Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 MIR548C-201ENST00000384815 97 ntBASIC-1.37□□□□□ -2.63
CSNK1A1P48729 MIR527-201ENST00000385244 85 ntBASIC-1.37□□□□□ -2.63
CSNK1A1P48729 MT-TR-201ENST00000387439 65 ntBASIC-1.37□□□□□ -2.63
CSNK1A1P48729 AL031737.1-201ENST00000450125 223 ntBASIC-1.37□□□□□ -2.63
CSNK1A1P48729 HAR1A.1-201ENST00000459583 118 ntBASIC-1.37□□□□□ -2.63
CSNK1A1P48729 RNA5SP476-201ENST00000516613 103 ntBASIC-1.37□□□□□ -2.63
CSNK1A1P48729 AC091912.2-201ENST00000624798 167 ntBASIC-1.37□□□□□ -2.63
CSNK1A1P48729 SNORD116-22-201ENST00000384430 92 ntBASIC-1.38□□□□□ -2.63
CSNK1A1P48729 RNU6-604P-201ENST00000390917 100 ntBASIC-1.38□□□□□ -2.63
CSNK1A1P48729 RNU6-402P-201ENST00000410678 103 ntBASIC-1.38□□□□□ -2.63
CSNK1A1P48729 MIR6874-201ENST00000635894 71 ntBASIC-1.38□□□□□ -2.63
CSNK1A1P48729 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.39□□□□□ -2.63
CSNK1A1P48729 RNU6-458P-201ENST00000384179 107 ntBASIC-1.39□□□□□ -2.63
CSNK1A1P48729 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.39□□□□□ -2.63
CSNK1A1P48729 RNU6-576P-201ENST00000390854 102 ntBASIC-1.39□□□□□ -2.63
CSNK1A1P48729 MIR3675-201ENST00000583661 73 ntBASIC-1.39□□□□□ -2.63
CSNK1A1P48729 U6.58-201ENST00000613107 107 ntBASIC-1.39□□□□□ -2.63
CSNK1A1P48729 AP001318.4-201ENST00000616637 121 ntBASIC-1.39□□□□□ -2.63
CSNK1A1P48729 MIR548BB-201ENST00000626714 66 ntBASIC-1.39□□□□□ -2.63
CSNK1A1P48729 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.4□□□□□ -2.63
CSNK1A1P48729 SNORA8.1-201ENST00000384250 140 ntBASIC-1.4□□□□□ -2.63
CSNK1A1P48729 RNA5SP266-201ENST00000410273 108 ntBASIC-1.4□□□□□ -2.63
CSNK1A1P48729 AC074348.1-201ENST00000426503 132 ntBASIC-1.4□□□□□ -2.63
CSNK1A1P48729 AC090616.4-201ENST00000448026 115 ntBASIC-1.4□□□□□ -2.63
CSNK1A1P48729 RNU6-557P-201ENST00000516842 110 ntBASIC-1.4□□□□□ -2.63
CSNK1A1P48729 MALAT1.1-201ENST00000618249 95 ntBASIC-1.4□□□□□ -2.63
CSNK1A1P48729 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.41□□□□□ -2.64
CSNK1A1P48729 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.41□□□□□ -2.64
CSNK1A1P48729 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.41□□□□□ -2.64
CSNK1A1P48729 RNU6-303P-201ENST00000517091 106 ntBASIC-1.41□□□□□ -2.64
CSNK1A1P48729 U4.4-201ENST00000620626 117 ntBASIC-1.41□□□□□ -2.64
CSNK1A1P48729 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.42□□□□□ -2.64
CSNK1A1P48729 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.42□□□□□ -2.64
CSNK1A1P48729 RNU6-164P-201ENST00000364604 103 ntBASIC-1.42□□□□□ -2.64
CSNK1A1P48729 MIR488-201ENST00000365739 83 ntBASIC-1.42□□□□□ -2.64
CSNK1A1P48729 RNY4P18-201ENST00000391107 89 ntBASIC-1.42□□□□□ -2.64
CSNK1A1P48729 RNU6-587P-201ENST00000391282 106 ntBASIC-1.42□□□□□ -2.64
CSNK1A1P48729 SNORA40.13-201ENST00000516379 120 ntBASIC-1.42□□□□□ -2.64
CSNK1A1P48729 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.42□□□□□ -2.64
CSNK1A1P48729 RNU6-706P-201ENST00000517229 104 ntBASIC-1.42□□□□□ -2.64
CSNK1A1P48729 AC138207.3-201ENST00000585289 166 ntBASIC-1.42□□□□□ -2.64
CSNK1A1P48729 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.43□□□□□ -2.64
CSNK1A1P48729 MIR548M-201ENST00000408260 86 ntBASIC-1.43□□□□□ -2.64
CSNK1A1P48729 MIR4490-201ENST00000582647 84 ntBASIC-1.43□□□□□ -2.64
CSNK1A1P48729 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.44□□□□□ -2.64
CSNK1A1P48729 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.44□□□□□ -2.64
CSNK1A1P48729 RNU6-686P-201ENST00000364839 107 ntBASIC-1.44□□□□□ -2.64
CSNK1A1P48729 MIR548Q-201ENST00000408404 100 ntBASIC-1.44□□□□□ -2.64
CSNK1A1P48729 RNU6-313P-201ENST00000516317 112 ntBASIC-1.44□□□□□ -2.64
CSNK1A1P48729 RNA5SP461-201ENST00000516451 104 ntBASIC-1.44□□□□□ -2.64
CSNK1A1P48729 SNORD45.1-201ENST00000363181 77 ntBASIC-1.45□□□□□ -2.64
CSNK1A1P48729 RNU6-598P-201ENST00000364017 105 ntBASIC-1.45□□□□□ -2.64
CSNK1A1P48729 MIR520D-201ENST00000385002 87 ntBASIC-1.45□□□□□ -2.64
CSNK1A1P48729 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.45□□□□□ -2.64
CSNK1A1P48729 MIR4484-201ENST00000582855 83 ntBASIC-1.45□□□□□ -2.64
CSNK1A1P48729 MIR6502-201ENST00000617296 76 ntBASIC-1.46□□□□□ -2.64
CSNK1A1P48729 RNU6-608P-201ENST00000383927 104 ntBASIC-1.47□□□□□ -2.64
CSNK1A1P48729 RNU6-696P-201ENST00000390834 107 ntBASIC-1.47□□□□□ -2.64
CSNK1A1P48729 RNU6-640P-201ENST00000363693 105 ntBASIC-1.48□□□□□ -2.65
CSNK1A1P48729 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.48□□□□□ -2.65
CSNK1A1P48729 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.48□□□□□ -2.65
CSNK1A1P48729 U2.18-201ENST00000622185 84 ntBASIC-1.48□□□□□ -2.65
CSNK1A1P48729 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.49□□□□□ -2.65
CSNK1A1P48729 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.49□□□□□ -2.65
CSNK1A1P48729 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.49□□□□□ -2.65
CSNK1A1P48729 RNU6-630P-201ENST00000391258 106 ntBASIC-1.49□□□□□ -2.65
CSNK1A1P48729 RNU6-168P-201ENST00000516189 101 ntBASIC-1.49□□□□□ -2.65
CSNK1A1P48729 RNU6-698P-201ENST00000363523 107 ntBASIC-1.5□□□□□ -2.65
CSNK1A1P48729 RNU6-755P-201ENST00000364400 103 ntBASIC-1.5□□□□□ -2.65
CSNK1A1P48729 RNU6-34P-201ENST00000364874 107 ntBASIC-1.5□□□□□ -2.65
CSNK1A1P48729 RNU6-675P-201ENST00000384236 104 ntBASIC-1.5□□□□□ -2.65
CSNK1A1P48729 RNU6-129P-201ENST00000391022 107 ntBASIC-1.5□□□□□ -2.65
CSNK1A1P48729 MIR4520-1-201ENST00000582609 70 ntBASIC-1.5□□□□□ -2.65
CSNK1A1P48729 MIR548V-201ENST00000584165 80 ntBASIC-1.5□□□□□ -2.65
CSNK1A1P48729 MIR664A-201ENST00000626086 82 ntBASIC-1.5□□□□□ -2.65
CSNK1A1P48729 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.5□□□□□ -2.65
CSNK1A1P48729 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.51□□□□□ -2.65
CSNK1A1P48729 MIR3910-1-201ENST00000580936 111 ntBASIC-1.51□□□□□ -2.65
CSNK1A1P48729 AC006160.2-201ENST00000637708 154 ntBASIC-1.51□□□□□ -2.65
CSNK1A1P48729 MIR630-201ENST00000384957 97 ntBASIC-1.52□□□□□ -2.65
CSNK1A1P48729 SNORD113-2-201ENST00000391082 72 ntBASIC-1.54□□□□□ -2.66
CSNK1A1P48729 RNA5SP180-201ENST00000516181 101 ntBASIC-1.54□□□□□ -2.66
CSNK1A1P48729 SNORA63.4-201ENST00000362763 126 ntBASIC-1.55□□□□□ -2.66
CSNK1A1P48729 SNORD45A-201ENST00000384512 84 ntBASIC-1.55□□□□□ -2.66
CSNK1A1P48729 MIR5591-201ENST00000578248 65 ntBASIC-1.55□□□□□ -2.66
CSNK1A1P48729 MIR1297-201ENST00000637311 77 ntBASIC-1.55□□□□□ -2.66
CSNK1A1P48729 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.56□□□□□ -2.66
CSNK1A1P48729 SNORD113.1-201ENST00000363280 73 ntBASIC-1.56□□□□□ -2.66
CSNK1A1P48729 SNORA41B-201ENST00000384785 128 ntBASIC-1.56□□□□□ -2.66
CSNK1A1P48729 SNX3P1X-201ENST00000414887 175 ntBASIC-1.56□□□□□ -2.66
CSNK1A1P48729 HLA-S-202ENST00000425174 53 ntBASIC-1.56□□□□□ -2.66
CSNK1A1P48729 RNU6-844P-201ENST00000517175 102 ntBASIC-1.56□□□□□ -2.66
CSNK1A1P48729 SNORD113-1-201ENST00000365321 69 ntBASIC-1.57□□□□□ -2.66
CSNK1A1P48729 RNU6-32P-201ENST00000383948 107 ntBASIC-1.57□□□□□ -2.66
CSNK1A1P48729 RNU6-13P-201ENST00000384248 107 ntBASIC-1.57□□□□□ -2.66
CSNK1A1P48729 RNU6-12P-201ENST00000384604 107 ntBASIC-1.57□□□□□ -2.66
CSNK1A1P48729 RNU6-41P-201ENST00000384741 107 ntBASIC-1.57□□□□□ -2.66
CSNK1A1P48729 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.57□□□□□ -2.66
CSNK1A1P48729 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.57□□□□□ -2.66
CSNK1A1P48729 MIR4770-201ENST00000579149 58 ntBASIC-1.57□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 182.5 ms