Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.58□□□□□ -2.66
UPK3AO75631 AC093729.1-201ENST00000513074 128 ntBASIC-1.58□□□□□ -2.66
UPK3AO75631 RNU6-246P-201ENST00000384702 107 ntBASIC-1.59□□□□□ -2.66
UPK3AO75631 RNU7-134P-201ENST00000458997 64 ntBASIC-1.59□□□□□ -2.66
UPK3AO75631 RNY4P27-201ENST00000363341 96 ntBASIC-1.6□□□□□ -2.67
UPK3AO75631 RNU6-226P-201ENST00000363778 107 ntBASIC-1.6□□□□□ -2.67
UPK3AO75631 RNU6-81P-201ENST00000365608 104 ntBASIC-1.6□□□□□ -2.67
UPK3AO75631 AL078595.1-201ENST00000404458 226 ntBASIC-1.6□□□□□ -2.67
UPK3AO75631 RNU2-51P-201ENST00000410708 197 ntBASIC-1.6□□□□□ -2.67
UPK3AO75631 MIR3668-201ENST00000582138 75 ntBASIC-1.6□□□□□ -2.67
UPK3AO75631 MIR4490-201ENST00000582647 84 ntBASIC-1.6□□□□□ -2.67
UPK3AO75631 AC138207.3-201ENST00000585289 166 ntBASIC-1.6□□□□□ -2.67
UPK3AO75631 RNU6-834P-201ENST00000362367 110 ntBASIC-1.61□□□□□ -2.67
UPK3AO75631 RNU6-624P-201ENST00000363411 107 ntBASIC-1.61□□□□□ -2.67
UPK3AO75631 MIR8485-201ENST00000401372 91 ntBASIC-1.61□□□□□ -2.67
UPK3AO75631 AL031737.1-201ENST00000450125 223 ntBASIC-1.61□□□□□ -2.67
UPK3AO75631 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.61□□□□□ -2.67
UPK3AO75631 MIR450A1-201ENST00000362262 91 ntBASIC-1.62□□□□□ -2.67
UPK3AO75631 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.62□□□□□ -2.67
UPK3AO75631 MIR5683-201ENST00000636514 76 ntBASIC-1.62□□□□□ -2.67
UPK3AO75631 RNA5SP26-201ENST00000362406 119 ntBASIC-1.63□□□□□ -2.67
UPK3AO75631 SNORD116-22-201ENST00000384430 92 ntBASIC-1.63□□□□□ -2.67
UPK3AO75631 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.63□□□□□ -2.67
UPK3AO75631 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.63□□□□□ -2.67
UPK3AO75631 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.63□□□□□ -2.67
UPK3AO75631 MIR3675-201ENST00000583661 73 ntBASIC-1.63□□□□□ -2.67
UPK3AO75631 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.64□□□□□ -2.67
UPK3AO75631 SNORD19-201ENST00000391191 68 ntBASIC-1.64□□□□□ -2.67
UPK3AO75631 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.64□□□□□ -2.67
UPK3AO75631 AP002795.1-201ENST00000534879 84 ntBASIC-1.64□□□□□ -2.67
UPK3AO75631 MIR5591-201ENST00000578248 65 ntBASIC-1.64□□□□□ -2.67
UPK3AO75631 RNU6-330P-201ENST00000363015 107 ntBASIC-1.65□□□□□ -2.67
UPK3AO75631 SNORA8.1-201ENST00000384250 140 ntBASIC-1.65□□□□□ -2.67
UPK3AO75631 MIR527-201ENST00000385244 85 ntBASIC-1.65□□□□□ -2.67
UPK3AO75631 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.65□□□□□ -2.67
UPK3AO75631 MIR548Q-201ENST00000408404 100 ntBASIC-1.65□□□□□ -2.67
UPK3AO75631 RNU6-303P-201ENST00000517091 106 ntBASIC-1.65□□□□□ -2.67
UPK3AO75631 RNU6-22P-201ENST00000384355 107 ntBASIC-1.66□□□□□ -2.68
UPK3AO75631 RNU6-402P-201ENST00000410678 103 ntBASIC-1.66□□□□□ -2.68
UPK3AO75631 MIR3671-201ENST00000580455 88 ntBASIC-1.66□□□□□ -2.68
UPK3AO75631 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.67□□□□□ -2.68
UPK3AO75631 RNU6-604P-201ENST00000390917 100 ntBASIC-1.67□□□□□ -2.68
UPK3AO75631 MALAT1.1-201ENST00000618249 95 ntBASIC-1.67□□□□□ -2.68
UPK3AO75631 RNU6-219P-201ENST00000364728 107 ntBASIC-1.68□□□□□ -2.68
UPK3AO75631 RNU6-458P-201ENST00000384179 107 ntBASIC-1.68□□□□□ -2.68
UPK3AO75631 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.68□□□□□ -2.68
UPK3AO75631 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.68□□□□□ -2.68
UPK3AO75631 SNORA40.13-201ENST00000516379 120 ntBASIC-1.68□□□□□ -2.68
UPK3AO75631 RNU6-267P-201ENST00000516714 103 ntBASIC-1.68□□□□□ -2.68
UPK3AO75631 RNU6-557P-201ENST00000516842 110 ntBASIC-1.68□□□□□ -2.68
UPK3AO75631 U6.58-201ENST00000613107 107 ntBASIC-1.68□□□□□ -2.68
UPK3AO75631 RNU6-686P-201ENST00000364839 107 ntBASIC-1.69□□□□□ -2.68
UPK3AO75631 RPL35AP4-201ENST00000412007 102 ntBASIC-1.69□□□□□ -2.68
UPK3AO75631 RNU7-174P-201ENST00000516248 59 ntBASIC-1.69□□□□□ -2.68
UPK3AO75631 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.69□□□□□ -2.68
UPK3AO75631 AP001318.4-201ENST00000616637 121 ntBASIC-1.69□□□□□ -2.68
UPK3AO75631 MIR548BB-201ENST00000626714 66 ntBASIC-1.69□□□□□ -2.68
UPK3AO75631 RNU6-478P-201ENST00000363904 110 ntBASIC-1.7□□□□□ -2.68
UPK3AO75631 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.7□□□□□ -2.68
UPK3AO75631 SNORD45.1-201ENST00000363181 77 ntBASIC-1.71□□□□□ -2.68
UPK3AO75631 RNU6-164P-201ENST00000364604 103 ntBASIC-1.71□□□□□ -2.68
UPK3AO75631 RNU6-982P-201ENST00000516216 102 ntBASIC-1.71□□□□□ -2.68
UPK3AO75631 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.72□□□□□ -2.68
UPK3AO75631 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.72□□□□□ -2.68
UPK3AO75631 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.72□□□□□ -2.68
UPK3AO75631 RNU6-313P-201ENST00000516317 112 ntBASIC-1.72□□□□□ -2.68
UPK3AO75631 MIR429-201ENST00000362106 83 ntBASIC-1.73□□□□□ -2.69
UPK3AO75631 RNU6-129P-201ENST00000391022 107 ntBASIC-1.73□□□□□ -2.69
UPK3AO75631 MIR548M-201ENST00000408260 86 ntBASIC-1.73□□□□□ -2.69
UPK3AO75631 AC074348.1-201ENST00000426503 132 ntBASIC-1.73□□□□□ -2.69
UPK3AO75631 RNU6-497P-201ENST00000365316 104 ntBASIC-1.74□□□□□ -2.69
UPK3AO75631 AC091912.2-201ENST00000624798 167 ntBASIC-1.74□□□□□ -2.69
UPK3AO75631 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.75□□□□□ -2.69
UPK3AO75631 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.75□□□□□ -2.69
UPK3AO75631 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.75□□□□□ -2.69
UPK3AO75631 RNU6-696P-201ENST00000390834 107 ntBASIC-1.75□□□□□ -2.69
UPK3AO75631 RNY4P18-201ENST00000391107 89 ntBASIC-1.75□□□□□ -2.69
UPK3AO75631 MIR889-201ENST00000401280 79 ntBASIC-1.75□□□□□ -2.69
UPK3AO75631 MIR4770-201ENST00000579149 58 ntBASIC-1.75□□□□□ -2.69
UPK3AO75631 MIR4520-1-201ENST00000582609 70 ntBASIC-1.75□□□□□ -2.69
UPK3AO75631 MT-TR-201ENST00000387439 65 ntBASIC-1.76□□□□□ -2.69
UPK3AO75631 MIR4484-201ENST00000582855 83 ntBASIC-1.76□□□□□ -2.69
UPK3AO75631 MIR6874-201ENST00000635894 71 ntBASIC-1.76□□□□□ -2.69
UPK3AO75631 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.77□□□□□ -2.69
UPK3AO75631 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.77□□□□□ -2.69
UPK3AO75631 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.77□□□□□ -2.69
UPK3AO75631 AC090616.4-201ENST00000448026 115 ntBASIC-1.77□□□□□ -2.69
UPK3AO75631 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.78□□□□□ -2.69
UPK3AO75631 RNU6-698P-201ENST00000363523 107 ntBASIC-1.78□□□□□ -2.69
UPK3AO75631 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.78□□□□□ -2.69
UPK3AO75631 RNU6-34P-201ENST00000364874 107 ntBASIC-1.78□□□□□ -2.69
UPK3AO75631 RNU6-587P-201ENST00000391282 106 ntBASIC-1.78□□□□□ -2.69
UPK3AO75631 MIR548V-201ENST00000584165 80 ntBASIC-1.78□□□□□ -2.69
UPK3AO75631 MTND4LP1-201ENST00000446263 157 ntBASIC-1.79□□□□□ -2.7
UPK3AO75631 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.79□□□□□ -2.7
UPK3AO75631 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.8□□□□□ -2.7
UPK3AO75631 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.8□□□□□ -2.7
UPK3AO75631 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.8□□□□□ -2.7
UPK3AO75631 RNU6-380P-201ENST00000410207 107 ntBASIC-1.8□□□□□ -2.7
UPK3AO75631 MIR1297-201ENST00000637311 77 ntBASIC-1.8□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 192.5 ms