Protein–RNA interactions for Protein: Q9H9J4

USP42, Ubiquitin carboxyl-terminal hydrolase 42, humanhuman

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP42Q9H9J4 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.44□□□□□ -2.64
USP42Q9H9J4 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.44□□□□□ -2.64
USP42Q9H9J4 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.44□□□□□ -2.64
USP42Q9H9J4 Y_RNA.604-201ENST00000410574 102 ntBASIC-1.44□□□□□ -2.64
USP42Q9H9J4 MTND4LP9-201ENST00000427694 174 ntBASIC-1.44□□□□□ -2.64
USP42Q9H9J4 AL021921.1-201ENST00000442774 93 ntBASIC-1.44□□□□□ -2.64
USP42Q9H9J4 RNU6-327P-201ENST00000516270 127 ntBASIC-1.44□□□□□ -2.64
USP42Q9H9J4 AC004792.1-201ENST00000614523 137 ntBASIC-1.44□□□□□ -2.64
USP42Q9H9J4 MIR5683-201ENST00000636514 76 ntBASIC-1.44□□□□□ -2.64
USP42Q9H9J4 RNY4P27-201ENST00000363341 96 ntBASIC-1.45□□□□□ -2.64
USP42Q9H9J4 SNORD115-27-201ENST00000364430 82 ntBASIC-1.45□□□□□ -2.64
USP42Q9H9J4 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.45□□□□□ -2.64
USP42Q9H9J4 SNORD58A-201ENST00000383875 65 ntBASIC-1.45□□□□□ -2.64
USP42Q9H9J4 MIR487B-201ENST00000385021 84 ntBASIC-1.45□□□□□ -2.64
USP42Q9H9J4 RNU6-400P-201ENST00000391173 106 ntBASIC-1.45□□□□□ -2.64
USP42Q9H9J4 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.45□□□□□ -2.64
USP42Q9H9J4 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.45□□□□□ -2.64
USP42Q9H9J4 U7.5-201ENST00000517224 61 ntBASIC-1.45□□□□□ -2.64
USP42Q9H9J4 MTND5P41-201ENST00000517498 206 ntBASIC-1.45□□□□□ -2.64
USP42Q9H9J4 Y_RNA.489-201ENST00000384410 101 ntBASIC-1.46□□□□□ -2.64
USP42Q9H9J4 RNU7-107P-201ENST00000459121 61 ntBASIC-1.46□□□□□ -2.64
USP42Q9H9J4 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.46□□□□□ -2.64
USP42Q9H9J4 MIR548AG1-201ENST00000579932 66 ntBASIC-1.46□□□□□ -2.64
USP42Q9H9J4 MIR4796-201ENST00000580742 81 ntBASIC-1.46□□□□□ -2.64
USP42Q9H9J4 RNU6-79P-201ENST00000362511 107 ntBASIC-1.47□□□□□ -2.65
USP42Q9H9J4 RPL35AP4-201ENST00000412007 102 ntBASIC-1.47□□□□□ -2.65
USP42Q9H9J4 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.48□□□□□ -2.65
USP42Q9H9J4 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.48□□□□□ -2.65
USP42Q9H9J4 RNU6-196P-201ENST00000384315 107 ntBASIC-1.48□□□□□ -2.65
USP42Q9H9J4 RNU6-246P-201ENST00000384702 107 ntBASIC-1.48□□□□□ -2.65
USP42Q9H9J4 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.48□□□□□ -2.65
USP42Q9H9J4 RNU6-752P-201ENST00000516376 102 ntBASIC-1.48□□□□□ -2.65
USP42Q9H9J4 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.48□□□□□ -2.65
USP42Q9H9J4 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.49□□□□□ -2.65
USP42Q9H9J4 RNU6-972P-201ENST00000391208 107 ntBASIC-1.49□□□□□ -2.65
USP42Q9H9J4 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.49□□□□□ -2.65
USP42Q9H9J4 RNU6-379P-201ENST00000363813 104 ntBASIC-1.5□□□□□ -2.65
USP42Q9H9J4 RNU6-887P-201ENST00000410660 100 ntBASIC-1.5□□□□□ -2.65
USP42Q9H9J4 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.51□□□□□ -2.65
USP42Q9H9J4 MIR548Q-201ENST00000408404 100 ntBASIC-1.51□□□□□ -2.65
USP42Q9H9J4 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-1.51□□□□□ -2.65
USP42Q9H9J4 AC018880.2-201ENST00000414265 201 ntBASIC-1.51□□□□□ -2.65
USP42Q9H9J4 AL450471.1-201ENST00000447509 127 ntBASIC-1.51□□□□□ -2.65
USP42Q9H9J4 MIR3914-2-201ENST00000637339 95 ntBASIC-1.51□□□□□ -2.65
USP42Q9H9J4 RNU6-228P-201ENST00000362700 106 ntBASIC-1.52□□□□□ -2.65
USP42Q9H9J4 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.52□□□□□ -2.65
USP42Q9H9J4 MIR1236-201ENST00000408340 102 ntBASIC-1.52□□□□□ -2.65
USP42Q9H9J4 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.52□□□□□ -2.65
USP42Q9H9J4 AC108019.1-201ENST00000512540 175 ntBASIC-1.52□□□□□ -2.65
USP42Q9H9J4 SNORD33.1-201ENST00000516213 88 ntBASIC-1.52□□□□□ -2.65
USP42Q9H9J4 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.52□□□□□ -2.65
USP42Q9H9J4 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.52□□□□□ -2.65
USP42Q9H9J4 RNU6-257P-201ENST00000410238 98 ntBASIC-1.53□□□□□ -2.65
USP42Q9H9J4 SCARNA23-201ENST00000516060 130 ntBASIC-1.53□□□□□ -2.65
USP42Q9H9J4 RNU6-656P-201ENST00000516785 107 ntBASIC-1.53□□□□□ -2.65
USP42Q9H9J4 RNU6-388P-201ENST00000517012 105 ntBASIC-1.53□□□□□ -2.65
USP42Q9H9J4 RNU6-389P-201ENST00000517048 105 ntBASIC-1.53□□□□□ -2.65
USP42Q9H9J4 U2.7-201ENST00000619197 100 ntBASIC-1.53□□□□□ -2.65
USP42Q9H9J4 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.54□□□□□ -2.66
USP42Q9H9J4 RNU6-340P-201ENST00000364005 107 ntBASIC-1.54□□□□□ -2.66
USP42Q9H9J4 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.54□□□□□ -2.66
USP42Q9H9J4 RNU6-880P-201ENST00000384526 107 ntBASIC-1.54□□□□□ -2.66
USP42Q9H9J4 RNU6-1045P-201ENST00000516321 107 ntBASIC-1.54□□□□□ -2.66
USP42Q9H9J4 SNORD116-10-201ENST00000363791 102 ntBASIC-1.55□□□□□ -2.66
USP42Q9H9J4 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.55□□□□□ -2.66
USP42Q9H9J4 SNORA40-201ENST00000388090 126 ntBASIC-1.55□□□□□ -2.66
USP42Q9H9J4 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.55□□□□□ -2.66
USP42Q9H9J4 RNU6-904P-201ENST00000516206 101 ntBASIC-1.55□□□□□ -2.66
USP42Q9H9J4 RNU7-153P-201ENST00000516455 62 ntBASIC-1.55□□□□□ -2.66
USP42Q9H9J4 MIR4756-201ENST00000577874 78 ntBASIC-1.55□□□□□ -2.66
USP42Q9H9J4 RNU6-681P-201ENST00000364012 104 ntBASIC-1.56□□□□□ -2.66
USP42Q9H9J4 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.56□□□□□ -2.66
USP42Q9H9J4 AL035461.1-201ENST00000421490 332 ntBASIC-1.56□□□□□ -2.66
USP42Q9H9J4 RNU6-807P-201ENST00000516805 107 ntBASIC-1.56□□□□□ -2.66
USP42Q9H9J4 MIR664B-201ENST00000626756 61 ntBASIC-1.56□□□□□ -2.66
USP42Q9H9J4 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.57□□□□□ -2.66
USP42Q9H9J4 MIR548C-201ENST00000384815 97 ntBASIC-1.57□□□□□ -2.66
USP42Q9H9J4 MIR548A3-201ENST00000385297 97 ntBASIC-1.57□□□□□ -2.66
USP42Q9H9J4 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.57□□□□□ -2.66
USP42Q9H9J4 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.57□□□□□ -2.66
USP42Q9H9J4 RNU6-537P-201ENST00000517277 103 ntBASIC-1.57□□□□□ -2.66
USP42Q9H9J4 RNU6-478P-201ENST00000363904 110 ntBASIC-1.58□□□□□ -2.66
USP42Q9H9J4 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.58□□□□□ -2.66
USP42Q9H9J4 RNU6-463P-201ENST00000384340 107 ntBASIC-1.58□□□□□ -2.66
USP42Q9H9J4 RNU6-695P-201ENST00000391157 104 ntBASIC-1.58□□□□□ -2.66
USP42Q9H9J4 RNU6-971P-201ENST00000516920 106 ntBASIC-1.58□□□□□ -2.66
USP42Q9H9J4 RNU6-608P-201ENST00000383927 104 ntBASIC-1.59□□□□□ -2.66
USP42Q9H9J4 SCARNA15.1-201ENST00000516384 125 ntBASIC-1.59□□□□□ -2.66
USP42Q9H9J4 AL353621.2-201ENST00000605340 133 ntBASIC-1.59□□□□□ -2.66
USP42Q9H9J4 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.6□□□□□ -2.67
USP42Q9H9J4 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.6□□□□□ -2.67
USP42Q9H9J4 RNU6-645P-201ENST00000364649 106 ntBASIC-1.61□□□□□ -2.67
USP42Q9H9J4 RNU6-458P-201ENST00000384179 107 ntBASIC-1.61□□□□□ -2.67
USP42Q9H9J4 RNU6-886P-201ENST00000384319 105 ntBASIC-1.61□□□□□ -2.67
USP42Q9H9J4 RNU7-61P-201ENST00000515897 61 ntBASIC-1.61□□□□□ -2.67
USP42Q9H9J4 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.61□□□□□ -2.67
USP42Q9H9J4 U6.58-201ENST00000613107 107 ntBASIC-1.61□□□□□ -2.67
USP42Q9H9J4 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.62□□□□□ -2.67
USP42Q9H9J4 RNU6-119P-201ENST00000364882 107 ntBASIC-1.62□□□□□ -2.67
USP42Q9H9J4 RNU6-841P-201ENST00000383872 107 ntBASIC-1.62□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms