Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 AC097488.1-201ENST00000507834 756 ntBASIC19.84■□□□□ 0.77
KRT3P12035 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.84■□□□□ 0.77
KRT3P12035 AP003071.4-201ENST00000562276 1284 ntBASIC19.84■□□□□ 0.77
KRT3P12035 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT3P12035 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT3P12035 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT3P12035 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT3P12035 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.84■□□□□ 0.77
KRT3P12035 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KRT3P12035 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KRT3P12035 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.83■□□□□ 0.77
KRT3P12035 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.83■□□□□ 0.77
KRT3P12035 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KRT3P12035 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KRT3P12035 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
KRT3P12035 TSPY7P-201ENST00000431358 1114 ntBASIC19.83■□□□□ 0.77
KRT3P12035 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.83■□□□□ 0.77
KRT3P12035 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.83■□□□□ 0.77
KRT3P12035 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.83■□□□□ 0.77
KRT3P12035 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.83■□□□□ 0.77
KRT3P12035 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.83■□□□□ 0.77
KRT3P12035 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.83■□□□□ 0.77
KRT3P12035 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
KRT3P12035 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
KRT3P12035 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
KRT3P12035 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
KRT3P12035 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
KRT3P12035 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
KRT3P12035 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
KRT3P12035 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.83■□□□□ 0.76
KRT3P12035 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
KRT3P12035 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
KRT3P12035 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
KRT3P12035 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
KRT3P12035 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT3P12035 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT3P12035 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT3P12035 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.82■□□□□ 0.76
KRT3P12035 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KRT3P12035 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT3P12035 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KRT3P12035 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.82■□□□□ 0.76
KRT3P12035 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KRT3P12035 HEIH-201ENST00000623091 1652 ntBASIC19.82■□□□□ 0.76
KRT3P12035 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT3P12035 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
KRT3P12035 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
KRT3P12035 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.82■□□□□ 0.76
KRT3P12035 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KRT3P12035 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT3P12035 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.82■□□□□ 0.76
KRT3P12035 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.82■□□□□ 0.76
KRT3P12035 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.82■□□□□ 0.76
KRT3P12035 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.82■□□□□ 0.76
KRT3P12035 MFAP1P1-201ENST00000442257 1255 ntBASIC19.82■□□□□ 0.76
KRT3P12035 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.82■□□□□ 0.76
KRT3P12035 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.82■□□□□ 0.76
KRT3P12035 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.82■□□□□ 0.76
KRT3P12035 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT3P12035 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KRT3P12035 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KRT3P12035 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT3P12035 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT3P12035 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT3P12035 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
KRT3P12035 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.82■□□□□ 0.76
KRT3P12035 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.82■□□□□ 0.76
KRT3P12035 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
KRT3P12035 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.82■□□□□ 0.76
KRT3P12035 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.82■□□□□ 0.76
KRT3P12035 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
KRT3P12035 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
KRT3P12035 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.81■□□□□ 0.76
KRT3P12035 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT3P12035 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
KRT3P12035 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
KRT3P12035 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.81■□□□□ 0.76
KRT3P12035 KRT8P32-201ENST00000512863 1461 ntBASIC19.81■□□□□ 0.76
KRT3P12035 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.81■□□□□ 0.76
KRT3P12035 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT3P12035 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT3P12035 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT3P12035 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
KRT3P12035 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
KRT3P12035 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.81■□□□□ 0.76
KRT3P12035 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.81■□□□□ 0.76
KRT3P12035 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.81■□□□□ 0.76
KRT3P12035 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.81■□□□□ 0.76
KRT3P12035 MIR4785-201ENST00000585005 73 ntBASIC19.81■□□□□ 0.76
KRT3P12035 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.81■□□□□ 0.76
KRT3P12035 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.81■□□□□ 0.76
KRT3P12035 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.81■□□□□ 0.76
KRT3P12035 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.81■□□□□ 0.76
KRT3P12035 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT3P12035 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT3P12035 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.81■□□□□ 0.76
KRT3P12035 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT3P12035 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT3P12035 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT3P12035 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms