Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 SNORD115-37-201ENST00000363768 82 ntBASIC-1.07□□□□□ -2.58
CCDC197Q8NCU1 RNU6-35P-201ENST00000384530 107 ntBASIC-1.07□□□□□ -2.58
CCDC197Q8NCU1 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.07□□□□□ -2.58
CCDC197Q8NCU1 MIR6888-201ENST00000621977 67 ntBASIC-1.07□□□□□ -2.58
CCDC197Q8NCU1 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.08□□□□□ -2.58
CCDC197Q8NCU1 SNORA40.13-201ENST00000516379 120 ntBASIC-1.08□□□□□ -2.58
CCDC197Q8NCU1 MALAT1.1-201ENST00000618249 95 ntBASIC-1.08□□□□□ -2.58
CCDC197Q8NCU1 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.09□□□□□ -2.58
CCDC197Q8NCU1 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.09□□□□□ -2.58
CCDC197Q8NCU1 AL035461.1-201ENST00000421490 332 ntBASIC-1.09□□□□□ -2.58
CCDC197Q8NCU1 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.09□□□□□ -2.58
CCDC197Q8NCU1 SNORD95.1-201ENST00000364099 68 ntBASIC-1.1□□□□□ -2.59
CCDC197Q8NCU1 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.1□□□□□ -2.59
CCDC197Q8NCU1 RNU7-154P-201ENST00000516194 62 ntBASIC-1.1□□□□□ -2.59
CCDC197Q8NCU1 RNU6-624P-201ENST00000363411 107 ntBASIC-1.11□□□□□ -2.59
CCDC197Q8NCU1 RNU6-219P-201ENST00000364728 107 ntBASIC-1.11□□□□□ -2.59
CCDC197Q8NCU1 RNU6-497P-201ENST00000365316 104 ntBASIC-1.11□□□□□ -2.59
CCDC197Q8NCU1 SNORD116-22-201ENST00000384430 92 ntBASIC-1.11□□□□□ -2.59
CCDC197Q8NCU1 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.11□□□□□ -2.59
CCDC197Q8NCU1 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.11□□□□□ -2.59
CCDC197Q8NCU1 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.12□□□□□ -2.59
CCDC197Q8NCU1 AC093729.1-201ENST00000513074 128 ntBASIC-1.12□□□□□ -2.59
CCDC197Q8NCU1 AL603908.1-201ENST00000406098 201 ntBASIC-1.13□□□□□ -2.59
CCDC197Q8NCU1 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.13□□□□□ -2.59
CCDC197Q8NCU1 AC140658.3-201ENST00000567603 271 ntBASIC-1.13□□□□□ -2.59
CCDC197Q8NCU1 SNORD114-25-201ENST00000363742 72 ntBASIC-1.14□□□□□ -2.59
CCDC197Q8NCU1 MIR147A-201ENST00000385079 72 ntBASIC-1.15□□□□□ -2.59
CCDC197Q8NCU1 RNU6-402P-201ENST00000410678 103 ntBASIC-1.15□□□□□ -2.59
CCDC197Q8NCU1 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.15□□□□□ -2.59
CCDC197Q8NCU1 RNA5SP25-201ENST00000410815 110 ntBASIC-1.15□□□□□ -2.59
CCDC197Q8NCU1 SNORD114-17-201ENST00000364699 75 ntBASIC-1.16□□□□□ -2.6
CCDC197Q8NCU1 MIR519A2-201ENST00000384990 87 ntBASIC-1.16□□□□□ -2.6
CCDC197Q8NCU1 AL606753.1-201ENST00000427435 87 ntBASIC-1.16□□□□□ -2.6
CCDC197Q8NCU1 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.16□□□□□ -2.6
CCDC197Q8NCU1 RNU6-267P-201ENST00000516714 103 ntBASIC-1.16□□□□□ -2.6
CCDC197Q8NCU1 RNU6-640P-201ENST00000363693 105 ntBASIC-1.17□□□□□ -2.6
CCDC197Q8NCU1 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.17□□□□□ -2.6
CCDC197Q8NCU1 RNU6-431P-201ENST00000383874 107 ntBASIC-1.17□□□□□ -2.6
CCDC197Q8NCU1 RNU6-32P-201ENST00000383948 107 ntBASIC-1.17□□□□□ -2.6
CCDC197Q8NCU1 RNU6-13P-201ENST00000384248 107 ntBASIC-1.17□□□□□ -2.6
CCDC197Q8NCU1 RNU6-12P-201ENST00000384604 107 ntBASIC-1.17□□□□□ -2.6
CCDC197Q8NCU1 RNU6-41P-201ENST00000384741 107 ntBASIC-1.17□□□□□ -2.6
CCDC197Q8NCU1 RNU6-518P-201ENST00000516056 96 ntBASIC-1.17□□□□□ -2.6
CCDC197Q8NCU1 RNU6-656P-201ENST00000516785 107 ntBASIC-1.17□□□□□ -2.6
CCDC197Q8NCU1 RNU6-557P-201ENST00000516842 110 ntBASIC-1.17□□□□□ -2.6
CCDC197Q8NCU1 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.17□□□□□ -2.6
CCDC197Q8NCU1 MIR548BB-201ENST00000626714 66 ntBASIC-1.17□□□□□ -2.6
CCDC197Q8NCU1 RNU6-924P-201ENST00000362926 108 ntBASIC-1.18□□□□□ -2.6
CCDC197Q8NCU1 MIR488-201ENST00000365739 83 ntBASIC-1.18□□□□□ -2.6
CCDC197Q8NCU1 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.18□□□□□ -2.6
CCDC197Q8NCU1 RNU6-215P-201ENST00000365169 102 ntBASIC-1.19□□□□□ -2.6
CCDC197Q8NCU1 SNORD64-201ENST00000386683 67 ntBASIC-1.19□□□□□ -2.6
CCDC197Q8NCU1 MIR196A1-201ENST00000388006 70 ntBASIC-1.19□□□□□ -2.6
CCDC197Q8NCU1 AL021921.1-201ENST00000442774 93 ntBASIC-1.19□□□□□ -2.6
CCDC197Q8NCU1 SNORA63.4-201ENST00000362763 126 ntBASIC-1.2□□□□□ -2.6
CCDC197Q8NCU1 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.2□□□□□ -2.6
CCDC197Q8NCU1 RNU6-147P-201ENST00000383983 107 ntBASIC-1.2□□□□□ -2.6
CCDC197Q8NCU1 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.2□□□□□ -2.6
CCDC197Q8NCU1 SNORD114-15-201ENST00000364687 72 ntBASIC-1.21□□□□□ -2.6
CCDC197Q8NCU1 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.21□□□□□ -2.6
CCDC197Q8NCU1 RNU6-303P-201ENST00000517091 106 ntBASIC-1.21□□□□□ -2.6
CCDC197Q8NCU1 RNY1P7-201ENST00000384743 110 ntBASIC-1.22□□□□□ -2.6
CCDC197Q8NCU1 RNU6-919P-201ENST00000516731 104 ntBASIC-1.22□□□□□ -2.6
CCDC197Q8NCU1 RNU6-675P-201ENST00000384236 104 ntBASIC-1.23□□□□□ -2.61
CCDC197Q8NCU1 SNORD20-201ENST00000384550 80 ntBASIC-1.23□□□□□ -2.61
CCDC197Q8NCU1 AL500527.2-201ENST00000454105 95 ntBASIC-1.23□□□□□ -2.61
CCDC197Q8NCU1 RNA5SP395-201ENST00000516567 118 ntBASIC-1.23□□□□□ -2.61
CCDC197Q8NCU1 U2.7-201ENST00000619197 100 ntBASIC-1.23□□□□□ -2.61
CCDC197Q8NCU1 RNU6-645P-201ENST00000364649 106 ntBASIC-1.24□□□□□ -2.61
CCDC197Q8NCU1 MIR382-201ENST00000637119 76 ntBASIC-1.24□□□□□ -2.61
CCDC197Q8NCU1 RNU6-686P-201ENST00000364839 107 ntBASIC-1.25□□□□□ -2.61
CCDC197Q8NCU1 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.25□□□□□ -2.61
CCDC197Q8NCU1 AC074348.1-201ENST00000426503 132 ntBASIC-1.25□□□□□ -2.61
CCDC197Q8NCU1 RNU6-789P-201ENST00000517105 102 ntBASIC-1.25□□□□□ -2.61
CCDC197Q8NCU1 RNU6-844P-201ENST00000517175 102 ntBASIC-1.25□□□□□ -2.61
CCDC197Q8NCU1 MIR3675-201ENST00000583661 73 ntBASIC-1.25□□□□□ -2.61
CCDC197Q8NCU1 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.25□□□□□ -2.61
CCDC197Q8NCU1 MIR6086-201ENST00000638065 55 ntBASIC-1.25□□□□□ -2.61
CCDC197Q8NCU1 RNU6-330P-201ENST00000363015 107 ntBASIC-1.26□□□□□ -2.61
CCDC197Q8NCU1 SNORA8.1-201ENST00000384250 140 ntBASIC-1.26□□□□□ -2.61
CCDC197Q8NCU1 SNORD83B-201ENST00000386745 93 ntBASIC-1.26□□□□□ -2.61
CCDC197Q8NCU1 RNU6-807P-201ENST00000516805 107 ntBASIC-1.26□□□□□ -2.61
CCDC197Q8NCU1 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.27□□□□□ -2.61
CCDC197Q8NCU1 RNU6-478P-201ENST00000363904 110 ntBASIC-1.27□□□□□ -2.61
CCDC197Q8NCU1 RNU6-30P-201ENST00000384561 107 ntBASIC-1.27□□□□□ -2.61
CCDC197Q8NCU1 SNORA26.4-201ENST00000391188 123 ntBASIC-1.27□□□□□ -2.61
CCDC197Q8NCU1 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.27□□□□□ -2.61
CCDC197Q8NCU1 RNU6-406P-201ENST00000516470 107 ntBASIC-1.27□□□□□ -2.61
CCDC197Q8NCU1 MIR548AX-201ENST00000580117 73 ntBASIC-1.27□□□□□ -2.61
CCDC197Q8NCU1 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.27□□□□□ -2.61
CCDC197Q8NCU1 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.28□□□□□ -2.61
CCDC197Q8NCU1 RNU6-129P-201ENST00000391022 107 ntBASIC-1.28□□□□□ -2.61
CCDC197Q8NCU1 SNORD115-33-201ENST00000363723 82 ntBASIC-1.29□□□□□ -2.62
CCDC197Q8NCU1 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.29□□□□□ -2.62
CCDC197Q8NCU1 MIR548AG1-201ENST00000579932 66 ntBASIC-1.29□□□□□ -2.62
CCDC197Q8NCU1 AC006160.2-201ENST00000637708 154 ntBASIC-1.29□□□□□ -2.62
CCDC197Q8NCU1 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.3□□□□□ -2.62
CCDC197Q8NCU1 snoU13.19-201ENST00000459148 104 ntBASIC-1.3□□□□□ -2.62
CCDC197Q8NCU1 snoU83B.1-201ENST00000517136 88 ntBASIC-1.31□□□□□ -2.62
CCDC197Q8NCU1 uc_338.19-201ENST00000616808 99 ntBASIC-1.31□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 214.6 ms