Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
ZC3H6P61129 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
ZC3H6P61129 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
ZC3H6P61129 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
ZC3H6P61129 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC25.12■■□□□ 1.61
ZC3H6P61129 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC25.12■■□□□ 1.61
ZC3H6P61129 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ZC3H6P61129 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
ZC3H6P61129 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ZC3H6P61129 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ZC3H6P61129 ENSA-205ENST00000361532 792 ntTSL 2 BASIC25.12■■□□□ 1.61
ZC3H6P61129 MIR574-201ENST00000385209 96 ntBASIC25.12■■□□□ 1.61
ZC3H6P61129 SAPCD2P3-201ENST00000455031 850 ntBASIC25.12■■□□□ 1.61
ZC3H6P61129 MOK-208ENST00000519058 917 ntTSL 2 BASIC25.12■■□□□ 1.61
ZC3H6P61129 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ZC3H6P61129 REXO1L6P-202ENST00000619970 1078 ntBASIC25.12■■□□□ 1.61
ZC3H6P61129 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC25.12■■□□□ 1.61
ZC3H6P61129 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC25.12■■□□□ 1.61
ZC3H6P61129 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ZC3H6P61129 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC25.12■■□□□ 1.61
ZC3H6P61129 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
ZC3H6P61129 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ZC3H6P61129 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
ZC3H6P61129 NSUN5P1-202ENST00000421140 1535 ntBASIC25.12■■□□□ 1.61
ZC3H6P61129 NSUN5P2-203ENST00000457352 1529 ntBASIC25.12■■□□□ 1.61
ZC3H6P61129 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC25.12■■□□□ 1.61
ZC3H6P61129 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
ZC3H6P61129 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
ZC3H6P61129 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
ZC3H6P61129 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
ZC3H6P61129 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC25.11■■□□□ 1.61
ZC3H6P61129 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
ZC3H6P61129 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
ZC3H6P61129 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
ZC3H6P61129 IGHGP-201ENST00000390555 1178 ntBASIC25.11■■□□□ 1.61
ZC3H6P61129 NUS1P2-201ENST00000417358 873 ntBASIC25.11■■□□□ 1.61
ZC3H6P61129 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
ZC3H6P61129 RN7SL606P-201ENST00000472779 293 ntBASIC25.11■■□□□ 1.61
ZC3H6P61129 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC25.11■■□□□ 1.61
ZC3H6P61129 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC25.11■■□□□ 1.61
ZC3H6P61129 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
ZC3H6P61129 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC25.11■■□□□ 1.61
ZC3H6P61129 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
ZC3H6P61129 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
ZC3H6P61129 IL9RP2-201ENST00000423948 1312 ntBASIC25.11■■□□□ 1.61
ZC3H6P61129 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC25.1■■□□□ 1.61
ZC3H6P61129 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
ZC3H6P61129 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
ZC3H6P61129 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC25.1■■□□□ 1.61
ZC3H6P61129 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
ZC3H6P61129 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
ZC3H6P61129 MIR564-202ENST00000385049 94 ntBASIC25.1■■□□□ 1.61
ZC3H6P61129 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC25.1■■□□□ 1.61
ZC3H6P61129 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
ZC3H6P61129 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC25.1■■□□□ 1.61
ZC3H6P61129 SLC25A1P1-201ENST00000528351 927 ntBASIC25.1■■□□□ 1.61
ZC3H6P61129 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
ZC3H6P61129 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
ZC3H6P61129 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
ZC3H6P61129 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC25.1■■□□□ 1.61
ZC3H6P61129 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
ZC3H6P61129 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC25.1■■□□□ 1.61
ZC3H6P61129 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
ZC3H6P61129 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
ZC3H6P61129 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
ZC3H6P61129 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
ZC3H6P61129 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC25.09■■□□□ 1.61
ZC3H6P61129 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC25.09■■□□□ 1.61
ZC3H6P61129 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ZC3H6P61129 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
ZC3H6P61129 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC25.09■■□□□ 1.61
ZC3H6P61129 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
ZC3H6P61129 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
ZC3H6P61129 CCNC-219ENST00000627680 896 ntTSL 5 BASIC25.09■■□□□ 1.61
ZC3H6P61129 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC25.09■■□□□ 1.61
ZC3H6P61129 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
ZC3H6P61129 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC25.09■■□□□ 1.61
ZC3H6P61129 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
ZC3H6P61129 TP73-202ENST00000354437 2140 ntTSL 5 BASIC25.09■■□□□ 1.61
ZC3H6P61129 Z82202.1-201ENST00000623446 1880 ntBASIC25.09■■□□□ 1.61
ZC3H6P61129 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ZC3H6P61129 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
ZC3H6P61129 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC25.08■■□□□ 1.61
ZC3H6P61129 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
ZC3H6P61129 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
ZC3H6P61129 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
ZC3H6P61129 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
ZC3H6P61129 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC25.08■■□□□ 1.61
ZC3H6P61129 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC25.08■■□□□ 1.61
ZC3H6P61129 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC25.08■■□□□ 1.61
ZC3H6P61129 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
ZC3H6P61129 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC25.08■■□□□ 1.61
ZC3H6P61129 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC25.08■■□□□ 1.61
ZC3H6P61129 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC25.08■■□□□ 1.61
ZC3H6P61129 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC25.08■■□□□ 1.6
ZC3H6P61129 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC25.08■■□□□ 1.6
ZC3H6P61129 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
ZC3H6P61129 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC25.07■■□□□ 1.6
ZC3H6P61129 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC25.07■■□□□ 1.6
ZC3H6P61129 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms