Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.73□□□□□ -2.53
CCDC144BQ3MJ40 MIR4484-201ENST00000582855 83 ntBASIC-0.73□□□□□ -2.53
CCDC144BQ3MJ40 MIR4712-201ENST00000583750 82 ntBASIC-0.73□□□□□ -2.53
CCDC144BQ3MJ40 AC062037.1-201ENST00000605302 128 ntBASIC-0.73□□□□□ -2.53
CCDC144BQ3MJ40 SNORD114-14-201ENST00000362723 75 ntBASIC-0.74□□□□□ -2.53
CCDC144BQ3MJ40 RNU6-1152P-201ENST00000384576 107 ntBASIC-0.74□□□□□ -2.53
CCDC144BQ3MJ40 MIR1255B2-201ENST00000408618 67 ntBASIC-0.74□□□□□ -2.53
CCDC144BQ3MJ40 SNORD45.1-201ENST00000363181 77 ntBASIC-0.75□□□□□ -2.53
CCDC144BQ3MJ40 MIR518B-201ENST00000385127 83 ntBASIC-0.75□□□□□ -2.53
CCDC144BQ3MJ40 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.75□□□□□ -2.53
CCDC144BQ3MJ40 AC021146.6-201ENST00000514659 117 ntBASIC-0.75□□□□□ -2.53
CCDC144BQ3MJ40 SNORD22.1-201ENST00000516331 125 ntBASIC-0.75□□□□□ -2.53
CCDC144BQ3MJ40 MIR3179-1-201ENST00000578940 84 ntBASIC-0.75□□□□□ -2.53
CCDC144BQ3MJ40 MIR3179-2-201ENST00000579107 84 ntBASIC-0.75□□□□□ -2.53
CCDC144BQ3MJ40 MIR3179-3-201ENST00000579566 84 ntBASIC-0.75□□□□□ -2.53
CCDC144BQ3MJ40 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.75□□□□□ -2.53
CCDC144BQ3MJ40 MIR3179-4-201ENST00000617599 84 ntBASIC-0.75□□□□□ -2.53
CCDC144BQ3MJ40 SNORD73B-201ENST00000364394 72 ntBASIC-0.76□□□□□ -2.53
CCDC144BQ3MJ40 RNU6-721P-201ENST00000410155 105 ntBASIC-0.77□□□□□ -2.53
CCDC144BQ3MJ40 MIR8053-201ENST00000613344 75 ntBASIC-0.77□□□□□ -2.53
CCDC144BQ3MJ40 RNU6-645P-201ENST00000364649 106 ntBASIC-0.78□□□□□ -2.53
CCDC144BQ3MJ40 RNU6-656P-201ENST00000516785 107 ntBASIC-0.78□□□□□ -2.53
CCDC144BQ3MJ40 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.79□□□□□ -2.54
CCDC144BQ3MJ40 AL353803.5-201ENST00000599815 141 ntBASIC-0.79□□□□□ -2.54
CCDC144BQ3MJ40 SNORD74.6-201ENST00000364796 70 ntBASIC-0.8□□□□□ -2.54
CCDC144BQ3MJ40 AL021921.1-201ENST00000442774 93 ntBASIC-0.8□□□□□ -2.54
CCDC144BQ3MJ40 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.81□□□□□ -2.54
CCDC144BQ3MJ40 RNU6-604P-201ENST00000390917 100 ntBASIC-0.81□□□□□ -2.54
CCDC144BQ3MJ40 SNORA26.2-201ENST00000390922 122 ntBASIC-0.81□□□□□ -2.54
CCDC144BQ3MJ40 AP000533.3-201ENST00000447704 118 ntBASIC-0.81□□□□□ -2.54
CCDC144BQ3MJ40 RNU7-154P-201ENST00000516194 62 ntBASIC-0.81□□□□□ -2.54
CCDC144BQ3MJ40 SNX3P1X-201ENST00000414887 175 ntBASIC-0.82□□□□□ -2.54
CCDC144BQ3MJ40 MIR124-2-201ENST00000385081 109 ntBASIC-0.83□□□□□ -2.54
CCDC144BQ3MJ40 MIR517B-201ENST00000385102 67 ntBASIC-0.83□□□□□ -2.54
CCDC144BQ3MJ40 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.83□□□□□ -2.54
CCDC144BQ3MJ40 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.83□□□□□ -2.54
CCDC144BQ3MJ40 MIR3202-2-201ENST00000635980 79 ntBASIC-0.83□□□□□ -2.54
CCDC144BQ3MJ40 RNU6-881P-201ENST00000516813 102 ntBASIC-0.84□□□□□ -2.54
CCDC144BQ3MJ40 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.84□□□□□ -2.54
CCDC144BQ3MJ40 MIR4464-201ENST00000580818 92 ntBASIC-0.84□□□□□ -2.54
CCDC144BQ3MJ40 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.85□□□□□ -2.55
CCDC144BQ3MJ40 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.85□□□□□ -2.55
CCDC144BQ3MJ40 MIR1468-201ENST00000410600 86 ntBASIC-0.85□□□□□ -2.55
CCDC144BQ3MJ40 SNORD18.2-201ENST00000459604 70 ntBASIC-0.85□□□□□ -2.55
CCDC144BQ3MJ40 MIR1302-4-201ENST00000408701 150 ntBASIC-0.86□□□□□ -2.55
CCDC144BQ3MJ40 RNY4P29-201ENST00000410801 97 ntBASIC-0.86□□□□□ -2.55
CCDC144BQ3MJ40 MTND4LP1-201ENST00000446263 157 ntBASIC-0.86□□□□□ -2.55
CCDC144BQ3MJ40 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.87□□□□□ -2.55
CCDC144BQ3MJ40 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.87□□□□□ -2.55
CCDC144BQ3MJ40 RNU6-518P-201ENST00000516056 96 ntBASIC-0.87□□□□□ -2.55
CCDC144BQ3MJ40 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.88□□□□□ -2.55
CCDC144BQ3MJ40 MIR6888-201ENST00000621977 67 ntBASIC-0.88□□□□□ -2.55
CCDC144BQ3MJ40 RNU6-787P-201ENST00000384032 107 ntBASIC-0.89□□□□□ -2.55
CCDC144BQ3MJ40 AL445584.3-201ENST00000617173 78 ntBASIC-0.89□□□□□ -2.55
CCDC144BQ3MJ40 MIR587-201ENST00000384845 96 ntBASIC-0.9□□□□□ -2.55
CCDC144BQ3MJ40 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.9□□□□□ -2.55
CCDC144BQ3MJ40 SCARNA18B-201ENST00000458806 135 ntBASIC-0.9□□□□□ -2.55
CCDC144BQ3MJ40 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.91□□□□□ -2.56
CCDC144BQ3MJ40 MIR548C-201ENST00000384815 97 ntBASIC-0.91□□□□□ -2.56
CCDC144BQ3MJ40 MIR519A2-201ENST00000384990 87 ntBASIC-0.91□□□□□ -2.56
CCDC144BQ3MJ40 U2.7-201ENST00000619197 100 ntBASIC-0.91□□□□□ -2.56
CCDC144BQ3MJ40 SNORD115-22-201ENST00000364456 82 ntBASIC-0.92□□□□□ -2.56
CCDC144BQ3MJ40 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.92□□□□□ -2.56
CCDC144BQ3MJ40 RNU6-70P-201ENST00000516438 60 ntBASIC-0.93□□□□□ -2.56
CCDC144BQ3MJ40 SNORD114-25-201ENST00000363742 72 ntBASIC-0.94□□□□□ -2.56
CCDC144BQ3MJ40 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.94□□□□□ -2.56
CCDC144BQ3MJ40 SNORD114-17-201ENST00000364699 75 ntBASIC-0.95□□□□□ -2.56
CCDC144BQ3MJ40 RNU6-982P-201ENST00000516216 102 ntBASIC-0.95□□□□□ -2.56
CCDC144BQ3MJ40 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.95□□□□□ -2.56
CCDC144BQ3MJ40 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.95□□□□□ -2.56
CCDC144BQ3MJ40 MIR6738-201ENST00000619620 64 ntBASIC-0.95□□□□□ -2.56
CCDC144BQ3MJ40 MIR4320-201ENST00000636981 65 ntBASIC-0.95□□□□□ -2.56
CCDC144BQ3MJ40 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.96□□□□□ -2.56
CCDC144BQ3MJ40 RNA5SP173-201ENST00000364857 136 ntBASIC-0.96□□□□□ -2.56
CCDC144BQ3MJ40 RNU6-10P-201ENST00000384036 107 ntBASIC-0.96□□□□□ -2.56
CCDC144BQ3MJ40 SNORD113.1-201ENST00000363280 73 ntBASIC-0.97□□□□□ -2.56
CCDC144BQ3MJ40 MIR154-201ENST00000385243 84 ntBASIC-0.97□□□□□ -2.56
CCDC144BQ3MJ40 RNU6-924P-201ENST00000362926 108 ntBASIC-0.98□□□□□ -2.57
CCDC144BQ3MJ40 RNU6-668P-201ENST00000364180 107 ntBASIC-0.98□□□□□ -2.57
CCDC144BQ3MJ40 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.98□□□□□ -2.57
CCDC144BQ3MJ40 MIR4324-201ENST00000584846 72 ntBASIC-0.98□□□□□ -2.57
CCDC144BQ3MJ40 U7.4-201ENST00000614961 63 ntBASIC-0.98□□□□□ -2.57
CCDC144BQ3MJ40 MIR664A-201ENST00000626086 82 ntBASIC-0.98□□□□□ -2.57
CCDC144BQ3MJ40 Y_RNA.388-201ENST00000383919 113 ntBASIC-0.99□□□□□ -2.57
CCDC144BQ3MJ40 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.99□□□□□ -2.57
CCDC144BQ3MJ40 MIR4723-201ENST00000585070 81 ntBASIC-0.99□□□□□ -2.57
CCDC144BQ3MJ40 RNU6-587P-201ENST00000391282 106 ntBASIC-1□□□□□ -2.57
CCDC144BQ3MJ40 SCARNA17-201ENST00000516183 144 ntBASIC-1□□□□□ -2.57
CCDC144BQ3MJ40 RNU6-573P-201ENST00000383938 106 ntBASIC-1.01□□□□□ -2.57
CCDC144BQ3MJ40 RNA5SP215-201ENST00000363440 122 ntBASIC-1.02□□□□□ -2.57
CCDC144BQ3MJ40 RNU6-431P-201ENST00000383874 107 ntBASIC-1.02□□□□□ -2.57
CCDC144BQ3MJ40 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.02□□□□□ -2.57
CCDC144BQ3MJ40 MIR601-201ENST00000385256 79 ntBASIC-1.02□□□□□ -2.57
CCDC144BQ3MJ40 MIR196A1-201ENST00000388006 70 ntBASIC-1.02□□□□□ -2.57
CCDC144BQ3MJ40 MIR548AG1-201ENST00000579932 66 ntBASIC-1.02□□□□□ -2.57
CCDC144BQ3MJ40 RNU6-895P-201ENST00000384125 103 ntBASIC-1.03□□□□□ -2.57
CCDC144BQ3MJ40 RNU6-411P-201ENST00000384451 107 ntBASIC-1.03□□□□□ -2.57
CCDC144BQ3MJ40 SNORD45A-201ENST00000384512 84 ntBASIC-1.03□□□□□ -2.57
CCDC144BQ3MJ40 SNORD64-201ENST00000386683 67 ntBASIC-1.03□□□□□ -2.57
CCDC144BQ3MJ40 RNU7-174P-201ENST00000516248 59 ntBASIC-1.04□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 172.7 ms