Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 SNORD18.1-201ENST00000363807 70 ntBASIC-1.35□□□□□ -2.63
RAB40BQ12829 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.35□□□□□ -2.63
RAB40BQ12829 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.35□□□□□ -2.63
RAB40BQ12829 RNU6-458P-201ENST00000384179 107 ntBASIC-1.35□□□□□ -2.63
RAB40BQ12829 MIR520D-201ENST00000385002 87 ntBASIC-1.35□□□□□ -2.63
RAB40BQ12829 MIR487B-201ENST00000385021 84 ntBASIC-1.35□□□□□ -2.63
RAB40BQ12829 MIR519C-201ENST00000385053 87 ntBASIC-1.35□□□□□ -2.63
RAB40BQ12829 RNU6-696P-201ENST00000390834 107 ntBASIC-1.35□□□□□ -2.63
RAB40BQ12829 RNU7-174P-201ENST00000516248 59 ntBASIC-1.35□□□□□ -2.63
RAB40BQ12829 U6.58-201ENST00000613107 107 ntBASIC-1.35□□□□□ -2.63
RAB40BQ12829 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.36□□□□□ -2.63
RAB40BQ12829 RNU6-630P-201ENST00000391258 106 ntBASIC-1.36□□□□□ -2.63
RAB40BQ12829 RNA5SP180-201ENST00000516181 101 ntBASIC-1.36□□□□□ -2.63
RAB40BQ12829 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.36□□□□□ -2.63
RAB40BQ12829 MIR3668-201ENST00000582138 75 ntBASIC-1.36□□□□□ -2.63
RAB40BQ12829 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.37□□□□□ -2.63
RAB40BQ12829 RNU6-645P-201ENST00000364649 106 ntBASIC-1.37□□□□□ -2.63
RAB40BQ12829 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.37□□□□□ -2.63
RAB40BQ12829 RNA5SP331-201ENST00000364986 107 ntBASIC-1.37□□□□□ -2.63
RAB40BQ12829 SNORD77.2-201ENST00000391045 68 ntBASIC-1.37□□□□□ -2.63
RAB40BQ12829 AL365222.1-201ENST00000614661 98 ntBASIC-1.37□□□□□ -2.63
RAB40BQ12829 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.37□□□□□ -2.63
RAB40BQ12829 RNU6-766P-201ENST00000362478 107 ntBASIC-1.38□□□□□ -2.63
RAB40BQ12829 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.38□□□□□ -2.63
RAB40BQ12829 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.38□□□□□ -2.63
RAB40BQ12829 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.38□□□□□ -2.63
RAB40BQ12829 RNU6-695P-201ENST00000391157 104 ntBASIC-1.38□□□□□ -2.63
RAB40BQ12829 RNU6-587P-201ENST00000391282 106 ntBASIC-1.38□□□□□ -2.63
RAB40BQ12829 MIR23C-201ENST00000579846 100 ntBASIC-1.38□□□□□ -2.63
RAB40BQ12829 MIR1246-201ENST00000636535 73 ntBASIC-1.38□□□□□ -2.63
RAB40BQ12829 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.39□□□□□ -2.63
RAB40BQ12829 RNU6-598P-201ENST00000364017 105 ntBASIC-1.39□□□□□ -2.63
RAB40BQ12829 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.39□□□□□ -2.63
RAB40BQ12829 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.39□□□□□ -2.63
RAB40BQ12829 RNU6-983P-201ENST00000516004 103 ntBASIC-1.39□□□□□ -2.63
RAB40BQ12829 MIR3671-201ENST00000580455 88 ntBASIC-1.39□□□□□ -2.63
RAB40BQ12829 SNORD115-37-201ENST00000363768 82 ntBASIC-1.4□□□□□ -2.63
RAB40BQ12829 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.4□□□□□ -2.63
RAB40BQ12829 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.4□□□□□ -2.63
RAB40BQ12829 AC108019.1-201ENST00000512540 175 ntBASIC-1.4□□□□□ -2.63
RAB40BQ12829 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.41□□□□□ -2.64
RAB40BQ12829 RNU6-81P-201ENST00000365608 104 ntBASIC-1.41□□□□□ -2.64
RAB40BQ12829 RNU6-589P-201ENST00000516485 107 ntBASIC-1.41□□□□□ -2.64
RAB40BQ12829 RNU6-228P-201ENST00000362700 106 ntBASIC-1.42□□□□□ -2.64
RAB40BQ12829 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.42□□□□□ -2.64
RAB40BQ12829 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.42□□□□□ -2.64
RAB40BQ12829 MTATP8P2-201ENST00000435212 202 ntBASIC-1.42□□□□□ -2.64
RAB40BQ12829 RNU6-158P-201ENST00000517104 100 ntBASIC-1.42□□□□□ -2.64
RAB40BQ12829 RNU6-834P-201ENST00000362367 110 ntBASIC-1.43□□□□□ -2.64
RAB40BQ12829 RNU6-563P-201ENST00000364872 108 ntBASIC-1.43□□□□□ -2.64
RAB40BQ12829 SNX3P1X-201ENST00000414887 175 ntBASIC-1.43□□□□□ -2.64
RAB40BQ12829 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.43□□□□□ -2.64
RAB40BQ12829 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.43□□□□□ -2.64
RAB40BQ12829 U4.4-201ENST00000620626 117 ntBASIC-1.43□□□□□ -2.64
RAB40BQ12829 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.44□□□□□ -2.64
RAB40BQ12829 RNU6-841P-201ENST00000383872 107 ntBASIC-1.44□□□□□ -2.64
RAB40BQ12829 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.44□□□□□ -2.64
RAB40BQ12829 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.44□□□□□ -2.64
RAB40BQ12829 AC120024.2-201ENST00000576526 175 ntBASIC-1.44□□□□□ -2.64
RAB40BQ12829 MIR4756-201ENST00000577874 78 ntBASIC-1.44□□□□□ -2.64
RAB40BQ12829 MIR3123-201ENST00000583417 75 ntBASIC-1.44□□□□□ -2.64
RAB40BQ12829 MIR2052-201ENST00000636055 55 ntBASIC-1.44□□□□□ -2.64
RAB40BQ12829 RNU6-624P-201ENST00000363411 107 ntBASIC-1.45□□□□□ -2.64
RAB40BQ12829 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.45□□□□□ -2.64
RAB40BQ12829 MIR3170-201ENST00000582699 77 ntBASIC-1.45□□□□□ -2.64
RAB40BQ12829 RNU6-633P-201ENST00000362612 103 ntBASIC-1.46□□□□□ -2.64
RAB40BQ12829 RNU6-698P-201ENST00000363523 107 ntBASIC-1.46□□□□□ -2.64
RAB40BQ12829 RNU6-34P-201ENST00000364874 107 ntBASIC-1.46□□□□□ -2.64
RAB40BQ12829 MIR4668-201ENST00000582284 70 ntBASIC-1.46□□□□□ -2.64
RAB40BQ12829 MIR548AM-201ENST00000584298 74 ntBASIC-1.46□□□□□ -2.64
RAB40BQ12829 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.46□□□□□ -2.64
RAB40BQ12829 U2.18-201ENST00000622185 84 ntBASIC-1.46□□□□□ -2.64
RAB40BQ12829 RNU6-330P-201ENST00000363015 107 ntBASIC-1.47□□□□□ -2.64
RAB40BQ12829 MIR548C-201ENST00000384815 97 ntBASIC-1.47□□□□□ -2.64
RAB40BQ12829 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.47□□□□□ -2.64
RAB40BQ12829 RNU6-258P-201ENST00000390884 101 ntBASIC-1.47□□□□□ -2.64
RAB40BQ12829 AL031737.1-201ENST00000450125 223 ntBASIC-1.47□□□□□ -2.64
RAB40BQ12829 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.47□□□□□ -2.64
RAB40BQ12829 MIR664B-201ENST00000626756 61 ntBASIC-1.47□□□□□ -2.64
RAB40BQ12829 MIR429-201ENST00000362106 83 ntBASIC-1.48□□□□□ -2.65
RAB40BQ12829 RNU6-982P-201ENST00000516216 102 ntBASIC-1.48□□□□□ -2.65
RAB40BQ12829 MIR548V-201ENST00000584165 80 ntBASIC-1.48□□□□□ -2.65
RAB40BQ12829 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.49□□□□□ -2.65
RAB40BQ12829 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.49□□□□□ -2.65
RAB40BQ12829 MIR3675-201ENST00000583661 73 ntBASIC-1.49□□□□□ -2.65
RAB40BQ12829 RNU6-22P-201ENST00000384355 107 ntBASIC-1.5□□□□□ -2.65
RAB40BQ12829 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.5□□□□□ -2.65
RAB40BQ12829 MIR548AA1-201ENST00000384971 97 ntBASIC-1.5□□□□□ -2.65
RAB40BQ12829 AC074348.1-201ENST00000426503 132 ntBASIC-1.5□□□□□ -2.65
RAB40BQ12829 AC093729.1-201ENST00000513074 128 ntBASIC-1.5□□□□□ -2.65
RAB40BQ12829 MIR450A1-201ENST00000362262 91 ntBASIC-1.52□□□□□ -2.65
RAB40BQ12829 SNORD116-16-201ENST00000384533 92 ntBASIC-1.52□□□□□ -2.65
RAB40BQ12829 SNORD113-2-201ENST00000391082 72 ntBASIC-1.52□□□□□ -2.65
RAB40BQ12829 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.52□□□□□ -2.65
RAB40BQ12829 RNU6-557P-201ENST00000516842 110 ntBASIC-1.52□□□□□ -2.65
RAB40BQ12829 RNU6-303P-201ENST00000517091 106 ntBASIC-1.52□□□□□ -2.65
RAB40BQ12829 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.52□□□□□ -2.65
RAB40BQ12829 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.52□□□□□ -2.65
RAB40BQ12829 SNORD116-22-201ENST00000384430 92 ntBASIC-1.53□□□□□ -2.65
RAB40BQ12829 RNU6-604P-201ENST00000390917 100 ntBASIC-1.53□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms