Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 AC211486.1-202ENST00000416371 468 ntBASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 AL591424.1-201ENST00000442569 1213 ntBASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 AC211476.1-201ENST00000503899 468 ntBASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 AC145285.3-201ENST00000564603 959 ntBASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 AC090616.6-201ENST00000582640 721 ntBASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNTNAP3BQ96NU0 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CNTNAP3BQ96NU0 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNTNAP3BQ96NU0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNTNAP3BQ96NU0 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.94■□□□□ 0.46
CNTNAP3BQ96NU0 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CNTNAP3BQ96NU0 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNTNAP3BQ96NU0 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNTNAP3BQ96NU0 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.94■□□□□ 0.46
CNTNAP3BQ96NU0 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.94■□□□□ 0.46
CNTNAP3BQ96NU0 AL645939.2-201ENST00000427340 991 ntBASIC17.94■□□□□ 0.46
CNTNAP3BQ96NU0 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
CNTNAP3BQ96NU0 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.94■□□□□ 0.46
CNTNAP3BQ96NU0 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.94■□□□□ 0.46
CNTNAP3BQ96NU0 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.94■□□□□ 0.46
CNTNAP3BQ96NU0 AC040169.1-201ENST00000565382 521 ntBASIC17.94■□□□□ 0.46
CNTNAP3BQ96NU0 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.94■□□□□ 0.46
CNTNAP3BQ96NU0 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CNTNAP3BQ96NU0 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNTNAP3BQ96NU0 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNTNAP3BQ96NU0 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNTNAP3BQ96NU0 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CNTNAP3BQ96NU0 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.94■□□□□ 0.46
CNTNAP3BQ96NU0 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.94■□□□□ 0.46
CNTNAP3BQ96NU0 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CNTNAP3BQ96NU0 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNTNAP3BQ96NU0 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CNTNAP3BQ96NU0 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNTNAP3BQ96NU0 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNTNAP3BQ96NU0 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNTNAP3BQ96NU0 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CNTNAP3BQ96NU0 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.93■□□□□ 0.46
CNTNAP3BQ96NU0 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
CNTNAP3BQ96NU0 KRT18P3-201ENST00000451602 1288 ntBASIC17.93■□□□□ 0.46
CNTNAP3BQ96NU0 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.93■□□□□ 0.46
CNTNAP3BQ96NU0 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CNTNAP3BQ96NU0 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.93■□□□□ 0.46
CNTNAP3BQ96NU0 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.93■□□□□ 0.46
CNTNAP3BQ96NU0 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.93■□□□□ 0.46
CNTNAP3BQ96NU0 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.93■□□□□ 0.46
CNTNAP3BQ96NU0 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.93■□□□□ 0.46
CNTNAP3BQ96NU0 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNTNAP3BQ96NU0 SPCS2P1-201ENST00000561636 679 ntBASIC17.93■□□□□ 0.46
CNTNAP3BQ96NU0 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.93■□□□□ 0.46
CNTNAP3BQ96NU0 MIR4674-201ENST00000582457 87 ntBASIC17.93■□□□□ 0.46
CNTNAP3BQ96NU0 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.93■□□□□ 0.46
CNTNAP3BQ96NU0 AL136038.4-201ENST00000603606 1261 ntBASIC17.93■□□□□ 0.46
CNTNAP3BQ96NU0 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CNTNAP3BQ96NU0 MIR2861-201ENST00000636310 90 ntBASIC17.93■□□□□ 0.46
CNTNAP3BQ96NU0 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CNTNAP3BQ96NU0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNTNAP3BQ96NU0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.93■□□□□ 0.46
CNTNAP3BQ96NU0 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.93■□□□□ 0.46
CNTNAP3BQ96NU0 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.93■□□□□ 0.46
CNTNAP3BQ96NU0 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CNTNAP3BQ96NU0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms