Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF44Q7L0R7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF44Q7L0R7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.04■□□□□ 0.48
RNF44Q7L0R7 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RNF44Q7L0R7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.04■□□□□ 0.48
RNF44Q7L0R7 GPAT2P1-201ENST00000444924 1672 ntBASIC18.04■□□□□ 0.48
RNF44Q7L0R7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF44Q7L0R7 AL137013.1-201ENST00000432946 1228 ntBASIC18.04■□□□□ 0.48
RNF44Q7L0R7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.04■□□□□ 0.48
RNF44Q7L0R7 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF44Q7L0R7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF44Q7L0R7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF44Q7L0R7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF44Q7L0R7 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF44Q7L0R7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.04■□□□□ 0.48
RNF44Q7L0R7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF44Q7L0R7 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
RNF44Q7L0R7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF44Q7L0R7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF44Q7L0R7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF44Q7L0R7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF44Q7L0R7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RNF44Q7L0R7 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF44Q7L0R7 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF44Q7L0R7 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF44Q7L0R7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF44Q7L0R7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF44Q7L0R7 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF44Q7L0R7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF44Q7L0R7 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF44Q7L0R7 AL023284.2-201ENST00000405850 579 ntBASIC18.03■□□□□ 0.48
RNF44Q7L0R7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF44Q7L0R7 FAM210CP-201ENST00000445714 574 ntBASIC18.03■□□□□ 0.48
RNF44Q7L0R7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.03■□□□□ 0.48
RNF44Q7L0R7 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF44Q7L0R7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF44Q7L0R7 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF44Q7L0R7 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RNF44Q7L0R7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF44Q7L0R7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.03■□□□□ 0.48
RNF44Q7L0R7 AL512604.3-201ENST00000569583 964 ntBASIC18.03■□□□□ 0.48
RNF44Q7L0R7 AC092865.7-201ENST00000641832 219 ntBASIC18.03■□□□□ 0.48
RNF44Q7L0R7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF44Q7L0R7 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF44Q7L0R7 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF44Q7L0R7 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF44Q7L0R7 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF44Q7L0R7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RNF44Q7L0R7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF44Q7L0R7 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF44Q7L0R7 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF44Q7L0R7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
RNF44Q7L0R7 AL512353.2-201ENST00000448759 1962 ntBASIC18.02■□□□□ 0.48
RNF44Q7L0R7 AC090340.1-201ENST00000620778 4980 ntBASIC18.02■□□□□ 0.48
RNF44Q7L0R7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF44Q7L0R7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF44Q7L0R7 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF44Q7L0R7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.02■□□□□ 0.48
RNF44Q7L0R7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF44Q7L0R7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
RNF44Q7L0R7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
RNF44Q7L0R7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
RNF44Q7L0R7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.02■□□□□ 0.48
RNF44Q7L0R7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.02■□□□□ 0.48
RNF44Q7L0R7 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.02■□□□□ 0.48
RNF44Q7L0R7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.48
RNF44Q7L0R7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.02■□□□□ 0.47
RNF44Q7L0R7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RNF44Q7L0R7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNF44Q7L0R7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.47
RNF44Q7L0R7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RNF44Q7L0R7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNF44Q7L0R7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
RNF44Q7L0R7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNF44Q7L0R7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.02■□□□□ 0.47
RNF44Q7L0R7 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF44Q7L0R7 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.01■□□□□ 0.47
RNF44Q7L0R7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
RNF44Q7L0R7 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF44Q7L0R7 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
RNF44Q7L0R7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF44Q7L0R7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RNF44Q7L0R7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.01■□□□□ 0.47
RNF44Q7L0R7 KRT8P45-201ENST00000414328 1447 ntBASIC18.01■□□□□ 0.47
RNF44Q7L0R7 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF44Q7L0R7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF44Q7L0R7 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF44Q7L0R7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF44Q7L0R7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF44Q7L0R7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF44Q7L0R7 LIN28AP1-201ENST00000429574 405 ntBASIC18.01■□□□□ 0.47
RNF44Q7L0R7 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.01■□□□□ 0.47
RNF44Q7L0R7 KRT18P57-201ENST00000443599 1254 ntBASIC18.01■□□□□ 0.47
RNF44Q7L0R7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF44Q7L0R7 ATP5G1P1-201ENST00000448724 379 ntBASIC18.01■□□□□ 0.47
RNF44Q7L0R7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RNF44Q7L0R7 RN7SL850P-201ENST00000579959 291 ntBASIC18.01■□□□□ 0.47
RNF44Q7L0R7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF44Q7L0R7 AL138966.2-201ENST00000621997 464 ntBASIC18.01■□□□□ 0.47
RNF44Q7L0R7 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms