Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLC1A3P43003 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.33■□□□□ 0.36
SLC1A3P43003 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.33■□□□□ 0.36
SLC1A3P43003 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC1A3P43003 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC1A3P43003 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A3P43003 WIZP1-201ENST00000531444 2299 ntBASIC17.32■□□□□ 0.36
SLC1A3P43003 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SLC1A3P43003 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A3P43003 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A3P43003 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A3P43003 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC1A3P43003 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A3P43003 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SLC1A3P43003 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A3P43003 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A3P43003 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A3P43003 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A3P43003 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A3P43003 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC1A3P43003 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC1A3P43003 AP001412.1-201ENST00000608405 714 ntBASIC17.32■□□□□ 0.36
SLC1A3P43003 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC1A3P43003 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC1A3P43003 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SLC1A3P43003 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A3P43003 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A3P43003 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A3P43003 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A3P43003 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC1A3P43003 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A3P43003 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A3P43003 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A3P43003 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A3P43003 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC1A3P43003 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC1A3P43003 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SLC1A3P43003 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC1A3P43003 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC1A3P43003 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC1A3P43003 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SLC1A3P43003 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC1A3P43003 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC1A3P43003 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC1A3P43003 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
SLC1A3P43003 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.31■□□□□ 0.36
SLC1A3P43003 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
SLC1A3P43003 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC1A3P43003 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC1A3P43003 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC1A3P43003 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SLC1A3P43003 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC1A3P43003 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC1A3P43003 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC1A3P43003 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC1A3P43003 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC1A3P43003 RPS2P55-201ENST00000397318 883 ntBASIC17.31■□□□□ 0.36
SLC1A3P43003 AC091390.4-202ENST00000476426 537 ntBASIC17.31■□□□□ 0.36
SLC1A3P43003 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.31■□□□□ 0.36
SLC1A3P43003 AC107956.1-201ENST00000494359 873 ntBASIC17.31■□□□□ 0.36
SLC1A3P43003 PRSS44-201ENST00000515154 1146 ntBASIC17.31■□□□□ 0.36
SLC1A3P43003 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
SLC1A3P43003 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.31■□□□□ 0.36
SLC1A3P43003 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SLC1A3P43003 CD177P1-201ENST00000606252 935 ntBASIC17.31■□□□□ 0.36
SLC1A3P43003 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC1A3P43003 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC1A3P43003 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC1A3P43003 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC1A3P43003 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC1A3P43003 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC1A3P43003 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC1A3P43003 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC1A3P43003 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC1A3P43003 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC1A3P43003 AC005332.8-201ENST00000622750 2735 ntBASIC17.31■□□□□ 0.36
SLC1A3P43003 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC1A3P43003 KRT8P11-201ENST00000409686 1436 ntBASIC17.3■□□□□ 0.36
SLC1A3P43003 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC1A3P43003 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC1A3P43003 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC1A3P43003 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC1A3P43003 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC1A3P43003 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC1A3P43003 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC1A3P43003 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC1A3P43003 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC1A3P43003 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC1A3P43003 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SLC1A3P43003 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC1A3P43003 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC1A3P43003 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC1A3P43003 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.3■□□□□ 0.36
SLC1A3P43003 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.3■□□□□ 0.36
SLC1A3P43003 FAM197Y1-201ENST00000421178 764 ntBASIC17.3■□□□□ 0.36
SLC1A3P43003 AC012618.2-201ENST00000428058 849 ntBASIC17.3■□□□□ 0.36
SLC1A3P43003 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SLC1A3P43003 AC011298.2-201ENST00000617989 482 ntBASIC17.3■□□□□ 0.36
SLC1A3P43003 AC130371.2-201ENST00000619443 611 ntBASIC17.3■□□□□ 0.36
SLC1A3P43003 AC093525.10-201ENST00000625130 1569 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms