Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.6■□□□□ 0.41
CHMP24386 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CHMP24386 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CHMP24386 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP24386 KRT16P1-201ENST00000399124 1418 ntBASIC17.6■□□□□ 0.41
CHMP24386 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.6■□□□□ 0.41
CHMP24386 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP24386 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP24386 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.6■□□□□ 0.41
CHMP24386 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP24386 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP24386 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.6■□□□□ 0.41
CHMP24386 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP24386 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.6■□□□□ 0.41
CHMP24386 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP24386 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP24386 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CHMP24386 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP24386 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP24386 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP24386 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.59■□□□□ 0.41
CHMP24386 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP24386 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP24386 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.59■□□□□ 0.41
CHMP24386 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP24386 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.59■□□□□ 0.41
CHMP24386 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP24386 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP24386 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP24386 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP24386 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP24386 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
CHMP24386 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP24386 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP24386 AL355355.2-201ENST00000442321 338 ntBASIC17.59■□□□□ 0.41
CHMP24386 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.59■□□□□ 0.41
CHMP24386 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP24386 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.59■□□□□ 0.41
CHMP24386 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.59■□□□□ 0.41
CHMP24386 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.59■□□□□ 0.41
CHMP24386 AC026471.5-201ENST00000615068 467 ntBASIC17.59■□□□□ 0.41
CHMP24386 AC018470.1-201ENST00000624790 3129 ntBASIC17.59■□□□□ 0.41
CHMP24386 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP24386 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CHMP24386 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP24386 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP24386 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP24386 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP24386 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHMP24386 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CHMP24386 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.58■□□□□ 0.41
CHMP24386 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
CHMP24386 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHMP24386 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CHMP24386 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CHMP24386 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CHMP24386 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHMP24386 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHMP24386 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHMP24386 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHMP24386 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.58■□□□□ 0.4
CHMP24386 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
CHMP24386 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.58■□□□□ 0.4
CHMP24386 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.58■□□□□ 0.4
CHMP24386 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.58■□□□□ 0.4
CHMP24386 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
CHMP24386 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.58■□□□□ 0.4
CHMP24386 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHMP24386 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.58■□□□□ 0.4
CHMP24386 CR392000.1-201ENST00000624770 1228 ntBASIC17.58■□□□□ 0.4
CHMP24386 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.58■□□□□ 0.4
CHMP24386 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.58■□□□□ 0.4
CHMP24386 AL512353.2-201ENST00000448759 1962 ntBASIC17.58■□□□□ 0.4
CHMP24386 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHMP24386 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHMP24386 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP24386 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
CHMP24386 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP24386 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP24386 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP24386 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP24386 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP24386 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP24386 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP24386 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CHMP24386 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.57■□□□□ 0.4
CHMP24386 SDHAP1-207ENST00000440850 2000 ntBASIC17.57■□□□□ 0.4
CHMP24386 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP24386 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.57■□□□□ 0.4
CHMP24386 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP24386 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP24386 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP24386 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CHMP24386 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CHMP24386 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP24386 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP24386 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP24386 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP24386 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.57■□□□□ 0.4
CHMP24386 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms