Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
XPAP23025 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.99■□□□□ 0.63
XPAP23025 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.99■□□□□ 0.63
XPAP23025 FP475955.4-201ENST00000623131 1990 ntBASIC18.99■□□□□ 0.63
XPAP23025 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
XPAP23025 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
XPAP23025 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
XPAP23025 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
XPAP23025 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
XPAP23025 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
XPAP23025 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
XPAP23025 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.98■□□□□ 0.63
XPAP23025 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.98■□□□□ 0.63
XPAP23025 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
XPAP23025 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
XPAP23025 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
XPAP23025 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
XPAP23025 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
XPAP23025 BX664615.1-201ENST00000443558 458 ntBASIC18.98■□□□□ 0.63
XPAP23025 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
XPAP23025 AL049597.2-201ENST00000565575 961 ntBASIC18.98■□□□□ 0.63
XPAP23025 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.98■□□□□ 0.63
XPAP23025 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.98■□□□□ 0.63
XPAP23025 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
XPAP23025 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
XPAP23025 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
XPAP23025 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.98■□□□□ 0.63
XPAP23025 KRT8P3-201ENST00000519669 1449 ntBASIC18.98■□□□□ 0.63
XPAP23025 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
XPAP23025 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
XPAP23025 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.98■□□□□ 0.63
XPAP23025 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
XPAP23025 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
XPAP23025 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
XPAP23025 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.97■□□□□ 0.63
XPAP23025 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
XPAP23025 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
XPAP23025 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
XPAP23025 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
XPAP23025 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
XPAP23025 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
XPAP23025 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
XPAP23025 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.97■□□□□ 0.63
XPAP23025 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
XPAP23025 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.97■□□□□ 0.63
XPAP23025 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.97■□□□□ 0.63
XPAP23025 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
XPAP23025 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.97■□□□□ 0.63
XPAP23025 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.97■□□□□ 0.63
XPAP23025 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
XPAP23025 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.97■□□□□ 0.63
XPAP23025 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.97■□□□□ 0.63
XPAP23025 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.97■□□□□ 0.63
XPAP23025 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.97■□□□□ 0.63
XPAP23025 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.97■□□□□ 0.63
XPAP23025 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
XPAP23025 AC073508.3-201ENST00000619697 1419 ntBASIC18.97■□□□□ 0.63
XPAP23025 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
XPAP23025 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
XPAP23025 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
XPAP23025 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
XPAP23025 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
XPAP23025 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
XPAP23025 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
XPAP23025 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
XPAP23025 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
XPAP23025 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
XPAP23025 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
XPAP23025 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.96■□□□□ 0.63
XPAP23025 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
XPAP23025 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
XPAP23025 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
XPAP23025 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
XPAP23025 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
XPAP23025 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
XPAP23025 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.96■□□□□ 0.63
XPAP23025 MCCD1P1-208ENST00000445732 328 ntBASIC18.96■□□□□ 0.63
XPAP23025 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
XPAP23025 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.96■□□□□ 0.63
XPAP23025 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
XPAP23025 AC141257.4-201ENST00000634557 245 ntBASIC18.96■□□□□ 0.63
XPAP23025 AC136944.6-201ENST00000634818 245 ntBASIC18.96■□□□□ 0.63
XPAP23025 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
XPAP23025 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
XPAP23025 KRT8P45-201ENST00000414328 1447 ntBASIC18.96■□□□□ 0.63
XPAP23025 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
XPAP23025 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.96■□□□□ 0.63
XPAP23025 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.96■□□□□ 0.63
XPAP23025 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
XPAP23025 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.96■□□□□ 0.63
XPAP23025 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
XPAP23025 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.96■□□□□ 0.63
XPAP23025 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
XPAP23025 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.96■□□□□ 0.63
XPAP23025 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
XPAP23025 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
XPAP23025 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
XPAP23025 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
XPAP23025 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
XPAP23025 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms