Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
KDM5CP41229 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC28.18■■■□□ 2.1
KDM5CP41229 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
KDM5CP41229 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC28.17■■■□□ 2.1
KDM5CP41229 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
KDM5CP41229 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
KDM5CP41229 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
KDM5CP41229 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC28.17■■■□□ 2.1
KDM5CP41229 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC28.17■■■□□ 2.1
KDM5CP41229 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC28.17■■■□□ 2.1
KDM5CP41229 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC28.17■■■□□ 2.1
KDM5CP41229 LINC01521-201ENST00000504184 1943 ntBASIC28.17■■■□□ 2.1
KDM5CP41229 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
KDM5CP41229 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC28.17■■■□□ 2.1
KDM5CP41229 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC28.17■■■□□ 2.1
KDM5CP41229 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC28.17■■■□□ 2.1
KDM5CP41229 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
KDM5CP41229 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
KDM5CP41229 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
KDM5CP41229 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
KDM5CP41229 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
KDM5CP41229 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
KDM5CP41229 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC28.16■■■□□ 2.1
KDM5CP41229 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC28.16■■■□□ 2.1
KDM5CP41229 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
KDM5CP41229 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC28.16■■■□□ 2.1
KDM5CP41229 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
KDM5CP41229 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC28.16■■■□□ 2.1
KDM5CP41229 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
KDM5CP41229 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC28.16■■■□□ 2.1
KDM5CP41229 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
KDM5CP41229 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
KDM5CP41229 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
KDM5CP41229 AC099778.1-201ENST00000568593 1911 ntBASIC28.16■■■□□ 2.1
KDM5CP41229 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
KDM5CP41229 KRT89P-201ENST00000620027 1478 ntBASIC28.16■■■□□ 2.1
KDM5CP41229 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
KDM5CP41229 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
KDM5CP41229 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
KDM5CP41229 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
KDM5CP41229 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC28.16■■■□□ 2.1
KDM5CP41229 MIR3180-4-201ENST00000582223 153 ntBASIC28.16■■■□□ 2.1
KDM5CP41229 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
KDM5CP41229 AC148477.8-201ENST00000624298 468 ntBASIC28.16■■■□□ 2.1
KDM5CP41229 ABBA01031661.1-201ENST00000634362 1253 ntBASIC28.16■■■□□ 2.1
KDM5CP41229 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC28.15■■■□□ 2.1
KDM5CP41229 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
KDM5CP41229 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
KDM5CP41229 AC008556.1-201ENST00000610908 2040 ntBASIC28.15■■■□□ 2.1
KDM5CP41229 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC28.15■■■□□ 2.1
KDM5CP41229 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC28.15■■■□□ 2.1
KDM5CP41229 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC28.15■■■□□ 2.1
KDM5CP41229 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC28.15■■■□□ 2.1
KDM5CP41229 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
KDM5CP41229 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
KDM5CP41229 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
KDM5CP41229 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
KDM5CP41229 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
KDM5CP41229 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC28.14■■■□□ 2.1
KDM5CP41229 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
KDM5CP41229 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC28.14■■■□□ 2.1
KDM5CP41229 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC28.14■■■□□ 2.1
KDM5CP41229 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
KDM5CP41229 AC092183.1-201ENST00000469884 875 ntBASIC28.14■■■□□ 2.1
KDM5CP41229 VENTXP7-201ENST00000475503 772 ntBASIC28.14■■■□□ 2.1
KDM5CP41229 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC28.14■■■□□ 2.09
KDM5CP41229 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC28.13■■■□□ 2.09
KDM5CP41229 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
KDM5CP41229 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC28.13■■■□□ 2.09
KDM5CP41229 MED22-202ENST00000371999 987 ntTSL 3 BASIC28.13■■■□□ 2.09
KDM5CP41229 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC28.13■■■□□ 2.09
KDM5CP41229 MIR1233-2-201ENST00000408138 82 ntBASIC28.13■■■□□ 2.09
KDM5CP41229 MIR1233-1-201ENST00000408722 82 ntBASIC28.13■■■□□ 2.09
KDM5CP41229 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC28.13■■■□□ 2.09
KDM5CP41229 AL031284.1-201ENST00000419297 478 ntBASIC28.13■■■□□ 2.09
KDM5CP41229 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.09
KDM5CP41229 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC28.13■■■□□ 2.09
KDM5CP41229 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
KDM5CP41229 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
KDM5CP41229 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
KDM5CP41229 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC28.13■■■□□ 2.09
KDM5CP41229 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC28.13■■■□□ 2.09
KDM5CP41229 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
KDM5CP41229 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC28.13■■■□□ 2.09
KDM5CP41229 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
KDM5CP41229 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
KDM5CP41229 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
KDM5CP41229 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC28.12■■■□□ 2.09
KDM5CP41229 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
KDM5CP41229 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC28.12■■■□□ 2.09
KDM5CP41229 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
KDM5CP41229 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
KDM5CP41229 NAT14-202ENST00000587400 416 ntTSL 5 BASIC28.12■■■□□ 2.09
KDM5CP41229 AC064862.7-201ENST00000604520 867 ntBASIC28.12■■■□□ 2.09
KDM5CP41229 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC28.12■■■□□ 2.09
KDM5CP41229 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
KDM5CP41229 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC28.12■■■□□ 2.09
KDM5CP41229 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
KDM5CP41229 AL512353.2-201ENST00000448759 1962 ntBASIC28.12■■■□□ 2.09
KDM5CP41229 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC28.12■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms