Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH4P55283 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH4P55283 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH4P55283 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDH4P55283 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH4P55283 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
CDH4P55283 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH4P55283 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH4P55283 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.24■□□□□ 0.67
CDH4P55283 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDH4P55283 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDH4P55283 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH4P55283 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH4P55283 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDH4P55283 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH4P55283 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.24■□□□□ 0.67
CDH4P55283 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.24■□□□□ 0.67
CDH4P55283 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
CDH4P55283 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH4P55283 AC139887.4-201ENST00000607877 719 ntBASIC19.24■□□□□ 0.67
CDH4P55283 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH4P55283 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH4P55283 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDH4P55283 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH4P55283 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH4P55283 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CDH4P55283 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH4P55283 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH4P55283 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDH4P55283 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CDH4P55283 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CDH4P55283 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDH4P55283 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDH4P55283 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH4P55283 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDH4P55283 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH4P55283 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDH4P55283 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH4P55283 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDH4P55283 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.23■□□□□ 0.67
CDH4P55283 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.23■□□□□ 0.67
CDH4P55283 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.23■□□□□ 0.67
CDH4P55283 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
CDH4P55283 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.23■□□□□ 0.67
CDH4P55283 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDH4P55283 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH4P55283 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH4P55283 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH4P55283 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH4P55283 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.23■□□□□ 0.67
CDH4P55283 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CDH4P55283 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH4P55283 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH4P55283 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.23■□□□□ 0.67
CDH4P55283 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH4P55283 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH4P55283 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH4P55283 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH4P55283 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH4P55283 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH4P55283 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH4P55283 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.22■□□□□ 0.67
CDH4P55283 MIR564-202ENST00000385049 94 ntBASIC19.22■□□□□ 0.67
CDH4P55283 AK4P3-201ENST00000418260 669 ntBASIC19.22■□□□□ 0.67
CDH4P55283 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.22■□□□□ 0.67
CDH4P55283 YBX1P2-201ENST00000489612 999 ntBASIC19.22■□□□□ 0.67
CDH4P55283 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.22■□□□□ 0.67
CDH4P55283 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH4P55283 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH4P55283 AC140113.3-201ENST00000605663 199 ntBASIC19.22■□□□□ 0.67
CDH4P55283 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH4P55283 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH4P55283 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CDH4P55283 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.22■□□□□ 0.67
CDH4P55283 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH4P55283 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CDH4P55283 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH4P55283 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH4P55283 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH4P55283 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH4P55283 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.22■□□□□ 0.67
CDH4P55283 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.22■□□□□ 0.67
CDH4P55283 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.21■□□□□ 0.67
CDH4P55283 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH4P55283 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDH4P55283 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDH4P55283 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.21■□□□□ 0.67
CDH4P55283 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH4P55283 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDH4P55283 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH4P55283 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH4P55283 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CDH4P55283 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.21■□□□□ 0.67
CDH4P55283 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.21■□□□□ 0.67
CDH4P55283 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
CDH4P55283 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.21■□□□□ 0.67
CDH4P55283 DUX4L26-201ENST00000489078 1255 ntBASIC19.21■□□□□ 0.67
CDH4P55283 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.21■□□□□ 0.67
CDH4P55283 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDH4P55283 AL023973.1-201ENST00000624619 620 ntBASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms