Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.92□□□□□ -2.56
VCPP55072 U7.5-201ENST00000517224 61 ntBASIC-0.92□□□□□ -2.56
VCPP55072 MIR2052-201ENST00000636055 55 ntBASIC-0.92□□□□□ -2.56
VCPP55072 AC132825.6-201ENST00000638861 357 ntBASIC-0.92□□□□□ -2.56
VCPP55072 MIR519C-201ENST00000385053 87 ntBASIC-0.93□□□□□ -2.56
VCPP55072 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.93□□□□□ -2.56
VCPP55072 AL031737.1-201ENST00000450125 223 ntBASIC-0.93□□□□□ -2.56
VCPP55072 RNU6-267P-201ENST00000516714 103 ntBASIC-0.93□□□□□ -2.56
VCPP55072 MIR3910-1-201ENST00000580936 111 ntBASIC-0.93□□□□□ -2.56
VCPP55072 RNU6-924P-201ENST00000362926 108 ntBASIC-0.94□□□□□ -2.56
VCPP55072 RNU6-732P-201ENST00000516033 103 ntBASIC-0.94□□□□□ -2.56
VCPP55072 snoU83B.1-201ENST00000517136 88 ntBASIC-0.94□□□□□ -2.56
VCPP55072 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.94□□□□□ -2.56
VCPP55072 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.94□□□□□ -2.56
VCPP55072 RNU6-624P-201ENST00000363411 107 ntBASIC-0.95□□□□□ -2.56
VCPP55072 MIR29B1-201ENST00000385015 81 ntBASIC-0.95□□□□□ -2.56
VCPP55072 MIR889-201ENST00000401280 79 ntBASIC-0.95□□□□□ -2.56
VCPP55072 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.96□□□□□ -2.56
VCPP55072 RNU6-219P-201ENST00000364728 107 ntBASIC-0.96□□□□□ -2.56
VCPP55072 RNU6-752P-201ENST00000516376 102 ntBASIC-0.96□□□□□ -2.56
VCPP55072 RNU6-633P-201ENST00000362612 103 ntBASIC-0.97□□□□□ -2.56
VCPP55072 RNU6-478P-201ENST00000363904 110 ntBASIC-0.97□□□□□ -2.56
VCPP55072 RNU6-645P-201ENST00000364649 106 ntBASIC-0.97□□□□□ -2.56
VCPP55072 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.97□□□□□ -2.56
VCPP55072 SNORD77.2-201ENST00000391045 68 ntBASIC-0.97□□□□□ -2.56
VCPP55072 RPL35AP4-201ENST00000412007 102 ntBASIC-0.97□□□□□ -2.56
VCPP55072 RNU6-982P-201ENST00000516216 102 ntBASIC-0.97□□□□□ -2.56
VCPP55072 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.97□□□□□ -2.56
VCPP55072 MIR4306-201ENST00000583390 91 ntBASIC-0.97□□□□□ -2.56
VCPP55072 MIR6874-201ENST00000635894 71 ntBASIC-0.97□□□□□ -2.56
VCPP55072 MIR450A1-201ENST00000362262 91 ntBASIC-0.98□□□□□ -2.57
VCPP55072 RNU6-681P-201ENST00000364012 104 ntBASIC-0.98□□□□□ -2.57
VCPP55072 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.98□□□□□ -2.57
VCPP55072 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.98□□□□□ -2.57
VCPP55072 AL021921.1-201ENST00000442774 93 ntBASIC-0.98□□□□□ -2.57
VCPP55072 RNU7-174P-201ENST00000516248 59 ntBASIC-0.98□□□□□ -2.57
VCPP55072 MIR4668-201ENST00000582284 70 ntBASIC-0.98□□□□□ -2.57
VCPP55072 AC091912.2-201ENST00000624798 167 ntBASIC-0.98□□□□□ -2.57
VCPP55072 SNORD115-37-201ENST00000363768 82 ntBASIC-1□□□□□ -2.57
VCPP55072 MIR488-201ENST00000365739 83 ntBASIC-1□□□□□ -2.57
VCPP55072 MIR520D-201ENST00000385002 87 ntBASIC-1□□□□□ -2.57
VCPP55072 MIR507-201ENST00000385234 94 ntBASIC-1□□□□□ -2.57
VCPP55072 RNY4P18-201ENST00000391107 89 ntBASIC-1□□□□□ -2.57
VCPP55072 AC090616.4-201ENST00000448026 115 ntBASIC-1□□□□□ -2.57
VCPP55072 U4.4-201ENST00000620626 117 ntBASIC-1□□□□□ -2.57
VCPP55072 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.01□□□□□ -2.57
VCPP55072 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.01□□□□□ -2.57
VCPP55072 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.01□□□□□ -2.57
VCPP55072 RNU6-402P-201ENST00000410678 103 ntBASIC-1.01□□□□□ -2.57
VCPP55072 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.01□□□□□ -2.57
VCPP55072 AL353691.2-201ENST00000443795 59 ntBASIC-1.01□□□□□ -2.57
VCPP55072 MIR5683-201ENST00000636514 76 ntBASIC-1.01□□□□□ -2.57
VCPP55072 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.02□□□□□ -2.57
VCPP55072 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.02□□□□□ -2.57
VCPP55072 SNORD113-1-201ENST00000365321 69 ntBASIC-1.02□□□□□ -2.57
VCPP55072 RNU6-587P-201ENST00000391282 106 ntBASIC-1.02□□□□□ -2.57
VCPP55072 AC074348.1-201ENST00000426503 132 ntBASIC-1.02□□□□□ -2.57
VCPP55072 SNORA40.13-201ENST00000516379 120 ntBASIC-1.02□□□□□ -2.57
VCPP55072 AP001318.4-201ENST00000616637 121 ntBASIC-1.02□□□□□ -2.57
VCPP55072 MIR6502-201ENST00000617296 76 ntBASIC-1.02□□□□□ -2.57
VCPP55072 RNU6-598P-201ENST00000364017 105 ntBASIC-1.03□□□□□ -2.57
VCPP55072 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.03□□□□□ -2.57
VCPP55072 RNU6-608P-201ENST00000383927 104 ntBASIC-1.03□□□□□ -2.57
VCPP55072 MIR527-201ENST00000385244 85 ntBASIC-1.03□□□□□ -2.57
VCPP55072 RNU6-604P-201ENST00000390917 100 ntBASIC-1.03□□□□□ -2.57
VCPP55072 MIR548BB-201ENST00000626714 66 ntBASIC-1.03□□□□□ -2.57
VCPP55072 RNU6-458P-201ENST00000384179 107 ntBASIC-1.04□□□□□ -2.58
VCPP55072 AC093729.1-201ENST00000513074 128 ntBASIC-1.04□□□□□ -2.58
VCPP55072 RNU6-807P-201ENST00000516805 107 ntBASIC-1.04□□□□□ -2.58
VCPP55072 U6.58-201ENST00000613107 107 ntBASIC-1.04□□□□□ -2.58
VCPP55072 MIR1246-201ENST00000636535 73 ntBASIC-1.04□□□□□ -2.58
VCPP55072 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.05□□□□□ -2.58
VCPP55072 RNU6-119P-201ENST00000364882 107 ntBASIC-1.05□□□□□ -2.58
VCPP55072 SNORD116-22-201ENST00000384430 92 ntBASIC-1.05□□□□□ -2.58
VCPP55072 MALAT1.1-201ENST00000618249 95 ntBASIC-1.05□□□□□ -2.58
VCPP55072 MIR664A-201ENST00000626086 82 ntBASIC-1.05□□□□□ -2.58
VCPP55072 RNU6-640P-201ENST00000363693 105 ntBASIC-1.06□□□□□ -2.58
VCPP55072 RNU6-164P-201ENST00000364604 103 ntBASIC-1.06□□□□□ -2.58
VCPP55072 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.06□□□□□ -2.58
VCPP55072 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.06□□□□□ -2.58
VCPP55072 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.07□□□□□ -2.58
VCPP55072 RNU6-755P-201ENST00000364400 103 ntBASIC-1.07□□□□□ -2.58
VCPP55072 SNORA8.1-201ENST00000384250 140 ntBASIC-1.07□□□□□ -2.58
VCPP55072 MIR548C-201ENST00000384815 97 ntBASIC-1.07□□□□□ -2.58
VCPP55072 RNU4-61P-201ENST00000411243 107 ntBASIC-1.07□□□□□ -2.58
VCPP55072 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.07□□□□□ -2.58
VCPP55072 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.07□□□□□ -2.58
VCPP55072 RNU6-557P-201ENST00000516842 110 ntBASIC-1.07□□□□□ -2.58
VCPP55072 MIR4484-201ENST00000582855 83 ntBASIC-1.07□□□□□ -2.58
VCPP55072 MIR3675-201ENST00000583661 73 ntBASIC-1.07□□□□□ -2.58
VCPP55072 U2.18-201ENST00000622185 84 ntBASIC-1.07□□□□□ -2.58
VCPP55072 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.08□□□□□ -2.58
VCPP55072 RNU6-258P-201ENST00000390884 101 ntBASIC-1.08□□□□□ -2.58
VCPP55072 RNU6-630P-201ENST00000391258 106 ntBASIC-1.08□□□□□ -2.58
VCPP55072 AL606753.1-201ENST00000427435 87 ntBASIC-1.08□□□□□ -2.58
VCPP55072 RNU6-303P-201ENST00000517091 106 ntBASIC-1.08□□□□□ -2.58
VCPP55072 SNORD45.1-201ENST00000363181 77 ntBASIC-1.09□□□□□ -2.58
VCPP55072 SNORA41B-201ENST00000384785 128 ntBASIC-1.1□□□□□ -2.59
VCPP55072 RNU6-168P-201ENST00000516189 101 ntBASIC-1.1□□□□□ -2.59
VCPP55072 AC006160.2-201ENST00000637708 154 ntBASIC-1.1□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 371.4 ms