Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.59□□□□□ -2.5
DDX4Q9NQI0 SNORD74.6-201ENST00000364796 70 ntBASIC-0.59□□□□□ -2.5
DDX4Q9NQI0 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.59□□□□□ -2.5
DDX4Q9NQI0 MIR4464-201ENST00000580818 92 ntBASIC-0.59□□□□□ -2.5
DDX4Q9NQI0 AL353803.5-201ENST00000599815 141 ntBASIC-0.59□□□□□ -2.5
DDX4Q9NQI0 RNU6-330P-201ENST00000363015 107 ntBASIC-0.6□□□□□ -2.51
DDX4Q9NQI0 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.6□□□□□ -2.51
DDX4Q9NQI0 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.6□□□□□ -2.51
DDX4Q9NQI0 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.6□□□□□ -2.51
DDX4Q9NQI0 RNA5SP266-201ENST00000410273 108 ntBASIC-0.6□□□□□ -2.51
DDX4Q9NQI0 AP000533.3-201ENST00000447704 118 ntBASIC-0.6□□□□□ -2.51
DDX4Q9NQI0 RNU7-154P-201ENST00000516194 62 ntBASIC-0.6□□□□□ -2.51
DDX4Q9NQI0 RNU6-881P-201ENST00000516813 102 ntBASIC-0.6□□□□□ -2.51
DDX4Q9NQI0 MIR3681-201ENST00000580089 72 ntBASIC-0.6□□□□□ -2.51
DDX4Q9NQI0 MIR4666B-201ENST00000578142 81 ntBASIC-0.61□□□□□ -2.51
DDX4Q9NQI0 MIR4712-201ENST00000583750 82 ntBASIC-0.61□□□□□ -2.51
DDX4Q9NQI0 RNU6-645P-201ENST00000364649 106 ntBASIC-0.62□□□□□ -2.51
DDX4Q9NQI0 MIR124-2-201ENST00000385081 109 ntBASIC-0.62□□□□□ -2.51
DDX4Q9NQI0 MIR517B-201ENST00000385102 67 ntBASIC-0.62□□□□□ -2.51
DDX4Q9NQI0 AL021921.1-201ENST00000442774 93 ntBASIC-0.62□□□□□ -2.51
DDX4Q9NQI0 RNU6-656P-201ENST00000516785 107 ntBASIC-0.62□□□□□ -2.51
DDX4Q9NQI0 MIR4484-201ENST00000582855 83 ntBASIC-0.62□□□□□ -2.51
DDX4Q9NQI0 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.63□□□□□ -2.51
DDX4Q9NQI0 SCARNA17-201ENST00000516183 144 ntBASIC-0.63□□□□□ -2.51
DDX4Q9NQI0 MIR8053-201ENST00000613344 75 ntBASIC-0.63□□□□□ -2.51
DDX4Q9NQI0 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.63□□□□□ -2.51
DDX4Q9NQI0 MIR6888-201ENST00000621977 67 ntBASIC-0.63□□□□□ -2.51
DDX4Q9NQI0 SNORD45.1-201ENST00000363181 77 ntBASIC-0.64□□□□□ -2.51
DDX4Q9NQI0 RNU6-604P-201ENST00000390917 100 ntBASIC-0.64□□□□□ -2.51
DDX4Q9NQI0 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.64□□□□□ -2.51
DDX4Q9NQI0 SNORD18.2-201ENST00000459604 70 ntBASIC-0.64□□□□□ -2.51
DDX4Q9NQI0 AL445584.3-201ENST00000617173 78 ntBASIC-0.64□□□□□ -2.51
DDX4Q9NQI0 Y_RNA.43-201ENST00000362670 111 ntBASIC-0.65□□□□□ -2.51
DDX4Q9NQI0 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.65□□□□□ -2.51
DDX4Q9NQI0 RNY1P9-201ENST00000532431 109 ntBASIC-0.65□□□□□ -2.51
DDX4Q9NQI0 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.65□□□□□ -2.51
DDX4Q9NQI0 RNU6-1152P-201ENST00000384576 107 ntBASIC-0.66□□□□□ -2.52
DDX4Q9NQI0 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.66□□□□□ -2.52
DDX4Q9NQI0 RNU6-518P-201ENST00000516056 96 ntBASIC-0.66□□□□□ -2.52
DDX4Q9NQI0 AC062037.1-201ENST00000605302 128 ntBASIC-0.66□□□□□ -2.52
DDX4Q9NQI0 RNU6-1255P-201ENST00000363434 112 ntBASIC-0.67□□□□□ -2.52
DDX4Q9NQI0 MIR519A2-201ENST00000384990 87 ntBASIC-0.67□□□□□ -2.52
DDX4Q9NQI0 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.67□□□□□ -2.52
DDX4Q9NQI0 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.67□□□□□ -2.52
DDX4Q9NQI0 SNORD57-201ENST00000448188 72 ntBASIC-0.68□□□□□ -2.52
DDX4Q9NQI0 MTND4LP1-201ENST00000446263 157 ntBASIC-0.69□□□□□ -2.52
DDX4Q9NQI0 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.69□□□□□ -2.52
DDX4Q9NQI0 SNORD114-25-201ENST00000363742 72 ntBASIC-0.7□□□□□ -2.52
DDX4Q9NQI0 SNORD114-17-201ENST00000364699 75 ntBASIC-0.7□□□□□ -2.52
DDX4Q9NQI0 SNX3P1X-201ENST00000414887 175 ntBASIC-0.7□□□□□ -2.52
DDX4Q9NQI0 U2.7-201ENST00000619197 100 ntBASIC-0.7□□□□□ -2.52
DDX4Q9NQI0 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.71□□□□□ -2.52
DDX4Q9NQI0 SNORD73B-201ENST00000364394 72 ntBASIC-0.71□□□□□ -2.52
DDX4Q9NQI0 RNU6-431P-201ENST00000383874 107 ntBASIC-0.71□□□□□ -2.52
DDX4Q9NQI0 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.71□□□□□ -2.52
DDX4Q9NQI0 MIR3202-2-201ENST00000635980 79 ntBASIC-0.71□□□□□ -2.52
DDX4Q9NQI0 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.72□□□□□ -2.52
DDX4Q9NQI0 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.72□□□□□ -2.52
DDX4Q9NQI0 MIR147A-201ENST00000385079 72 ntBASIC-0.72□□□□□ -2.52
DDX4Q9NQI0 RNU6-924P-201ENST00000362926 108 ntBASIC-0.73□□□□□ -2.53
DDX4Q9NQI0 SNORD64-201ENST00000386683 67 ntBASIC-0.73□□□□□ -2.53
DDX4Q9NQI0 MIR196A1-201ENST00000388006 70 ntBASIC-0.73□□□□□ -2.53
DDX4Q9NQI0 SNORA26.2-201ENST00000390922 122 ntBASIC-0.73□□□□□ -2.53
DDX4Q9NQI0 SCARNA18B-201ENST00000458806 135 ntBASIC-0.73□□□□□ -2.53
DDX4Q9NQI0 MIR548AG1-201ENST00000579932 66 ntBASIC-0.73□□□□□ -2.53
DDX4Q9NQI0 SNORD115-22-201ENST00000364456 82 ntBASIC-0.74□□□□□ -2.53
DDX4Q9NQI0 MIR548C-201ENST00000384815 97 ntBASIC-0.74□□□□□ -2.53
DDX4Q9NQI0 RNU6-982P-201ENST00000516216 102 ntBASIC-0.74□□□□□ -2.53
DDX4Q9NQI0 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.74□□□□□ -2.53
DDX4Q9NQI0 RNU6-787P-201ENST00000384032 107 ntBASIC-0.75□□□□□ -2.53
DDX4Q9NQI0 AL500527.2-201ENST00000454105 95 ntBASIC-0.75□□□□□ -2.53
DDX4Q9NQI0 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.75□□□□□ -2.53
DDX4Q9NQI0 MIR6738-201ENST00000619620 64 ntBASIC-0.75□□□□□ -2.53
DDX4Q9NQI0 MIR1302-4-201ENST00000408701 150 ntBASIC-0.76□□□□□ -2.53
DDX4Q9NQI0 RNY4P29-201ENST00000410801 97 ntBASIC-0.76□□□□□ -2.53
DDX4Q9NQI0 RNU6-70P-201ENST00000516438 60 ntBASIC-0.76□□□□□ -2.53
DDX4Q9NQI0 MIR4324-201ENST00000584846 72 ntBASIC-0.76□□□□□ -2.53
DDX4Q9NQI0 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.76□□□□□ -2.53
DDX4Q9NQI0 SNORD113.1-201ENST00000363280 73 ntBASIC-0.77□□□□□ -2.53
DDX4Q9NQI0 MIR587-201ENST00000384845 96 ntBASIC-0.77□□□□□ -2.53
DDX4Q9NQI0 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.77□□□□□ -2.53
DDX4Q9NQI0 MIR382-201ENST00000637119 76 ntBASIC-0.77□□□□□ -2.53
DDX4Q9NQI0 RNU6-668P-201ENST00000364180 107 ntBASIC-0.78□□□□□ -2.53
DDX4Q9NQI0 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.78□□□□□ -2.53
DDX4Q9NQI0 MIR154-201ENST00000385243 84 ntBASIC-0.78□□□□□ -2.53
DDX4Q9NQI0 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.78□□□□□ -2.53
DDX4Q9NQI0 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.78□□□□□ -2.53
DDX4Q9NQI0 RNA5SP215-201ENST00000363440 122 ntBASIC-0.79□□□□□ -2.54
DDX4Q9NQI0 RNU6-10P-201ENST00000384036 107 ntBASIC-0.79□□□□□ -2.54
DDX4Q9NQI0 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.79□□□□□ -2.54
DDX4Q9NQI0 SNORD83B-201ENST00000386745 93 ntBASIC-0.79□□□□□ -2.54
DDX4Q9NQI0 SNORA26.4-201ENST00000391188 123 ntBASIC-0.79□□□□□ -2.54
DDX4Q9NQI0 SNORD63.1-201ENST00000516178 80 ntBASIC-0.79□□□□□ -2.54
DDX4Q9NQI0 RNU7-174P-201ENST00000516248 59 ntBASIC-0.79□□□□□ -2.54
DDX4Q9NQI0 RNU6-246P-201ENST00000384702 107 ntBASIC-0.8□□□□□ -2.54
DDX4Q9NQI0 RNU6-587P-201ENST00000391282 106 ntBASIC-0.8□□□□□ -2.54
DDX4Q9NQI0 MIR664A-201ENST00000626086 82 ntBASIC-0.8□□□□□ -2.54
DDX4Q9NQI0 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.81□□□□□ -2.54
DDX4Q9NQI0 SNORD115-33-201ENST00000363723 82 ntBASIC-0.81□□□□□ -2.54
DDX4Q9NQI0 RNU6-24P-201ENST00000384440 107 ntBASIC-0.81□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 285.2 ms