Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 RNY4P18-201ENST00000391107 89 ntBASIC-0.69□□□□□ -2.52
FOXC2Q99958 RNU6-274P-201ENST00000459566 107 ntBASIC-0.69□□□□□ -2.52
FOXC2Q99958 RNA5SP470-201ENST00000516463 106 ntBASIC-0.69□□□□□ -2.52
FOXC2Q99958 RNA5SP147-201ENST00000516493 109 ntBASIC-0.69□□□□□ -2.52
FOXC2Q99958 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.69□□□□□ -2.52
FOXC2Q99958 AL353803.5-201ENST00000599815 141 ntBASIC-0.69□□□□□ -2.52
FOXC2Q99958 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.69□□□□□ -2.52
FOXC2Q99958 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.69□□□□□ -2.52
FOXC2Q99958 MIR6739-201ENST00000622461 75 ntBASIC-0.69□□□□□ -2.52
FOXC2Q99958 AC132825.6-201ENST00000638861 357 ntBASIC-0.69□□□□□ -2.52
FOXC2Q99958 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.69□□□□□ -2.52
FOXC2Q99958 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.7□□□□□ -2.52
FOXC2Q99958 MIR519C-201ENST00000385053 87 ntBASIC-0.7□□□□□ -2.52
FOXC2Q99958 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.7□□□□□ -2.52
FOXC2Q99958 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.7□□□□□ -2.52
FOXC2Q99958 AP000533.3-201ENST00000447704 118 ntBASIC-0.7□□□□□ -2.52
FOXC2Q99958 AC022137.1-201ENST00000483735 151 ntBASIC-0.7□□□□□ -2.52
FOXC2Q99958 RNU6-313P-201ENST00000516317 112 ntBASIC-0.7□□□□□ -2.52
FOXC2Q99958 CYP3A54P-201ENST00000566950 75 ntBASIC-0.7□□□□□ -2.52
FOXC2Q99958 MIR6888-201ENST00000621977 67 ntBASIC-0.7□□□□□ -2.52
FOXC2Q99958 MIR2052-201ENST00000636055 55 ntBASIC-0.7□□□□□ -2.52
FOXC2Q99958 RNU6-624P-201ENST00000363411 107 ntBASIC-0.71□□□□□ -2.52
FOXC2Q99958 RNU6-755P-201ENST00000364400 103 ntBASIC-0.71□□□□□ -2.52
FOXC2Q99958 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.71□□□□□ -2.52
FOXC2Q99958 AL450471.1-201ENST00000447509 127 ntBASIC-0.71□□□□□ -2.52
FOXC2Q99958 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.71□□□□□ -2.52
FOXC2Q99958 AP001318.4-201ENST00000616637 121 ntBASIC-0.71□□□□□ -2.52
FOXC2Q99958 AL445584.3-201ENST00000617173 78 ntBASIC-0.71□□□□□ -2.52
FOXC2Q99958 MIR517B-201ENST00000385102 67 ntBASIC-0.72□□□□□ -2.52
FOXC2Q99958 MIR1255B2-201ENST00000408618 67 ntBASIC-0.72□□□□□ -2.52
FOXC2Q99958 AL031737.1-201ENST00000450125 223 ntBASIC-0.72□□□□□ -2.52
FOXC2Q99958 SNORD77.2-201ENST00000391045 68 ntBASIC-0.73□□□□□ -2.53
FOXC2Q99958 RNU2-51P-201ENST00000410708 197 ntBASIC-0.73□□□□□ -2.53
FOXC2Q99958 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.73□□□□□ -2.53
FOXC2Q99958 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.73□□□□□ -2.53
FOXC2Q99958 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.73□□□□□ -2.53
FOXC2Q99958 MIR4668-201ENST00000582284 70 ntBASIC-0.73□□□□□ -2.53
FOXC2Q99958 MIR4320-201ENST00000636981 65 ntBASIC-0.73□□□□□ -2.53
FOXC2Q99958 MIR147A-201ENST00000385079 72 ntBASIC-0.74□□□□□ -2.53
FOXC2Q99958 MIR124-2-201ENST00000385081 109 ntBASIC-0.74□□□□□ -2.53
FOXC2Q99958 MIR450A1-201ENST00000362262 91 ntBASIC-0.75□□□□□ -2.53
FOXC2Q99958 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.75□□□□□ -2.53
FOXC2Q99958 RNU6-219P-201ENST00000364728 107 ntBASIC-0.75□□□□□ -2.53
FOXC2Q99958 RNU6-431P-201ENST00000383874 107 ntBASIC-0.75□□□□□ -2.53
FOXC2Q99958 AC140658.3-201ENST00000567603 271 ntBASIC-0.75□□□□□ -2.53
FOXC2Q99958 RNU6-681P-201ENST00000364012 104 ntBASIC-0.76□□□□□ -2.53
FOXC2Q99958 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.76□□□□□ -2.53
FOXC2Q99958 AL035461.1-201ENST00000421490 332 ntBASIC-0.76□□□□□ -2.53
FOXC2Q99958 SNORD18.2-201ENST00000459604 70 ntBASIC-0.76□□□□□ -2.53
FOXC2Q99958 AC093729.1-201ENST00000513074 128 ntBASIC-0.76□□□□□ -2.53
FOXC2Q99958 RNU7-154P-201ENST00000516194 62 ntBASIC-0.76□□□□□ -2.53
FOXC2Q99958 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.76□□□□□ -2.53
FOXC2Q99958 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.77□□□□□ -2.53
FOXC2Q99958 MIR519A2-201ENST00000384990 87 ntBASIC-0.77□□□□□ -2.53
FOXC2Q99958 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.77□□□□□ -2.53
FOXC2Q99958 SNORA40.13-201ENST00000516379 120 ntBASIC-0.77□□□□□ -2.53
FOXC2Q99958 RNU6-656P-201ENST00000516785 107 ntBASIC-0.77□□□□□ -2.53
FOXC2Q99958 RNU6-557P-201ENST00000516842 110 ntBASIC-0.77□□□□□ -2.53
FOXC2Q99958 MALAT1.1-201ENST00000618249 95 ntBASIC-0.77□□□□□ -2.53
FOXC2Q99958 U4.2-201ENST00000618561 85 ntBASIC-0.77□□□□□ -2.53
FOXC2Q99958 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.78□□□□□ -2.53
FOXC2Q99958 RNU6-10P-201ENST00000384036 107 ntBASIC-0.79□□□□□ -2.54
FOXC2Q99958 SNORD116-22-201ENST00000384430 92 ntBASIC-0.79□□□□□ -2.54
FOXC2Q99958 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.79□□□□□ -2.54
FOXC2Q99958 MIR1207-201ENST00000408249 87 ntBASIC-0.79□□□□□ -2.54
FOXC2Q99958 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.79□□□□□ -2.54
FOXC2Q99958 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.79□□□□□ -2.54
FOXC2Q99958 SNORD114-25-201ENST00000363742 72 ntBASIC-0.8□□□□□ -2.54
FOXC2Q99958 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.8□□□□□ -2.54
FOXC2Q99958 MIR488-201ENST00000365739 83 ntBASIC-0.8□□□□□ -2.54
FOXC2Q99958 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.8□□□□□ -2.54
FOXC2Q99958 SNORD64-201ENST00000386683 67 ntBASIC-0.8□□□□□ -2.54
FOXC2Q99958 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.8□□□□□ -2.54
FOXC2Q99958 RNU6-267P-201ENST00000516714 103 ntBASIC-0.8□□□□□ -2.54
FOXC2Q99958 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.8□□□□□ -2.54
FOXC2Q99958 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.8□□□□□ -2.54
FOXC2Q99958 MIR6738-201ENST00000619620 64 ntBASIC-0.8□□□□□ -2.54
FOXC2Q99958 RNU6-640P-201ENST00000363693 105 ntBASIC-0.81□□□□□ -2.54
FOXC2Q99958 SNORD115-37-201ENST00000363768 82 ntBASIC-0.81□□□□□ -2.54
FOXC2Q99958 SNORD114-17-201ENST00000364699 75 ntBASIC-0.81□□□□□ -2.54
FOXC2Q99958 RNU6-215P-201ENST00000365169 102 ntBASIC-0.81□□□□□ -2.54
FOXC2Q99958 RNU6-402P-201ENST00000410678 103 ntBASIC-0.81□□□□□ -2.54
FOXC2Q99958 AL500527.2-201ENST00000454105 95 ntBASIC-0.81□□□□□ -2.54
FOXC2Q99958 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.81□□□□□ -2.54
FOXC2Q99958 MIR548BB-201ENST00000626714 66 ntBASIC-0.81□□□□□ -2.54
FOXC2Q99958 RNU6-924P-201ENST00000362926 108 ntBASIC-0.82□□□□□ -2.54
FOXC2Q99958 AC074348.1-201ENST00000426503 132 ntBASIC-0.82□□□□□ -2.54
FOXC2Q99958 AL606753.1-201ENST00000427435 87 ntBASIC-0.82□□□□□ -2.54
FOXC2Q99958 AL021921.1-201ENST00000442774 93 ntBASIC-0.82□□□□□ -2.54
FOXC2Q99958 MIR382-201ENST00000637119 76 ntBASIC-0.82□□□□□ -2.54
FOXC2Q99958 RNU6-675P-201ENST00000384236 104 ntBASIC-0.83□□□□□ -2.54
FOXC2Q99958 MIR196A1-201ENST00000388006 70 ntBASIC-0.83□□□□□ -2.54
FOXC2Q99958 AL603908.1-201ENST00000406098 201 ntBASIC-0.83□□□□□ -2.54
FOXC2Q99958 RNU6-518P-201ENST00000516056 96 ntBASIC-0.83□□□□□ -2.54
FOXC2Q99958 MIR378F-201ENST00000578143 78 ntBASIC-0.83□□□□□ -2.54
FOXC2Q99958 U2.7-201ENST00000619197 100 ntBASIC-0.83□□□□□ -2.54
FOXC2Q99958 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.84□□□□□ -2.54
FOXC2Q99958 RNU6-147P-201ENST00000383983 107 ntBASIC-0.84□□□□□ -2.54
FOXC2Q99958 RNU6-303P-201ENST00000517091 106 ntBASIC-0.84□□□□□ -2.54
FOXC2Q99958 MIR548AG1-201ENST00000579932 66 ntBASIC-0.84□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 215.6 ms