Protein–RNA interactions for Protein: Q9H9Y2

RPF1, Ribosome production factor 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1Q9H9Y2 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.92□□□□□ -2.56
RPF1Q9H9Y2 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.92□□□□□ -2.56
RPF1Q9H9Y2 SNORD77.2-201ENST00000391045 68 ntBASIC-0.92□□□□□ -2.56
RPF1Q9H9Y2 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.92□□□□□ -2.56
RPF1Q9H9Y2 AL353803.5-201ENST00000599815 141 ntBASIC-0.92□□□□□ -2.56
RPF1Q9H9Y2 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.92□□□□□ -2.56
RPF1Q9H9Y2 SNORD74.6-201ENST00000364796 70 ntBASIC-0.93□□□□□ -2.56
RPF1Q9H9Y2 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.93□□□□□ -2.56
RPF1Q9H9Y2 MIR1255B2-201ENST00000408618 67 ntBASIC-0.93□□□□□ -2.56
RPF1Q9H9Y2 AP000533.3-201ENST00000447704 118 ntBASIC-0.93□□□□□ -2.56
RPF1Q9H9Y2 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.93□□□□□ -2.56
RPF1Q9H9Y2 RNU6-752P-201ENST00000516376 102 ntBASIC-0.93□□□□□ -2.56
RPF1Q9H9Y2 RNU6-881P-201ENST00000516813 102 ntBASIC-0.93□□□□□ -2.56
RPF1Q9H9Y2 CYP3A54P-201ENST00000566950 75 ntBASIC-0.93□□□□□ -2.56
RPF1Q9H9Y2 MIR4464-201ENST00000580818 92 ntBASIC-0.93□□□□□ -2.56
RPF1Q9H9Y2 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.94□□□□□ -2.56
RPF1Q9H9Y2 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.94□□□□□ -2.56
RPF1Q9H9Y2 RNU6-219P-201ENST00000364728 107 ntBASIC-0.94□□□□□ -2.56
RPF1Q9H9Y2 SNORA62.4-201ENST00000365504 151 ntBASIC-0.94□□□□□ -2.56
RPF1Q9H9Y2 AC022137.1-201ENST00000483735 151 ntBASIC-0.94□□□□□ -2.56
RPF1Q9H9Y2 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.94□□□□□ -2.56
RPF1Q9H9Y2 RNU6-267P-201ENST00000516714 103 ntBASIC-0.94□□□□□ -2.56
RPF1Q9H9Y2 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.95□□□□□ -2.56
RPF1Q9H9Y2 SNORD115-37-201ENST00000363768 82 ntBASIC-0.95□□□□□ -2.56
RPF1Q9H9Y2 MIR488-201ENST00000365739 83 ntBASIC-0.95□□□□□ -2.56
RPF1Q9H9Y2 SNORD116-22-201ENST00000384430 92 ntBASIC-0.95□□□□□ -2.56
RPF1Q9H9Y2 SNORD20-201ENST00000384550 80 ntBASIC-0.95□□□□□ -2.56
RPF1Q9H9Y2 MIR521-2-201ENST00000384818 87 ntBASIC-0.95□□□□□ -2.56
RPF1Q9H9Y2 RNU6-640P-201ENST00000363693 105 ntBASIC-0.96□□□□□ -2.56
RPF1Q9H9Y2 RNU6-215P-201ENST00000365169 102 ntBASIC-0.96□□□□□ -2.56
RPF1Q9H9Y2 RNU6-497P-201ENST00000365316 104 ntBASIC-0.96□□□□□ -2.56
RPF1Q9H9Y2 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.96□□□□□ -2.56
RPF1Q9H9Y2 MIR587-201ENST00000384845 96 ntBASIC-0.96□□□□□ -2.56
RPF1Q9H9Y2 MIR124-2-201ENST00000385081 109 ntBASIC-0.96□□□□□ -2.56
RPF1Q9H9Y2 MIR517B-201ENST00000385102 67 ntBASIC-0.96□□□□□ -2.56
RPF1Q9H9Y2 RNU6-402P-201ENST00000410678 103 ntBASIC-0.96□□□□□ -2.56
RPF1Q9H9Y2 SNORD57-201ENST00000448188 72 ntBASIC-0.96□□□□□ -2.56
RPF1Q9H9Y2 AC093729.1-201ENST00000513074 128 ntBASIC-0.96□□□□□ -2.56
RPF1Q9H9Y2 RNY1P9-201ENST00000532431 109 ntBASIC-0.96□□□□□ -2.56
RPF1Q9H9Y2 MIR6739-201ENST00000622461 75 ntBASIC-0.96□□□□□ -2.56
RPF1Q9H9Y2 MIR409-201ENST00000362237 79 ntBASIC-0.97□□□□□ -2.56
RPF1Q9H9Y2 RNU6-624P-201ENST00000363411 107 ntBASIC-0.97□□□□□ -2.56
RPF1Q9H9Y2 RNU6-147P-201ENST00000383983 107 ntBASIC-0.97□□□□□ -2.56
RPF1Q9H9Y2 AL035461.1-201ENST00000421490 332 ntBASIC-0.97□□□□□ -2.56
RPF1Q9H9Y2 MIR6738-201ENST00000619620 64 ntBASIC-0.97□□□□□ -2.56
RPF1Q9H9Y2 RNU6-681P-201ENST00000364012 104 ntBASIC-0.98□□□□□ -2.57
RPF1Q9H9Y2 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.98□□□□□ -2.57
RPF1Q9H9Y2 RNA5SP470-201ENST00000516463 106 ntBASIC-0.98□□□□□ -2.57
RPF1Q9H9Y2 AC140658.3-201ENST00000567603 271 ntBASIC-0.98□□□□□ -2.57
RPF1Q9H9Y2 MIR6888-201ENST00000621977 67 ntBASIC-0.98□□□□□ -2.57
RPF1Q9H9Y2 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.99□□□□□ -2.57
RPF1Q9H9Y2 RNU6-32P-201ENST00000383948 107 ntBASIC-0.99□□□□□ -2.57
RPF1Q9H9Y2 RNU6-13P-201ENST00000384248 107 ntBASIC-0.99□□□□□ -2.57
RPF1Q9H9Y2 RNU6-1081P-201ENST00000384537 107 ntBASIC-0.99□□□□□ -2.57
RPF1Q9H9Y2 RNU6-12P-201ENST00000384604 107 ntBASIC-0.99□□□□□ -2.57
RPF1Q9H9Y2 RNU6-41P-201ENST00000384741 107 ntBASIC-0.99□□□□□ -2.57
RPF1Q9H9Y2 MIR196A1-201ENST00000388006 70 ntBASIC-0.99□□□□□ -2.57
RPF1Q9H9Y2 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.99□□□□□ -2.57
RPF1Q9H9Y2 SNORD18.2-201ENST00000459604 70 ntBASIC-0.99□□□□□ -2.57
RPF1Q9H9Y2 MIR4324-201ENST00000584846 72 ntBASIC-0.99□□□□□ -2.57
RPF1Q9H9Y2 SCARNA20.2-201ENST00000516052 116 ntBASIC-1□□□□□ -2.57
RPF1Q9H9Y2 RNU6-919P-201ENST00000516731 104 ntBASIC-1□□□□□ -2.57
RPF1Q9H9Y2 RNU6-789P-201ENST00000517105 102 ntBASIC-1□□□□□ -2.57
RPF1Q9H9Y2 AL445584.3-201ENST00000617173 78 ntBASIC-1□□□□□ -2.57
RPF1Q9H9Y2 MIR548BB-201ENST00000626714 66 ntBASIC-1□□□□□ -2.57
RPF1Q9H9Y2 RNU6-10P-201ENST00000384036 107 ntBASIC-1.01□□□□□ -2.57
RPF1Q9H9Y2 RNU6-406P-201ENST00000516470 107 ntBASIC-1.01□□□□□ -2.57
RPF1Q9H9Y2 RNA5SP266-201ENST00000410273 108 ntBASIC-1.02□□□□□ -2.57
RPF1Q9H9Y2 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.03□□□□□ -2.57
RPF1Q9H9Y2 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.03□□□□□ -2.57
RPF1Q9H9Y2 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.04□□□□□ -2.58
RPF1Q9H9Y2 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.04□□□□□ -2.58
RPF1Q9H9Y2 MIR519A2-201ENST00000384990 87 ntBASIC-1.05□□□□□ -2.58
RPF1Q9H9Y2 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.05□□□□□ -2.58
RPF1Q9H9Y2 RNU4-61P-201ENST00000411243 107 ntBASIC-1.05□□□□□ -2.58
RPF1Q9H9Y2 RNU6-656P-201ENST00000516785 107 ntBASIC-1.05□□□□□ -2.58
RPF1Q9H9Y2 MIR4320-201ENST00000636981 65 ntBASIC-1.05□□□□□ -2.58
RPF1Q9H9Y2 SNORD83B-201ENST00000386745 93 ntBASIC-1.06□□□□□ -2.58
RPF1Q9H9Y2 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.06□□□□□ -2.58
RPF1Q9H9Y2 RNU6-557P-201ENST00000516842 110 ntBASIC-1.06□□□□□ -2.58
RPF1Q9H9Y2 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.06□□□□□ -2.58
RPF1Q9H9Y2 RNU6-330P-201ENST00000363015 107 ntBASIC-1.07□□□□□ -2.58
RPF1Q9H9Y2 SNORD114-25-201ENST00000363742 72 ntBASIC-1.07□□□□□ -2.58
RPF1Q9H9Y2 RNU6-44P-201ENST00000384045 107 ntBASIC-1.07□□□□□ -2.58
RPF1Q9H9Y2 RNU6-675P-201ENST00000384236 104 ntBASIC-1.07□□□□□ -2.58
RPF1Q9H9Y2 RNU6-518P-201ENST00000516056 96 ntBASIC-1.07□□□□□ -2.58
RPF1Q9H9Y2 RNU7-154P-201ENST00000516194 62 ntBASIC-1.07□□□□□ -2.58
RPF1Q9H9Y2 RNU6-478P-201ENST00000363904 110 ntBASIC-1.08□□□□□ -2.58
RPF1Q9H9Y2 RNU6-844P-201ENST00000517175 102 ntBASIC-1.08□□□□□ -2.58
RPF1Q9H9Y2 SNORD114-17-201ENST00000364699 75 ntBASIC-1.09□□□□□ -2.58
RPF1Q9H9Y2 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.1□□□□□ -2.59
RPF1Q9H9Y2 RNU6-24P-201ENST00000384440 107 ntBASIC-1.1□□□□□ -2.59
RPF1Q9H9Y2 RNU6-303P-201ENST00000517091 106 ntBASIC-1.1□□□□□ -2.59
RPF1Q9H9Y2 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.11□□□□□ -2.59
RPF1Q9H9Y2 RNU6-686P-201ENST00000364839 107 ntBASIC-1.11□□□□□ -2.59
RPF1Q9H9Y2 RNU6-431P-201ENST00000383874 107 ntBASIC-1.11□□□□□ -2.59
RPF1Q9H9Y2 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.11□□□□□ -2.59
RPF1Q9H9Y2 RNU6-645P-201ENST00000364649 106 ntBASIC-1.12□□□□□ -2.59
RPF1Q9H9Y2 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.12□□□□□ -2.59
RPF1Q9H9Y2 AL021921.1-201ENST00000442774 93 ntBASIC-1.12□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 303.9 ms