Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
ALPK3Q96L96 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.51■□□□□ 0.87
ALPK3Q96L96 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.51■□□□□ 0.87
ALPK3Q96L96 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.51■□□□□ 0.87
ALPK3Q96L96 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.51■□□□□ 0.87
ALPK3Q96L96 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
ALPK3Q96L96 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ALPK3Q96L96 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.51■□□□□ 0.87
ALPK3Q96L96 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ALPK3Q96L96 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ALPK3Q96L96 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
ALPK3Q96L96 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
ALPK3Q96L96 AC007375.3-201ENST00000600936 2314 ntBASIC20.51■□□□□ 0.87
ALPK3Q96L96 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ALPK3Q96L96 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ALPK3Q96L96 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.51■□□□□ 0.87
ALPK3Q96L96 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ALPK3Q96L96 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.51■□□□□ 0.87
ALPK3Q96L96 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ALPK3Q96L96 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC20.51■□□□□ 0.87
ALPK3Q96L96 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ALPK3Q96L96 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
ALPK3Q96L96 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ALPK3Q96L96 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
ALPK3Q96L96 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
ALPK3Q96L96 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ALPK3Q96L96 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
ALPK3Q96L96 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC20.5■□□□□ 0.87
ALPK3Q96L96 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
ALPK3Q96L96 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ALPK3Q96L96 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
ALPK3Q96L96 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.5■□□□□ 0.87
ALPK3Q96L96 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC20.5■□□□□ 0.87
ALPK3Q96L96 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.5■□□□□ 0.87
ALPK3Q96L96 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.5■□□□□ 0.87
ALPK3Q96L96 AC024563.2-201ENST00000603282 481 ntBASIC20.5■□□□□ 0.87
ALPK3Q96L96 AC134684.3-201ENST00000641758 218 ntBASIC20.5■□□□□ 0.87
ALPK3Q96L96 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.5■□□□□ 0.87
ALPK3Q96L96 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.5■□□□□ 0.87
ALPK3Q96L96 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.5■□□□□ 0.87
ALPK3Q96L96 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ALPK3Q96L96 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.49■□□□□ 0.87
ALPK3Q96L96 AC004832.2-201ENST00000426397 482 ntBASIC20.49■□□□□ 0.87
ALPK3Q96L96 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC20.49■□□□□ 0.87
ALPK3Q96L96 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
ALPK3Q96L96 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC20.49■□□□□ 0.87
ALPK3Q96L96 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ALPK3Q96L96 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
ALPK3Q96L96 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.49■□□□□ 0.87
ALPK3Q96L96 KRT8P3-201ENST00000519669 1449 ntBASIC20.49■□□□□ 0.87
ALPK3Q96L96 AC104109.2-201ENST00000602919 1418 ntBASIC20.49■□□□□ 0.87
ALPK3Q96L96 TREX1-205ENST00000625293 1783 ntBASIC20.49■□□□□ 0.87
ALPK3Q96L96 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ALPK3Q96L96 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
ALPK3Q96L96 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ALPK3Q96L96 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
ALPK3Q96L96 AL591424.1-201ENST00000442569 1213 ntBASIC20.49■□□□□ 0.87
ALPK3Q96L96 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.49■□□□□ 0.87
ALPK3Q96L96 AL591684.3-201ENST00000605187 298 ntBASIC20.49■□□□□ 0.87
ALPK3Q96L96 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
ALPK3Q96L96 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ALPK3Q96L96 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.48■□□□□ 0.87
ALPK3Q96L96 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.48■□□□□ 0.87
ALPK3Q96L96 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ALPK3Q96L96 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
ALPK3Q96L96 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
ALPK3Q96L96 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ALPK3Q96L96 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ALPK3Q96L96 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ALPK3Q96L96 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ALPK3Q96L96 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ALPK3Q96L96 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
ALPK3Q96L96 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.48■□□□□ 0.87
ALPK3Q96L96 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ALPK3Q96L96 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.48■□□□□ 0.87
ALPK3Q96L96 AC009237.14-201ENST00000609975 1594 ntBASIC20.48■□□□□ 0.87
ALPK3Q96L96 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ALPK3Q96L96 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
ALPK3Q96L96 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ALPK3Q96L96 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ALPK3Q96L96 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ALPK3Q96L96 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
ALPK3Q96L96 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC20.47■□□□□ 0.87
ALPK3Q96L96 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ALPK3Q96L96 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
ALPK3Q96L96 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ALPK3Q96L96 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ALPK3Q96L96 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ALPK3Q96L96 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.47■□□□□ 0.87
ALPK3Q96L96 KRT89P-201ENST00000620027 1478 ntBASIC20.47■□□□□ 0.87
ALPK3Q96L96 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ALPK3Q96L96 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ALPK3Q96L96 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
ALPK3Q96L96 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
ALPK3Q96L96 POM121L3P-201ENST00000419331 1163 ntBASIC20.47■□□□□ 0.87
ALPK3Q96L96 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC20.47■□□□□ 0.87
ALPK3Q96L96 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ALPK3Q96L96 SART3-203ENST00000546611 1184 ntBASIC20.47■□□□□ 0.87
ALPK3Q96L96 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC20.47■□□□□ 0.87
ALPK3Q96L96 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms