Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 RNU6-431P-201ENST00000383874 107 ntBASIC-0.93□□□□□ -2.56
SDC3O75056 RNY1P7-201ENST00000384743 110 ntBASIC-0.93□□□□□ -2.56
SDC3O75056 MIR521-2-201ENST00000384818 87 ntBASIC-0.93□□□□□ -2.56
SDC3O75056 SNORD64-201ENST00000386683 67 ntBASIC-0.93□□□□□ -2.56
SDC3O75056 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.93□□□□□ -2.56
SDC3O75056 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.93□□□□□ -2.56
SDC3O75056 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.93□□□□□ -2.56
SDC3O75056 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.93□□□□□ -2.56
SDC3O75056 RNY1P9-201ENST00000532431 109 ntBASIC-0.93□□□□□ -2.56
SDC3O75056 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.93□□□□□ -2.56
SDC3O75056 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.94□□□□□ -2.56
SDC3O75056 SNORD77.2-201ENST00000391045 68 ntBASIC-0.94□□□□□ -2.56
SDC3O75056 SNORD57-201ENST00000448188 72 ntBASIC-0.94□□□□□ -2.56
SDC3O75056 AL500527.2-201ENST00000454105 95 ntBASIC-0.94□□□□□ -2.56
SDC3O75056 RNU6-752P-201ENST00000516376 102 ntBASIC-0.94□□□□□ -2.56
SDC3O75056 RNU6-834P-201ENST00000362367 110 ntBASIC-0.95□□□□□ -2.56
SDC3O75056 AL031737.1-201ENST00000450125 223 ntBASIC-0.95□□□□□ -2.56
SDC3O75056 MIR4668-201ENST00000582284 70 ntBASIC-0.95□□□□□ -2.56
SDC3O75056 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.95□□□□□ -2.56
SDC3O75056 MIR147A-201ENST00000385079 72 ntBASIC-0.96□□□□□ -2.56
SDC3O75056 SNORD83B-201ENST00000386745 93 ntBASIC-0.96□□□□□ -2.56
SDC3O75056 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.96□□□□□ -2.56
SDC3O75056 AL035461.1-201ENST00000421490 332 ntBASIC-0.96□□□□□ -2.56
SDC3O75056 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.96□□□□□ -2.56
SDC3O75056 RNU6-158P-201ENST00000517104 100 ntBASIC-0.96□□□□□ -2.56
SDC3O75056 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.96□□□□□ -2.56
SDC3O75056 MIR6739-201ENST00000622461 75 ntBASIC-0.96□□□□□ -2.56
SDC3O75056 SNORD115-37-201ENST00000363768 82 ntBASIC-0.97□□□□□ -2.56
SDC3O75056 RNU6-518P-201ENST00000516056 96 ntBASIC-0.97□□□□□ -2.56
SDC3O75056 RNU6-313P-201ENST00000516317 112 ntBASIC-0.97□□□□□ -2.56
SDC3O75056 RNU6-633P-201ENST00000362612 103 ntBASIC-0.98□□□□□ -2.57
SDC3O75056 RNU6-681P-201ENST00000364012 104 ntBASIC-0.98□□□□□ -2.57
SDC3O75056 MIR519A2-201ENST00000384990 87 ntBASIC-0.98□□□□□ -2.57
SDC3O75056 RNU7-154P-201ENST00000516194 62 ntBASIC-0.98□□□□□ -2.57
SDC3O75056 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.98□□□□□ -2.57
SDC3O75056 RNU6-479P-201ENST00000516348 105 ntBASIC-0.99□□□□□ -2.57
SDC3O75056 AC140658.3-201ENST00000567603 271 ntBASIC-0.99□□□□□ -2.57
SDC3O75056 uc_338.19-201ENST00000616808 99 ntBASIC-0.99□□□□□ -2.57
SDC3O75056 MIR2052-201ENST00000636055 55 ntBASIC-0.99□□□□□ -2.57
SDC3O75056 RNY4P18-201ENST00000391107 89 ntBASIC-1□□□□□ -2.57
SDC3O75056 MIR382-201ENST00000637119 76 ntBASIC-1□□□□□ -2.57
SDC3O75056 RNU6-924P-201ENST00000362926 108 ntBASIC-1.01□□□□□ -2.57
SDC3O75056 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.01□□□□□ -2.57
SDC3O75056 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.01□□□□□ -2.57
SDC3O75056 MIR3910-1-201ENST00000580936 111 ntBASIC-1.01□□□□□ -2.57
SDC3O75056 MALAT1.1-201ENST00000618249 95 ntBASIC-1.01□□□□□ -2.57
SDC3O75056 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.02□□□□□ -2.57
SDC3O75056 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.02□□□□□ -2.57
SDC3O75056 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.02□□□□□ -2.57
SDC3O75056 MIR587-201ENST00000384845 96 ntBASIC-1.02□□□□□ -2.57
SDC3O75056 RNU6-402P-201ENST00000410678 103 ntBASIC-1.02□□□□□ -2.57
SDC3O75056 RNU6-267P-201ENST00000516714 103 ntBASIC-1.02□□□□□ -2.57
SDC3O75056 AP001318.4-201ENST00000616637 121 ntBASIC-1.02□□□□□ -2.57
SDC3O75056 AC132825.6-201ENST00000638861 357 ntBASIC-1.02□□□□□ -2.57
SDC3O75056 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.03□□□□□ -2.57
SDC3O75056 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.03□□□□□ -2.57
SDC3O75056 RNU2-51P-201ENST00000410708 197 ntBASIC-1.03□□□□□ -2.57
SDC3O75056 AC093729.1-201ENST00000513074 128 ntBASIC-1.03□□□□□ -2.57
SDC3O75056 RNU6-656P-201ENST00000516785 107 ntBASIC-1.03□□□□□ -2.57
SDC3O75056 snoU83B.1-201ENST00000517136 88 ntBASIC-1.03□□□□□ -2.57
SDC3O75056 MIR4499-201ENST00000584834 69 ntBASIC-1.03□□□□□ -2.57
SDC3O75056 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.04□□□□□ -2.58
SDC3O75056 RNU6-219P-201ENST00000364728 107 ntBASIC-1.04□□□□□ -2.58
SDC3O75056 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.04□□□□□ -2.58
SDC3O75056 SNORD116-22-201ENST00000384430 92 ntBASIC-1.04□□□□□ -2.58
SDC3O75056 AL021921.1-201ENST00000442774 93 ntBASIC-1.04□□□□□ -2.58
SDC3O75056 SNORA40.13-201ENST00000516379 120 ntBASIC-1.04□□□□□ -2.58
SDC3O75056 MIR548AG1-201ENST00000579932 66 ntBASIC-1.04□□□□□ -2.58
SDC3O75056 RNU6-330P-201ENST00000363015 107 ntBASIC-1.05□□□□□ -2.58
SDC3O75056 RNU6-624P-201ENST00000363411 107 ntBASIC-1.05□□□□□ -2.58
SDC3O75056 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.05□□□□□ -2.58
SDC3O75056 RNU6-645P-201ENST00000364649 106 ntBASIC-1.06□□□□□ -2.58
SDC3O75056 MIR548C-201ENST00000384815 97 ntBASIC-1.06□□□□□ -2.58
SDC3O75056 SCARNA18B-201ENST00000458806 135 ntBASIC-1.06□□□□□ -2.58
SDC3O75056 SNORD63.1-201ENST00000516178 80 ntBASIC-1.06□□□□□ -2.58
SDC3O75056 U2.7-201ENST00000619197 100 ntBASIC-1.06□□□□□ -2.58
SDC3O75056 MIR548BB-201ENST00000626714 66 ntBASIC-1.06□□□□□ -2.58
SDC3O75056 SNORA63.4-201ENST00000362763 126 ntBASIC-1.07□□□□□ -2.58
SDC3O75056 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.07□□□□□ -2.58
SDC3O75056 SNORA26.4-201ENST00000391188 123 ntBASIC-1.07□□□□□ -2.58
SDC3O75056 SCARNA17-201ENST00000516183 144 ntBASIC-1.07□□□□□ -2.58
SDC3O75056 MIR6738-201ENST00000619620 64 ntBASIC-1.07□□□□□ -2.58
SDC3O75056 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.08□□□□□ -2.58
SDC3O75056 MIR488-201ENST00000365739 83 ntBASIC-1.08□□□□□ -2.58
SDC3O75056 SNORA8.1-201ENST00000384250 140 ntBASIC-1.08□□□□□ -2.58
SDC3O75056 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.08□□□□□ -2.58
SDC3O75056 RNU7-88P-201ENST00000458752 63 ntBASIC-1.08□□□□□ -2.58
SDC3O75056 SNORD115-22-201ENST00000364456 82 ntBASIC-1.09□□□□□ -2.58
SDC3O75056 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.09□□□□□ -2.58
SDC3O75056 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.09□□□□□ -2.58
SDC3O75056 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.09□□□□□ -2.58
SDC3O75056 SNORD115-33-201ENST00000363723 82 ntBASIC-1.1□□□□□ -2.59
SDC3O75056 RNU6-497P-201ENST00000365316 104 ntBASIC-1.1□□□□□ -2.59
SDC3O75056 RNU6-10P-201ENST00000384036 107 ntBASIC-1.1□□□□□ -2.59
SDC3O75056 RNU6-604P-201ENST00000390917 100 ntBASIC-1.1□□□□□ -2.59
SDC3O75056 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.1□□□□□ -2.59
SDC3O75056 RNU6-640P-201ENST00000363693 105 ntBASIC-1.11□□□□□ -2.59
SDC3O75056 RNU6-755P-201ENST00000364400 103 ntBASIC-1.11□□□□□ -2.59
SDC3O75056 RNU6-807P-201ENST00000516805 107 ntBASIC-1.11□□□□□ -2.59
SDC3O75056 RNU6-303P-201ENST00000517091 106 ntBASIC-1.11□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 234.7 ms