Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 MIR2052-201ENST00000636055 55 ntBASIC-0.61□□□□□ -2.51
MSH4O15457 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.62□□□□□ -2.51
MSH4O15457 MIR124-2-201ENST00000385081 109 ntBASIC-0.62□□□□□ -2.51
MSH4O15457 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.62□□□□□ -2.51
MSH4O15457 RNY4P18-201ENST00000391107 89 ntBASIC-0.62□□□□□ -2.51
MSH4O15457 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.62□□□□□ -2.51
MSH4O15457 MIR3681-201ENST00000580089 72 ntBASIC-0.62□□□□□ -2.51
MSH4O15457 MIR548AX-201ENST00000580117 73 ntBASIC-0.62□□□□□ -2.51
MSH4O15457 AL445584.3-201ENST00000617173 78 ntBASIC-0.62□□□□□ -2.51
MSH4O15457 SNORD77.2-201ENST00000391045 68 ntBASIC-0.63□□□□□ -2.51
MSH4O15457 RNU2-51P-201ENST00000410708 197 ntBASIC-0.63□□□□□ -2.51
MSH4O15457 SNORD18.2-201ENST00000459604 70 ntBASIC-0.63□□□□□ -2.51
MSH4O15457 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.63□□□□□ -2.51
MSH4O15457 MIR4668-201ENST00000582284 70 ntBASIC-0.63□□□□□ -2.51
MSH4O15457 AP001318.4-201ENST00000616637 121 ntBASIC-0.63□□□□□ -2.51
MSH4O15457 RNU6-624P-201ENST00000363411 107 ntBASIC-0.64□□□□□ -2.51
MSH4O15457 RNU6-681P-201ENST00000364012 104 ntBASIC-0.64□□□□□ -2.51
MSH4O15457 RNU6-755P-201ENST00000364400 103 ntBASIC-0.65□□□□□ -2.51
MSH4O15457 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.65□□□□□ -2.51
MSH4O15457 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.65□□□□□ -2.51
MSH4O15457 RNU6-497P-201ENST00000365316 104 ntBASIC-0.65□□□□□ -2.51
MSH4O15457 RNY1P7-201ENST00000384743 110 ntBASIC-0.65□□□□□ -2.51
MSH4O15457 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.65□□□□□ -2.51
MSH4O15457 RNA5SP67-201ENST00000516422 131 ntBASIC-0.65□□□□□ -2.51
MSH4O15457 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.65□□□□□ -2.51
MSH4O15457 SNORD114-25-201ENST00000363742 72 ntBASIC-0.66□□□□□ -2.52
MSH4O15457 RNU6-219P-201ENST00000364728 107 ntBASIC-0.66□□□□□ -2.52
MSH4O15457 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.66□□□□□ -2.52
MSH4O15457 AL035461.1-201ENST00000421490 332 ntBASIC-0.66□□□□□ -2.52
MSH4O15457 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.66□□□□□ -2.52
MSH4O15457 SNORA40.13-201ENST00000516379 120 ntBASIC-0.66□□□□□ -2.52
MSH4O15457 SNORD115-37-201ENST00000363768 82 ntBASIC-0.67□□□□□ -2.52
MSH4O15457 RNU6-431P-201ENST00000383874 107 ntBASIC-0.67□□□□□ -2.52
MSH4O15457 MIR519A2-201ENST00000384990 87 ntBASIC-0.67□□□□□ -2.52
MSH4O15457 MIR147A-201ENST00000385079 72 ntBASIC-0.67□□□□□ -2.52
MSH4O15457 AC093729.1-201ENST00000513074 128 ntBASIC-0.67□□□□□ -2.52
MSH4O15457 RNU7-154P-201ENST00000516194 62 ntBASIC-0.67□□□□□ -2.52
MSH4O15457 AC140658.3-201ENST00000567603 271 ntBASIC-0.67□□□□□ -2.52
MSH4O15457 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.67□□□□□ -2.52
MSH4O15457 MALAT1.1-201ENST00000618249 95 ntBASIC-0.67□□□□□ -2.52
MSH4O15457 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.67□□□□□ -2.52
MSH4O15457 SNORD114-17-201ENST00000364699 75 ntBASIC-0.68□□□□□ -2.52
MSH4O15457 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.68□□□□□ -2.52
MSH4O15457 SNORD116-22-201ENST00000384430 92 ntBASIC-0.68□□□□□ -2.52
MSH4O15457 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.68□□□□□ -2.52
MSH4O15457 RNU6-656P-201ENST00000516785 107 ntBASIC-0.68□□□□□ -2.52
MSH4O15457 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.69□□□□□ -2.52
MSH4O15457 SNORD64-201ENST00000386683 67 ntBASIC-0.69□□□□□ -2.52
MSH4O15457 AL606753.1-201ENST00000427435 87 ntBASIC-0.69□□□□□ -2.52
MSH4O15457 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.69□□□□□ -2.52
MSH4O15457 RNU6-267P-201ENST00000516714 103 ntBASIC-0.69□□□□□ -2.52
MSH4O15457 RNU6-924P-201ENST00000362926 108 ntBASIC-0.7□□□□□ -2.52
MSH4O15457 MIR196A1-201ENST00000388006 70 ntBASIC-0.7□□□□□ -2.52
MSH4O15457 RNU6-402P-201ENST00000410678 103 ntBASIC-0.7□□□□□ -2.52
MSH4O15457 AL500527.2-201ENST00000454105 95 ntBASIC-0.7□□□□□ -2.52
MSH4O15457 RNU6-518P-201ENST00000516056 96 ntBASIC-0.7□□□□□ -2.52
MSH4O15457 SCARNA17-201ENST00000516183 144 ntBASIC-0.7□□□□□ -2.52
MSH4O15457 RNU6-557P-201ENST00000516842 110 ntBASIC-0.7□□□□□ -2.52
MSH4O15457 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.7□□□□□ -2.52
MSH4O15457 MIR548BB-201ENST00000626714 66 ntBASIC-0.7□□□□□ -2.52
MSH4O15457 SNORA63.4-201ENST00000362763 126 ntBASIC-0.71□□□□□ -2.52
MSH4O15457 RNU6-640P-201ENST00000363693 105 ntBASIC-0.71□□□□□ -2.52
MSH4O15457 MIR488-201ENST00000365739 83 ntBASIC-0.71□□□□□ -2.52
MSH4O15457 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.71□□□□□ -2.52
MSH4O15457 AL021921.1-201ENST00000442774 93 ntBASIC-0.71□□□□□ -2.52
MSH4O15457 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.72□□□□□ -2.52
MSH4O15457 U2.7-201ENST00000619197 100 ntBASIC-0.72□□□□□ -2.52
MSH4O15457 MIR382-201ENST00000637119 76 ntBASIC-0.72□□□□□ -2.52
MSH4O15457 RNU6-215P-201ENST00000365169 102 ntBASIC-0.73□□□□□ -2.53
MSH4O15457 RNU6-32P-201ENST00000383948 107 ntBASIC-0.73□□□□□ -2.53
MSH4O15457 RNU6-147P-201ENST00000383983 107 ntBASIC-0.73□□□□□ -2.53
MSH4O15457 RNU6-13P-201ENST00000384248 107 ntBASIC-0.73□□□□□ -2.53
MSH4O15457 RNU6-12P-201ENST00000384604 107 ntBASIC-0.73□□□□□ -2.53
MSH4O15457 RNU6-41P-201ENST00000384741 107 ntBASIC-0.73□□□□□ -2.53
MSH4O15457 AL603908.1-201ENST00000406098 201 ntBASIC-0.73□□□□□ -2.53
MSH4O15457 RNU6-303P-201ENST00000517091 106 ntBASIC-0.73□□□□□ -2.53
MSH4O15457 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.73□□□□□ -2.53
MSH4O15457 RNU6-330P-201ENST00000363015 107 ntBASIC-0.74□□□□□ -2.53
MSH4O15457 RNU6-675P-201ENST00000384236 104 ntBASIC-0.74□□□□□ -2.53
MSH4O15457 AC074348.1-201ENST00000426503 132 ntBASIC-0.74□□□□□ -2.53
MSH4O15457 MIR548AG1-201ENST00000579932 66 ntBASIC-0.74□□□□□ -2.53
MSH4O15457 MIR3675-201ENST00000583661 73 ntBASIC-0.74□□□□□ -2.53
MSH4O15457 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.75□□□□□ -2.53
MSH4O15457 RNU6-478P-201ENST00000363904 110 ntBASIC-0.75□□□□□ -2.53
MSH4O15457 RNU6-645P-201ENST00000364649 106 ntBASIC-0.75□□□□□ -2.53
MSH4O15457 RNU6-686P-201ENST00000364839 107 ntBASIC-0.75□□□□□ -2.53
MSH4O15457 SNORD20-201ENST00000384550 80 ntBASIC-0.75□□□□□ -2.53
MSH4O15457 SNORD83B-201ENST00000386745 93 ntBASIC-0.75□□□□□ -2.53
MSH4O15457 SNORA26.4-201ENST00000391188 123 ntBASIC-0.75□□□□□ -2.53
MSH4O15457 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.75□□□□□ -2.53
MSH4O15457 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.75□□□□□ -2.53
MSH4O15457 RNU6-919P-201ENST00000516731 104 ntBASIC-0.75□□□□□ -2.53
MSH4O15457 SNORD115-33-201ENST00000363723 82 ntBASIC-0.76□□□□□ -2.53
MSH4O15457 RNU6-1081P-201ENST00000384537 107 ntBASIC-0.76□□□□□ -2.53
MSH4O15457 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.76□□□□□ -2.53
MSH4O15457 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.76□□□□□ -2.53
MSH4O15457 SCARNA18B-201ENST00000458806 135 ntBASIC-0.76□□□□□ -2.53
MSH4O15457 SNORD63.1-201ENST00000516178 80 ntBASIC-0.76□□□□□ -2.53
MSH4O15457 RNU6-807P-201ENST00000516805 107 ntBASIC-0.76□□□□□ -2.53
MSH4O15457 MIR587-201ENST00000384845 96 ntBASIC-0.77□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms