2.74
SHOX2O60902 MIR630-201ENST00000384957 97 ntBASIC-2.08□□□□□ -2.74
SHOX2O60902 MTCYBP9-201ENST00000431021 303 ntBASIC-2.08□□□□□ -2.74
SHOX2O60902 Y_RNA.649-201ENST00000459077 103 ntBASIC-2.08□□□□□ -2.74
SHOX2O60902 AC008737.2-201ENST00000599446 118 ntBASIC-2.08□□□□□ -2.74
SHOX2O60902 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-2.08□□□□□ -2.74
SHOX2O60902 RNU6-668P-201ENST00000364180 107 ntBASIC-2.09□□□□□ -2.74
SHOX2O60902 RNA5SP173-201ENST00000364857 136 ntBASIC-2.09□□□□□ -2.74
SHOX2O60902 RNU6-867P-201ENST00000364956 107 ntBASIC-2.09□□□□□ -2.74
SHOX2O60902 MIR1302-3-201ENST00000408128 138 ntBASIC-2.09□□□□□ -2.74
SHOX2O60902 AC074348.1-201ENST00000426503 132 ntBASIC-2.09□□□□□ -2.74
SHOX2O60902 RNU6-1161P-201ENST00000516176 102 ntBASIC-2.09□□□□□ -2.74
SHOX2O60902 RNU6-537P-201ENST00000517277 103 ntBASIC-2.09□□□□□ -2.74
SHOX2O60902 MIR3675-201ENST00000583661 73 ntBASIC-2.09□□□□□ -2.74
SHOX2O60902 RNU6-624P-201ENST00000363411 107 ntBASIC-2.1□□□□□ -2.75
SHOX2O60902 RNU6-590P-201ENST00000365039 107 ntBASIC-2.1□□□□□ -2.75
SHOX2O60902 MIR579-201ENST00000385221 98 ntBASIC-2.1□□□□□ -2.75
SHOX2O60902 Y_RNA.604-201ENST00000410574 102 ntBASIC-2.1□□□□□ -2.75
SHOX2O60902 SCARNA23-201ENST00000516060 130 ntBASIC-2.1□□□□□ -2.75
SHOX2O60902 RNU6-402P-201ENST00000410678 103 ntBASIC-2.11□□□□□ -2.75
SHOX2O60902 TMSB4XP3-201ENST00000445144 114 ntBASIC-2.11□□□□□ -2.75
SHOX2O60902 MIR606-201ENST00000384851 96 ntBASIC-2.12□□□□□ -2.75
SHOX2O60902 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-2.12□□□□□ -2.75
SHOX2O60902 RNU6-330P-201ENST00000363015 107 ntBASIC-2.13□□□□□ -2.75
SHOX2O60902 MTND4LP9-201ENST00000427694 174 ntBASIC-2.13□□□□□ -2.75
SHOX2O60902 RNU6-904P-201ENST00000516206 101 ntBASIC-2.13□□□□□ -2.75
SHOX2O60902 Y_RNA.96-201ENST00000363092 109 ntBASIC-2.14□□□□□ -2.75
SHOX2O60902 Y_RNA.320-201ENST00000365144 102 ntBASIC-2.14□□□□□ -2.75
SHOX2O60902 RNU6-574P-201ENST00000384265 107 ntBASIC-2.14□□□□□ -2.75
SHOX2O60902 RNU6-804P-201ENST00000384286 107 ntBASIC-2.14□□□□□ -2.75
SHOX2O60902 RNU6-604P-201ENST00000390917 100 ntBASIC-2.14□□□□□ -2.75
SHOX2O60902 RNU7-107P-201ENST00000459121 61 ntBASIC-2.14□□□□□ -2.75
SHOX2O60902 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.14□□□□□ -2.75
SHOX2O60902 RNU6-426P-201ENST00000516464 97 ntBASIC-2.14□□□□□ -2.75
SHOX2O60902 RNU6-557P-201ENST00000516842 110 ntBASIC-2.14□□□□□ -2.75
SHOX2O60902 RNU6-303P-201ENST00000517091 106 ntBASIC-2.14□□□□□ -2.75
SHOX2O60902 RNU6-554P-201ENST00000410466 106 ntBASIC-2.16□□□□□ -2.76
SHOX2O60902 MTND4LP1-201ENST00000446263 157 ntBASIC-2.16□□□□□ -2.76
SHOX2O60902 RNU6-300P-201ENST00000459080 104 ntBASIC-2.16□□□□□ -2.76
SHOX2O60902 SNORD33.1-201ENST00000516213 88 ntBASIC-2.16□□□□□ -2.76
SHOX2O60902 MIR3914-2-201ENST00000637339 95 ntBASIC-2.16□□□□□ -2.76
SHOX2O60902 MIR4426-201ENST00000640330 63 ntBASIC-2.16□□□□□ -2.76
SHOX2O60902 RNU6-854P-201ENST00000364036 107 ntBASIC-2.17□□□□□ -2.76
SHOX2O60902 RNU6-1124P-201ENST00000384169 107 ntBASIC-2.17□□□□□ -2.76
SHOX2O60902 RNU6-738P-201ENST00000384531 106 ntBASIC-2.18□□□□□ -2.76
SHOX2O60902 RNU7-61P-201ENST00000515897 61 ntBASIC-2.18□□□□□ -2.76
SHOX2O60902 SNORD45.1-201ENST00000363181 77 ntBASIC-2.19□□□□□ -2.76
SHOX2O60902 MTATP8P2-201ENST00000435212 202 ntBASIC-2.19□□□□□ -2.76
SHOX2O60902 AL451105.1-201ENST00000450005 189 ntBASIC-2.19□□□□□ -2.76
SHOX2O60902 RNU6-1108P-201ENST00000516308 104 ntBASIC-2.19□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 1569.2 ms