Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDH1P12830 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDH1P12830 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.36■□□□□ 0.53
CDH1P12830 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CDH1P12830 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH1P12830 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.36■□□□□ 0.53
CDH1P12830 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.36■□□□□ 0.53
CDH1P12830 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.36■□□□□ 0.53
CDH1P12830 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH1P12830 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.36■□□□□ 0.53
CDH1P12830 MIR4785-201ENST00000585005 73 ntBASIC18.36■□□□□ 0.53
CDH1P12830 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.36■□□□□ 0.53
CDH1P12830 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDH1P12830 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH1P12830 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDH1P12830 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH1P12830 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH1P12830 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDH1P12830 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
CDH1P12830 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CDH1P12830 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDH1P12830 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.35■□□□□ 0.53
CDH1P12830 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.35■□□□□ 0.53
CDH1P12830 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDH1P12830 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDH1P12830 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH1P12830 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH1P12830 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH1P12830 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH1P12830 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH1P12830 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CDH1P12830 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CDH1P12830 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.35■□□□□ 0.53
CDH1P12830 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.35■□□□□ 0.53
CDH1P12830 PRSS44-201ENST00000515154 1146 ntBASIC18.35■□□□□ 0.53
CDH1P12830 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.35■□□□□ 0.53
CDH1P12830 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.35■□□□□ 0.53
CDH1P12830 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.35■□□□□ 0.53
CDH1P12830 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.35■□□□□ 0.53
CDH1P12830 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH1P12830 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.35■□□□□ 0.53
CDH1P12830 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
CDH1P12830 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CDH1P12830 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CDH1P12830 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH1P12830 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH1P12830 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH1P12830 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CDH1P12830 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.34■□□□□ 0.53
CDH1P12830 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH1P12830 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH1P12830 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH1P12830 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDH1P12830 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
CDH1P12830 AC006333.2-201ENST00000607957 2099 ntBASIC18.34■□□□□ 0.53
CDH1P12830 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH1P12830 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.34■□□□□ 0.53
CDH1P12830 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH1P12830 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH1P12830 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH1P12830 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CDH1P12830 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH1P12830 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH1P12830 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH1P12830 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDH1P12830 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.34■□□□□ 0.53
CDH1P12830 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDH1P12830 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.34■□□□□ 0.53
CDH1P12830 MIR4497-201ENST00000583208 89 ntBASIC18.34■□□□□ 0.53
CDH1P12830 AP000692.2-201ENST00000608391 879 ntBASIC18.34■□□□□ 0.53
CDH1P12830 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.34■□□□□ 0.53
CDH1P12830 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.34■□□□□ 0.53
CDH1P12830 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH1P12830 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH1P12830 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDH1P12830 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH1P12830 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDH1P12830 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CDH1P12830 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CDH1P12830 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDH1P12830 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH1P12830 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.34■□□□□ 0.53
CDH1P12830 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH1P12830 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH1P12830 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH1P12830 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH1P12830 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDH1P12830 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDH1P12830 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDH1P12830 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.33■□□□□ 0.53
CDH1P12830 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDH1P12830 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.33■□□□□ 0.53
CDH1P12830 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
CDH1P12830 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDH1P12830 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.33■□□□□ 0.52
CDH1P12830 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CDH1P12830 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.33■□□□□ 0.52
CDH1P12830 CKBP1-201ENST00000565489 1086 ntBASIC18.33■□□□□ 0.52
CDH1P12830 SLC25A1P4-201ENST00000567977 778 ntBASIC18.33■□□□□ 0.52
CDH1P12830 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms