Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPTBN4Q9H254 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.91■□□□□ 0.46
SPTBN4Q9H254 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SPTBN4Q9H254 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.91■□□□□ 0.46
SPTBN4Q9H254 KRT18P2-201ENST00000447938 1258 ntBASIC17.91■□□□□ 0.46
SPTBN4Q9H254 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPTBN4Q9H254 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.91■□□□□ 0.46
SPTBN4Q9H254 MIR3180-5-201ENST00000583743 153 ntBASIC17.91■□□□□ 0.46
SPTBN4Q9H254 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPTBN4Q9H254 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SPTBN4Q9H254 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPTBN4Q9H254 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPTBN4Q9H254 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SPTBN4Q9H254 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SPTBN4Q9H254 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.9■□□□□ 0.46
SPTBN4Q9H254 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
SPTBN4Q9H254 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.9■□□□□ 0.46
SPTBN4Q9H254 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SPTBN4Q9H254 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SPTBN4Q9H254 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
SPTBN4Q9H254 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SPTBN4Q9H254 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SPTBN4Q9H254 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SPTBN4Q9H254 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SPTBN4Q9H254 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SPTBN4Q9H254 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SPTBN4Q9H254 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.9■□□□□ 0.46
SPTBN4Q9H254 AC010240.3-201ENST00000607688 395 ntBASIC17.9■□□□□ 0.46
SPTBN4Q9H254 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPTBN4Q9H254 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.9■□□□□ 0.46
SPTBN4Q9H254 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPTBN4Q9H254 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPTBN4Q9H254 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPTBN4Q9H254 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.9■□□□□ 0.46
SPTBN4Q9H254 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SPTBN4Q9H254 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.9■□□□□ 0.46
SPTBN4Q9H254 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.9■□□□□ 0.46
SPTBN4Q9H254 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPTBN4Q9H254 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.89■□□□□ 0.46
SPTBN4Q9H254 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.89■□□□□ 0.46
SPTBN4Q9H254 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.89■□□□□ 0.46
SPTBN4Q9H254 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SPTBN4Q9H254 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.89■□□□□ 0.46
SPTBN4Q9H254 AC092910.1-201ENST00000482027 1129 ntBASIC17.89■□□□□ 0.46
SPTBN4Q9H254 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.89■□□□□ 0.46
SPTBN4Q9H254 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.89■□□□□ 0.46
SPTBN4Q9H254 AC025062.2-201ENST00000605477 670 ntBASIC17.89■□□□□ 0.46
SPTBN4Q9H254 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SPTBN4Q9H254 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SPTBN4Q9H254 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SPTBN4Q9H254 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.89■□□□□ 0.45
SPTBN4Q9H254 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SPTBN4Q9H254 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SPTBN4Q9H254 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SPTBN4Q9H254 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SPTBN4Q9H254 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SPTBN4Q9H254 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SPTBN4Q9H254 AC009947.1-201ENST00000444350 727 ntBASIC17.89■□□□□ 0.45
SPTBN4Q9H254 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SPTBN4Q9H254 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.89■□□□□ 0.45
SPTBN4Q9H254 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.89■□□□□ 0.45
SPTBN4Q9H254 RN7SL204P-201ENST00000582831 262 ntBASIC17.89■□□□□ 0.45
SPTBN4Q9H254 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SPTBN4Q9H254 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SPTBN4Q9H254 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.89■□□□□ 0.45
SPTBN4Q9H254 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.89■□□□□ 0.45
SPTBN4Q9H254 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SPTBN4Q9H254 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SPTBN4Q9H254 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SPTBN4Q9H254 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SPTBN4Q9H254 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SPTBN4Q9H254 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SPTBN4Q9H254 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SPTBN4Q9H254 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
SPTBN4Q9H254 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SPTBN4Q9H254 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.88■□□□□ 0.45
SPTBN4Q9H254 AC092865.6-201ENST00000642101 219 ntBASIC17.88■□□□□ 0.45
SPTBN4Q9H254 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SPTBN4Q9H254 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SPTBN4Q9H254 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SPTBN4Q9H254 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.88■□□□□ 0.45
SPTBN4Q9H254 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SPTBN4Q9H254 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SPTBN4Q9H254 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SPTBN4Q9H254 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
SPTBN4Q9H254 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.88■□□□□ 0.45
SPTBN4Q9H254 AC093214.1-201ENST00000511688 1107 ntBASIC17.88■□□□□ 0.45
SPTBN4Q9H254 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.88■□□□□ 0.45
SPTBN4Q9H254 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SPTBN4Q9H254 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.88■□□□□ 0.45
SPTBN4Q9H254 AC105339.3-201ENST00000560043 636 ntBASIC17.88■□□□□ 0.45
SPTBN4Q9H254 AL353692.3-201ENST00000407031 1396 ntBASIC17.88■□□□□ 0.45
SPTBN4Q9H254 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SPTBN4Q9H254 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.88■□□□□ 0.45
SPTBN4Q9H254 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.88■□□□□ 0.45
SPTBN4Q9H254 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SPTBN4Q9H254 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SPTBN4Q9H254 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.87■□□□□ 0.45
SPTBN4Q9H254 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SPTBN4Q9H254 AP002414.1-201ENST00000391405 1147 ntBASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms