Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 RNU6-168P-201ENST00000516189 101 ntBASIC-1.16□□□□□ -2.6
COL4A2P08572 SNORD33.1-201ENST00000516213 88 ntBASIC-1.16□□□□□ -2.6
COL4A2P08572 RNU7-153P-201ENST00000516455 62 ntBASIC-1.16□□□□□ -2.6
COL4A2P08572 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.17□□□□□ -2.6
COL4A2P08572 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.18□□□□□ -2.6
COL4A2P08572 MIR519C-201ENST00000385053 87 ntBASIC-1.18□□□□□ -2.6
COL4A2P08572 MIR1302-5-201ENST00000408164 150 ntBASIC-1.18□□□□□ -2.6
COL4A2P08572 SNORD54-201ENST00000459159 67 ntBASIC-1.18□□□□□ -2.6
COL4A2P08572 RNU6-346P-201ENST00000516288 111 ntBASIC-1.18□□□□□ -2.6
COL4A2P08572 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.18□□□□□ -2.6
COL4A2P08572 RNU6-695P-201ENST00000391157 104 ntBASIC-1.18□□□□□ -2.6
COL4A2P08572 AL035461.1-201ENST00000421490 332 ntBASIC-1.18□□□□□ -2.6
COL4A2P08572 RNU7-88P-201ENST00000458752 63 ntBASIC-1.18□□□□□ -2.6
COL4A2P08572 RNU6-518P-201ENST00000516056 96 ntBASIC-1.18□□□□□ -2.6
COL4A2P08572 MIR3675-201ENST00000583661 73 ntBASIC-1.18□□□□□ -2.6
COL4A2P08572 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.19□□□□□ -2.6
COL4A2P08572 SNORD77.2-201ENST00000391045 68 ntBASIC-1.19□□□□□ -2.6
COL4A2P08572 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.19□□□□□ -2.6
COL4A2P08572 SNORD115-37-201ENST00000363768 82 ntBASIC-1.2□□□□□ -2.6
COL4A2P08572 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.2□□□□□ -2.6
COL4A2P08572 RPL35AP4-201ENST00000412007 102 ntBASIC-1.2□□□□□ -2.6
COL4A2P08572 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.2□□□□□ -2.6
COL4A2P08572 U2.7-201ENST00000619197 100 ntBASIC-1.2□□□□□ -2.6
COL4A2P08572 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.2□□□□□ -2.6
COL4A2P08572 RNU6-246P-201ENST00000384702 107 ntBASIC-1.2□□□□□ -2.6
COL4A2P08572 MIR590-201ENST00000385008 97 ntBASIC-1.2□□□□□ -2.6
COL4A2P08572 AC108019.1-201ENST00000512540 175 ntBASIC-1.2□□□□□ -2.6
COL4A2P08572 MIR5683-201ENST00000636514 76 ntBASIC-1.2□□□□□ -2.6
COL4A2P08572 RNU6-807P-201ENST00000516805 107 ntBASIC-1.21□□□□□ -2.6
COL4A2P08572 MIR4756-201ENST00000577874 78 ntBASIC-1.21□□□□□ -2.6
COL4A2P08572 U7.3-201ENST00000616123 62 ntBASIC-1.21□□□□□ -2.6
COL4A2P08572 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.22□□□□□ -2.6
COL4A2P08572 MIR487B-201ENST00000385021 84 ntBASIC-1.22□□□□□ -2.6
COL4A2P08572 MIR2052-201ENST00000636055 55 ntBASIC-1.22□□□□□ -2.6
COL4A2P08572 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.23□□□□□ -2.61
COL4A2P08572 RNU6-106P-201ENST00000384405 107 ntBASIC-1.23□□□□□ -2.61
COL4A2P08572 RNU6-162P-201ENST00000516228 103 ntBASIC-1.23□□□□□ -2.61
COL4A2P08572 MIR548Q-201ENST00000408404 100 ntBASIC-1.23□□□□□ -2.61
COL4A2P08572 RNU6-633P-201ENST00000362612 103 ntBASIC-1.24□□□□□ -2.61
COL4A2P08572 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.24□□□□□ -2.61
COL4A2P08572 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.24□□□□□ -2.61
COL4A2P08572 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.24□□□□□ -2.61
COL4A2P08572 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.25□□□□□ -2.61
COL4A2P08572 RNU6-794P-201ENST00000517261 64 ntBASIC-1.25□□□□□ -2.61
COL4A2P08572 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.25□□□□□ -2.61
COL4A2P08572 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.26□□□□□ -2.61
COL4A2P08572 RNU6-696P-201ENST00000390834 107 ntBASIC-1.26□□□□□ -2.61
COL4A2P08572 MIR23C-201ENST00000579846 100 ntBASIC-1.26□□□□□ -2.61
COL4A2P08572 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.26□□□□□ -2.61
COL4A2P08572 SNORD116-14-201ENST00000383894 92 ntBASIC-1.26□□□□□ -2.61
COL4A2P08572 SNORD116-17-201ENST00000383929 92 ntBASIC-1.26□□□□□ -2.61
COL4A2P08572 SNORD116-15-201ENST00000384445 92 ntBASIC-1.26□□□□□ -2.61
COL4A2P08572 RNU6-959P-201ENST00000384671 107 ntBASIC-1.26□□□□□ -2.61
COL4A2P08572 SNORD116-19-201ENST00000384729 92 ntBASIC-1.26□□□□□ -2.61
COL4A2P08572 RNU6-400P-201ENST00000391173 106 ntBASIC-1.26□□□□□ -2.61
COL4A2P08572 MTATP8P2-201ENST00000435212 202 ntBASIC-1.26□□□□□ -2.61
COL4A2P08572 RNU7-174P-201ENST00000516248 59 ntBASIC-1.26□□□□□ -2.61
COL4A2P08572 MIR548AG1-201ENST00000579932 66 ntBASIC-1.26□□□□□ -2.61
COL4A2P08572 MIR664B-201ENST00000626756 61 ntBASIC-1.26□□□□□ -2.61
COL4A2P08572 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-1.26□□□□□ -2.61
COL4A2P08572 MIR548AM-201ENST00000584298 74 ntBASIC-1.27□□□□□ -2.61
COL4A2P08572 SNORD116-22-201ENST00000384430 92 ntBASIC-1.28□□□□□ -2.61
COL4A2P08572 RNU4-88P-201ENST00000411220 86 ntBASIC-1.28□□□□□ -2.61
COL4A2P08572 RNU6-255P-201ENST00000516957 105 ntBASIC-1.28□□□□□ -2.61
COL4A2P08572 RNU6-645P-201ENST00000364649 106 ntBASIC-1.29□□□□□ -2.62
COL4A2P08572 RNU6-587P-201ENST00000391282 106 ntBASIC-1.29□□□□□ -2.62
COL4A2P08572 AC093729.1-201ENST00000513074 128 ntBASIC-1.29□□□□□ -2.62
COL4A2P08572 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.29□□□□□ -2.62
COL4A2P08572 RNU6-109P-201ENST00000516364 107 ntBASIC-1.29□□□□□ -2.62
COL4A2P08572 RNU6-184P-201ENST00000516514 107 ntBASIC-1.29□□□□□ -2.62
COL4A2P08572 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.29□□□□□ -2.62
COL4A2P08572 MIR1297-201ENST00000637311 77 ntBASIC-1.29□□□□□ -2.62
COL4A2P08572 RNA5SP215-201ENST00000363440 122 ntBASIC-1.29□□□□□ -2.62
COL4A2P08572 RNU6-698P-201ENST00000363523 107 ntBASIC-1.29□□□□□ -2.62
COL4A2P08572 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.29□□□□□ -2.62
COL4A2P08572 RNU6-34P-201ENST00000364874 107 ntBASIC-1.29□□□□□ -2.62
COL4A2P08572 RNU6-980P-201ENST00000516925 103 ntBASIC-1.29□□□□□ -2.62
COL4A2P08572 MIR429-201ENST00000362106 83 ntBASIC-1.3□□□□□ -2.62
COL4A2P08572 RNU6-303P-201ENST00000517091 106 ntBASIC-1.3□□□□□ -2.62
COL4A2P08572 AC120024.2-201ENST00000576526 175 ntBASIC-1.3□□□□□ -2.62
COL4A2P08572 RNU6-478P-201ENST00000363904 110 ntBASIC-1.31□□□□□ -2.62
COL4A2P08572 RNU6-841P-201ENST00000383872 107 ntBASIC-1.31□□□□□ -2.62
COL4A2P08572 RNU6-458P-201ENST00000384179 107 ntBASIC-1.31□□□□□ -2.62
COL4A2P08572 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.31□□□□□ -2.62
COL4A2P08572 MIR548C-201ENST00000384815 97 ntBASIC-1.31□□□□□ -2.62
COL4A2P08572 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.31□□□□□ -2.62
COL4A2P08572 RNU6-557P-201ENST00000516842 110 ntBASIC-1.31□□□□□ -2.62
COL4A2P08572 U6.58-201ENST00000613107 107 ntBASIC-1.31□□□□□ -2.62
COL4A2P08572 AC099654.10-201ENST00000640395 161 ntBASIC-1.31□□□□□ -2.62
COL4A2P08572 RNU6-194P-201ENST00000363862 105 ntBASIC-1.32□□□□□ -2.62
COL4A2P08572 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.32□□□□□ -2.62
COL4A2P08572 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.32□□□□□ -2.62
COL4A2P08572 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.32□□□□□ -2.62
COL4A2P08572 SNORA19-201ENST00000384737 128 ntBASIC-1.32□□□□□ -2.62
COL4A2P08572 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.32□□□□□ -2.62
COL4A2P08572 RNU6-554P-201ENST00000410466 106 ntBASIC-1.32□□□□□ -2.62
COL4A2P08572 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.32□□□□□ -2.62
COL4A2P08572 RNA5SP405-201ENST00000363059 114 ntBASIC-1.32□□□□□ -2.62
COL4A2P08572 AC074348.1-201ENST00000426503 132 ntBASIC-1.32□□□□□ -2.62
COL4A2P08572 MIR3139-201ENST00000579145 76 ntBASIC-1.32□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 318.3 ms