Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 MIR519C-201ENST00000385053 87 ntBASIC-0.86□□□□□ -2.55
CCDC188H7C350 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.86□□□□□ -2.55
CCDC188H7C350 AC108019.1-201ENST00000512540 175 ntBASIC-0.86□□□□□ -2.55
CCDC188H7C350 RNU6-313P-201ENST00000516317 112 ntBASIC-0.86□□□□□ -2.55
CCDC188H7C350 MIR3139-201ENST00000579145 76 ntBASIC-0.86□□□□□ -2.55
CCDC188H7C350 AC091912.2-201ENST00000624798 167 ntBASIC-0.86□□□□□ -2.55
CCDC188H7C350 Y_RNA.284-201ENST00000364806 102 ntBASIC-0.87□□□□□ -2.55
CCDC188H7C350 Y_RNA.421-201ENST00000384052 101 ntBASIC-0.87□□□□□ -2.55
CCDC188H7C350 Y_RNA.564-201ENST00000384708 106 ntBASIC-0.87□□□□□ -2.55
CCDC188H7C350 MIR1255B2-201ENST00000408618 67 ntBASIC-0.87□□□□□ -2.55
CCDC188H7C350 AL031737.1-201ENST00000450125 223 ntBASIC-0.87□□□□□ -2.55
CCDC188H7C350 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.87□□□□□ -2.55
CCDC188H7C350 CYP3A54P-201ENST00000566950 75 ntBASIC-0.88□□□□□ -2.55
CCDC188H7C350 MIR6818-201ENST00000621576 65 ntBASIC-0.88□□□□□ -2.55
CCDC188H7C350 MIR2052-201ENST00000636055 55 ntBASIC-0.88□□□□□ -2.55
CCDC188H7C350 MIR450A1-201ENST00000362262 91 ntBASIC-0.89□□□□□ -2.55
CCDC188H7C350 Y_RNA.223-201ENST00000364290 113 ntBASIC-0.89□□□□□ -2.55
CCDC188H7C350 MIR3910-1-201ENST00000580936 111 ntBASIC-0.89□□□□□ -2.55
CCDC188H7C350 RNU6-340P-201ENST00000364005 107 ntBASIC-0.9□□□□□ -2.55
CCDC188H7C350 MIR521-2-201ENST00000384818 87 ntBASIC-0.9□□□□□ -2.55
CCDC188H7C350 SNORD77.2-201ENST00000391045 68 ntBASIC-0.9□□□□□ -2.55
CCDC188H7C350 MIR4464-201ENST00000580818 92 ntBASIC-0.9□□□□□ -2.55
CCDC188H7C350 MIR664B-201ENST00000626756 61 ntBASIC-0.9□□□□□ -2.55
CCDC188H7C350 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.91□□□□□ -2.56
CCDC188H7C350 RNU6-681P-201ENST00000364012 104 ntBASIC-0.91□□□□□ -2.56
CCDC188H7C350 Y_RNA.204-201ENST00000364112 102 ntBASIC-0.91□□□□□ -2.56
CCDC188H7C350 MT-TM-201ENST00000387377 68 ntBASIC-0.91□□□□□ -2.56
CCDC188H7C350 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.91□□□□□ -2.56
CCDC188H7C350 SNORD54-201ENST00000459159 67 ntBASIC-0.91□□□□□ -2.56
CCDC188H7C350 RNU6-752P-201ENST00000516376 102 ntBASIC-0.91□□□□□ -2.56
CCDC188H7C350 SNORD115-37-201ENST00000363768 82 ntBASIC-0.92□□□□□ -2.56
CCDC188H7C350 RNY4P7-201ENST00000364600 96 ntBASIC-0.92□□□□□ -2.56
CCDC188H7C350 MIR29B1-201ENST00000385015 81 ntBASIC-0.92□□□□□ -2.56
CCDC188H7C350 MIR4668-201ENST00000582284 70 ntBASIC-0.92□□□□□ -2.56
CCDC188H7C350 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.92□□□□□ -2.56
CCDC188H7C350 MIR6888-201ENST00000621977 67 ntBASIC-0.92□□□□□ -2.56
CCDC188H7C350 RNA5SP26-201ENST00000362406 119 ntBASIC-0.93□□□□□ -2.56
CCDC188H7C350 RNU6-633P-201ENST00000362612 103 ntBASIC-0.93□□□□□ -2.56
CCDC188H7C350 RNU6-576P-201ENST00000390854 102 ntBASIC-0.93□□□□□ -2.56
CCDC188H7C350 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.93□□□□□ -2.56
CCDC188H7C350 RNY4P18-201ENST00000391107 89 ntBASIC-0.93□□□□□ -2.56
CCDC188H7C350 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.93□□□□□ -2.56
CCDC188H7C350 Y_RNA.53-201ENST00000362765 102 ntBASIC-0.94□□□□□ -2.56
CCDC188H7C350 Y_RNA.211-201ENST00000364164 101 ntBASIC-0.94□□□□□ -2.56
CCDC188H7C350 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.94□□□□□ -2.56
CCDC188H7C350 VTRNA2-1-201ENST00000602301 127 ntBASIC-0.94□□□□□ -2.56
CCDC188H7C350 MIR6739-201ENST00000622461 75 ntBASIC-0.94□□□□□ -2.56
CCDC188H7C350 RNA5SP405-201ENST00000363059 114 ntBASIC-0.95□□□□□ -2.56
CCDC188H7C350 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.95□□□□□ -2.56
CCDC188H7C350 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.95□□□□□ -2.56
CCDC188H7C350 Y_RNA.502-201ENST00000384478 113 ntBASIC-0.95□□□□□ -2.56
CCDC188H7C350 MIR507-201ENST00000385234 94 ntBASIC-0.95□□□□□ -2.56
CCDC188H7C350 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.95□□□□□ -2.56
CCDC188H7C350 SNORA40.13-201ENST00000516379 120 ntBASIC-0.95□□□□□ -2.56
CCDC188H7C350 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-0.95□□□□□ -2.56
CCDC188H7C350 AP001318.4-201ENST00000616637 121 ntBASIC-0.95□□□□□ -2.56
CCDC188H7C350 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.96□□□□□ -2.56
CCDC188H7C350 AL035461.1-201ENST00000421490 332 ntBASIC-0.96□□□□□ -2.56
CCDC188H7C350 AC093729.1-201ENST00000513074 128 ntBASIC-0.96□□□□□ -2.56
CCDC188H7C350 SNORD116-22-201ENST00000384430 92 ntBASIC-0.97□□□□□ -2.56
CCDC188H7C350 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.97□□□□□ -2.56
CCDC188H7C350 RNY4-201ENST00000516507 96 ntBASIC-0.97□□□□□ -2.56
CCDC188H7C350 MALAT1.1-201ENST00000618249 95 ntBASIC-0.97□□□□□ -2.56
CCDC188H7C350 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.97□□□□□ -2.56
CCDC188H7C350 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.98□□□□□ -2.57
CCDC188H7C350 RNU6-1191P-201ENST00000516799 107 ntBASIC-0.98□□□□□ -2.57
CCDC188H7C350 MIR519A2-201ENST00000384990 87 ntBASIC-0.99□□□□□ -2.57
CCDC188H7C350 RNU6-518P-201ENST00000516056 96 ntBASIC-0.99□□□□□ -2.57
CCDC188H7C350 RNU6-924P-201ENST00000362926 108 ntBASIC-1□□□□□ -2.57
CCDC188H7C350 SNORD115-33-201ENST00000363723 82 ntBASIC-1□□□□□ -2.57
CCDC188H7C350 RNU6-164P-201ENST00000364604 103 ntBASIC-1□□□□□ -2.57
CCDC188H7C350 RNU6-402P-201ENST00000410678 103 ntBASIC-1□□□□□ -2.57
CCDC188H7C350 RNU4-61P-201ENST00000411243 107 ntBASIC-1□□□□□ -2.57
CCDC188H7C350 AL606753.1-201ENST00000427435 87 ntBASIC-1□□□□□ -2.57
CCDC188H7C350 SNORD63.1-201ENST00000516178 80 ntBASIC-1□□□□□ -2.57
CCDC188H7C350 RNU6-624P-201ENST00000363411 107 ntBASIC-1.01□□□□□ -2.57
CCDC188H7C350 RNU7-154P-201ENST00000516194 62 ntBASIC-1.01□□□□□ -2.57
CCDC188H7C350 RNU6-267P-201ENST00000516714 103 ntBASIC-1.01□□□□□ -2.57
CCDC188H7C350 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.01□□□□□ -2.57
CCDC188H7C350 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.01□□□□□ -2.57
CCDC188H7C350 RNU6-194P-201ENST00000363862 105 ntBASIC-1.02□□□□□ -2.57
CCDC188H7C350 RNU6-219P-201ENST00000364728 107 ntBASIC-1.02□□□□□ -2.57
CCDC188H7C350 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.02□□□□□ -2.57
CCDC188H7C350 SNORD113-1-201ENST00000365321 69 ntBASIC-1.02□□□□□ -2.57
CCDC188H7C350 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.03□□□□□ -2.57
CCDC188H7C350 RNU6-755P-201ENST00000364400 103 ntBASIC-1.03□□□□□ -2.57
CCDC188H7C350 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.03□□□□□ -2.57
CCDC188H7C350 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.03□□□□□ -2.57
CCDC188H7C350 AL021921.1-201ENST00000442774 93 ntBASIC-1.03□□□□□ -2.57
CCDC188H7C350 RNU6-656P-201ENST00000516785 107 ntBASIC-1.03□□□□□ -2.57
CCDC188H7C350 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.03□□□□□ -2.57
CCDC188H7C350 MIR548BB-201ENST00000626714 66 ntBASIC-1.04□□□□□ -2.58
CCDC188H7C350 SNORA63.4-201ENST00000362763 126 ntBASIC-1.05□□□□□ -2.58
CCDC188H7C350 RNU4-88P-201ENST00000411220 86 ntBASIC-1.05□□□□□ -2.58
CCDC188H7C350 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.06□□□□□ -2.58
CCDC188H7C350 SNORD115-22-201ENST00000364456 82 ntBASIC-1.06□□□□□ -2.58
CCDC188H7C350 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.06□□□□□ -2.58
CCDC188H7C350 MIR488-201ENST00000365739 83 ntBASIC-1.06□□□□□ -2.58
CCDC188H7C350 RNU6-32P-201ENST00000383948 107 ntBASIC-1.06□□□□□ -2.58
CCDC188H7C350 RNU6-13P-201ENST00000384248 107 ntBASIC-1.06□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 165.7 ms