Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.72□□□□□ -0.05
CD28P10747 LINC01311-201ENST00000565162 1445 ntBASIC14.72□□□□□ -0.05
CD28P10747 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC14.72□□□□□ -0.05
CD28P10747 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC14.72□□□□□ -0.05
CD28P10747 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD28P10747 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CD28P10747 GPAT2P1-201ENST00000444924 1672 ntBASIC14.71□□□□□ -0.05
CD28P10747 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC14.71□□□□□ -0.05
CD28P10747 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CD28P10747 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
CD28P10747 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC14.71□□□□□ -0.05
CD28P10747 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CD28P10747 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CD28P10747 ILF2-202ENST00000368681 726 ntTSL 2 BASIC14.71□□□□□ -0.05
CD28P10747 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CD28P10747 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.71□□□□□ -0.05
CD28P10747 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CD28P10747 ZNF444P1-201ENST00000559497 298 ntBASIC14.71□□□□□ -0.05
CD28P10747 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.71□□□□□ -0.05
CD28P10747 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CD28P10747 AC083849.1-201ENST00000615227 514 ntBASIC14.71□□□□□ -0.05
CD28P10747 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CD28P10747 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CD28P10747 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CD28P10747 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CD28P10747 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC14.71□□□□□ -0.05
CD28P10747 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
CD28P10747 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CD28P10747 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.06
CD28P10747 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
CD28P10747 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC14.71□□□□□ -0.06
CD28P10747 GOLGA6L5P-202ENST00000515341 1828 ntBASIC14.71□□□□□ -0.06
CD28P10747 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CD28P10747 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC14.71□□□□□ -0.06
CD28P10747 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
CD28P10747 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CD28P10747 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CD28P10747 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
CD28P10747 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD28P10747 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CD28P10747 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
CD28P10747 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD28P10747 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CD28P10747 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CD28P10747 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.7□□□□□ -0.06
CD28P10747 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC14.7□□□□□ -0.06
CD28P10747 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
CD28P10747 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC14.7□□□□□ -0.06
CD28P10747 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD28P10747 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD28P10747 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CD28P10747 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CD28P10747 PWWP2AP1-201ENST00000429776 2273 ntBASIC14.7□□□□□ -0.06
CD28P10747 BET1L-202ENST00000332865 533 ntTSL 5 BASIC14.7□□□□□ -0.06
CD28P10747 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CD28P10747 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
CD28P10747 FXN-203ENST00000396366 922 ntTSL 2 BASIC14.7□□□□□ -0.06
CD28P10747 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CD28P10747 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.7□□□□□ -0.06
CD28P10747 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.7□□□□□ -0.06
CD28P10747 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14.7□□□□□ -0.06
CD28P10747 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.7□□□□□ -0.06
CD28P10747 PTK2-216ENST00000519881 863 ntTSL 3 BASIC14.7□□□□□ -0.06
CD28P10747 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD28P10747 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CD28P10747 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD28P10747 AC116407.4-201ENST00000623319 1061 ntBASIC14.7□□□□□ -0.06
CD28P10747 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD28P10747 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC14.7□□□□□ -0.06
CD28P10747 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC14.7□□□□□ -0.06
CD28P10747 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CD28P10747 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD28P10747 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD28P10747 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC14.7□□□□□ -0.06
CD28P10747 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CD28P10747 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD28P10747 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CD28P10747 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CD28P10747 GAS2L1P1-201ENST00000420145 1480 ntBASIC14.69□□□□□ -0.06
CD28P10747 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC14.69□□□□□ -0.06
CD28P10747 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD28P10747 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD28P10747 PCDHAC2-203ENST00000615316 3011 ntBASIC14.69□□□□□ -0.06
CD28P10747 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD28P10747 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD28P10747 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC14.69□□□□□ -0.06
CD28P10747 AC036111.1-201ENST00000533973 1582 ntBASIC14.69□□□□□ -0.06
CD28P10747 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC14.69□□□□□ -0.06
CD28P10747 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD28P10747 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD28P10747 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD28P10747 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CD28P10747 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CD28P10747 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
CD28P10747 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CD28P10747 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD28P10747 AL023284.2-201ENST00000405850 579 ntBASIC14.69□□□□□ -0.06
CD28P10747 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CD28P10747 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC14.69□□□□□ -0.06
CD28P10747 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms