Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 MIR507-201ENST00000385234 94 ntBASIC-1.81□□□□□ -2.7
CLDN3O15551 MIR527-201ENST00000385244 85 ntBASIC-1.81□□□□□ -2.7
CLDN3O15551 AC008267.6-201ENST00000441664 139 ntBASIC-1.81□□□□□ -2.7
CLDN3O15551 RNU7-88P-201ENST00000458752 63 ntBASIC-1.81□□□□□ -2.7
CLDN3O15551 RNU6-633P-201ENST00000362612 103 ntBASIC-1.82□□□□□ -2.7
CLDN3O15551 snosnR66.1-201ENST00000391095 99 ntBASIC-1.82□□□□□ -2.7
CLDN3O15551 RNU6-766P-201ENST00000362478 107 ntBASIC-1.83□□□□□ -2.7
CLDN3O15551 RNU6-645P-201ENST00000364649 106 ntBASIC-1.83□□□□□ -2.7
CLDN3O15551 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.83□□□□□ -2.7
CLDN3O15551 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.83□□□□□ -2.7
CLDN3O15551 SNORD18.1-201ENST00000363807 70 ntBASIC-1.84□□□□□ -2.7
CLDN3O15551 SNORD19-201ENST00000391191 68 ntBASIC-1.84□□□□□ -2.7
CLDN3O15551 RNU2-51P-201ENST00000410708 197 ntBASIC-1.84□□□□□ -2.7
CLDN3O15551 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.84□□□□□ -2.7
CLDN3O15551 MIR4490-201ENST00000582647 84 ntBASIC-1.84□□□□□ -2.7
CLDN3O15551 MIR4723-201ENST00000585070 81 ntBASIC-1.84□□□□□ -2.7
CLDN3O15551 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.84□□□□□ -2.7
CLDN3O15551 RNU6-624P-201ENST00000363411 107 ntBASIC-1.85□□□□□ -2.71
CLDN3O15551 MIR5683-201ENST00000636514 76 ntBASIC-1.85□□□□□ -2.71
CLDN3O15551 MIR1207-201ENST00000408249 87 ntBASIC-1.86□□□□□ -2.71
CLDN3O15551 AC093729.1-201ENST00000513074 128 ntBASIC-1.86□□□□□ -2.71
CLDN3O15551 AP002795.1-201ENST00000534879 84 ntBASIC-1.86□□□□□ -2.71
CLDN3O15551 MIR4668-201ENST00000582284 70 ntBASIC-1.86□□□□□ -2.71
CLDN3O15551 RNU6-774P-201ENST00000363238 107 ntBASIC-1.87□□□□□ -2.71
CLDN3O15551 MIR548C-201ENST00000384815 97 ntBASIC-1.87□□□□□ -2.71
CLDN3O15551 RNA5SP86-201ENST00000390869 98 ntBASIC-1.87□□□□□ -2.71
CLDN3O15551 MIR2052-201ENST00000636055 55 ntBASIC-1.87□□□□□ -2.71
CLDN3O15551 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.88□□□□□ -2.71
CLDN3O15551 RNU6-209P-201ENST00000384118 107 ntBASIC-1.88□□□□□ -2.71
CLDN3O15551 RNU6-589P-201ENST00000516485 107 ntBASIC-1.88□□□□□ -2.71
CLDN3O15551 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.88□□□□□ -2.71
CLDN3O15551 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.89□□□□□ -2.71
CLDN3O15551 RNU6-164P-201ENST00000364604 103 ntBASIC-1.89□□□□□ -2.71
CLDN3O15551 AL365222.1-201ENST00000614661 98 ntBASIC-1.89□□□□□ -2.71
CLDN3O15551 MIR548H1-201ENST00000408610 102 ntBASIC-1.9□□□□□ -2.71
CLDN3O15551 MIR3675-201ENST00000583661 73 ntBASIC-1.9□□□□□ -2.71
CLDN3O15551 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.91□□□□□ -2.72
CLDN3O15551 RNU6-834P-201ENST00000362367 110 ntBASIC-1.93□□□□□ -2.72
CLDN3O15551 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.93□□□□□ -2.72
CLDN3O15551 RNU6-119P-201ENST00000364882 107 ntBASIC-1.93□□□□□ -2.72
CLDN3O15551 RNU6-81P-201ENST00000365608 104 ntBASIC-1.93□□□□□ -2.72
CLDN3O15551 MIR548Q-201ENST00000408404 100 ntBASIC-1.93□□□□□ -2.72
CLDN3O15551 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.93□□□□□ -2.72
CLDN3O15551 RNU6-557P-201ENST00000516842 110 ntBASIC-1.93□□□□□ -2.72
CLDN3O15551 RNU6-303P-201ENST00000517091 106 ntBASIC-1.93□□□□□ -2.72
CLDN3O15551 RNU6-330P-201ENST00000363015 107 ntBASIC-1.94□□□□□ -2.72
CLDN3O15551 RNU6-478P-201ENST00000363904 110 ntBASIC-1.94□□□□□ -2.72
CLDN3O15551 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.94□□□□□ -2.72
CLDN3O15551 SNORD116-22-201ENST00000384430 92 ntBASIC-1.94□□□□□ -2.72
CLDN3O15551 RNU7-174P-201ENST00000516248 59 ntBASIC-1.94□□□□□ -2.72
CLDN3O15551 AC091912.2-201ENST00000624798 167 ntBASIC-1.94□□□□□ -2.72
CLDN3O15551 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.95□□□□□ -2.72
CLDN3O15551 RNU6-458P-201ENST00000384179 107 ntBASIC-1.95□□□□□ -2.72
CLDN3O15551 AL078595.1-201ENST00000404458 226 ntBASIC-1.95□□□□□ -2.72
CLDN3O15551 U6.58-201ENST00000613107 107 ntBASIC-1.95□□□□□ -2.72
CLDN3O15551 RPL35AP4-201ENST00000412007 102 ntBASIC-1.96□□□□□ -2.72
CLDN3O15551 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.96□□□□□ -2.72
CLDN3O15551 AL031737.1-201ENST00000450125 223 ntBASIC-1.97□□□□□ -2.72
CLDN3O15551 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.97□□□□□ -2.72
CLDN3O15551 RNU6-686P-201ENST00000364839 107 ntBASIC-1.98□□□□□ -2.73
CLDN3O15551 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.98□□□□□ -2.73
CLDN3O15551 AC090616.4-201ENST00000448026 115 ntBASIC-1.98□□□□□ -2.73
CLDN3O15551 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.98□□□□□ -2.73
CLDN3O15551 RNU6-219P-201ENST00000364728 107 ntBASIC-1.99□□□□□ -2.73
CLDN3O15551 SNORA8.1-201ENST00000384250 140 ntBASIC-1.99□□□□□ -2.73
CLDN3O15551 RNU6-696P-201ENST00000390834 107 ntBASIC-1.99□□□□□ -2.73
CLDN3O15551 AC074348.1-201ENST00000426503 132 ntBASIC-1.99□□□□□ -2.73
CLDN3O15551 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.99□□□□□ -2.73
CLDN3O15551 MIR6874-201ENST00000635894 71 ntBASIC-1.99□□□□□ -2.73
CLDN3O15551 RNU6-1168P-201ENST00000390831 104 ntBASIC-2□□□□□ -2.73
CLDN3O15551 RNU6-604P-201ENST00000390917 100 ntBASIC-2□□□□□ -2.73
CLDN3O15551 RNU6-982P-201ENST00000516216 102 ntBASIC-2□□□□□ -2.73
CLDN3O15551 MIR450A1-201ENST00000362262 91 ntBASIC-2.01□□□□□ -2.73
CLDN3O15551 RNU6-228P-201ENST00000362700 106 ntBASIC-2.01□□□□□ -2.73
CLDN3O15551 SNORD45.1-201ENST00000363181 77 ntBASIC-2.01□□□□□ -2.73
CLDN3O15551 Y_RNA.282-201ENST00000364793 102 ntBASIC-2.01□□□□□ -2.73
CLDN3O15551 RNU6-497P-201ENST00000365316 104 ntBASIC-2.01□□□□□ -2.73
CLDN3O15551 RNU6-587P-201ENST00000391282 106 ntBASIC-2.01□□□□□ -2.73
CLDN3O15551 RNU6-402P-201ENST00000410678 103 ntBASIC-2.01□□□□□ -2.73
CLDN3O15551 MIR548BB-201ENST00000626714 66 ntBASIC-2.01□□□□□ -2.73
CLDN3O15551 MIR429-201ENST00000362106 83 ntBASIC-2.02□□□□□ -2.73
CLDN3O15551 Y_RNA.325-201ENST00000365171 122 ntBASIC-2.02□□□□□ -2.73
CLDN3O15551 RNU6-267P-201ENST00000516714 103 ntBASIC-2.02□□□□□ -2.73
CLDN3O15551 AP001318.4-201ENST00000616637 121 ntBASIC-2.02□□□□□ -2.73
CLDN3O15551 RNU6-1262P-201ENST00000516217 96 ntBASIC-2.03□□□□□ -2.73
CLDN3O15551 SNORA40.13-201ENST00000516379 120 ntBASIC-2.03□□□□□ -2.73
CLDN3O15551 MALAT1.1-201ENST00000618249 95 ntBASIC-2.03□□□□□ -2.73
CLDN3O15551 MIR496-201ENST00000385226 102 ntBASIC-2.04□□□□□ -2.74
CLDN3O15551 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.04□□□□□ -2.74
CLDN3O15551 MIRLET7A1-201ENST00000362295 80 ntBASIC-2.05□□□□□ -2.74
CLDN3O15551 Y_RNA.109-201ENST00000363215 102 ntBASIC-2.05□□□□□ -2.74
CLDN3O15551 RNU6-698P-201ENST00000363523 107 ntBASIC-2.05□□□□□ -2.74
CLDN3O15551 RNU6-34P-201ENST00000364874 107 ntBASIC-2.05□□□□□ -2.74
CLDN3O15551 RNU6-22P-201ENST00000384355 107 ntBASIC-2.05□□□□□ -2.74
CLDN3O15551 TMSB4XP3-201ENST00000445144 114 ntBASIC-2.05□□□□□ -2.74
CLDN3O15551 RNU6-168P-201ENST00000516189 101 ntBASIC-2.05□□□□□ -2.74
CLDN3O15551 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.06□□□□□ -2.74
CLDN3O15551 RNU6-129P-201ENST00000391022 107 ntBASIC-2.06□□□□□ -2.74
CLDN3O15551 Y_RNA.603-201ENST00000410571 108 ntBASIC-2.06□□□□□ -2.74
CLDN3O15551 RNU6-1117P-201ENST00000384525 104 ntBASIC-2.07□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 199.4 ms